Cow genome map

Conread name: Pig1-87J20

Conread position: 1-227
Cow position: chr2:14824931-14825160 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 187

Conread position: 1-348
Cow position: chr2:29217638-29217995 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 135

Conread position: 1-359
Cow position: chr2:81414550-81414920 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 76, 144

Conread position: 1-380
Cow position: chr2:29106143-29106534 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 144

Conread position: 1-386
Cow position: chr2:46453852-46453477 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 245
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 19

Conread position: 1-396
Cow position: chr2:4452287-4452693 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 144

Conread position: 1-412
Cow position: chr2:41182028-41182434 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 141

Conread position: 1-460
Cow position: chr2:11694347-11694816 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 145

Conread position: 1-463
Cow position: chr2:11500901-11501348 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 1-463
Cow position: chr2:73194900-73195373 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 1-478
Cow position: chr2:43106247-43106736 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 148

Conread position: 1-478
Cow position: chr2:63289997-63289522 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 1-479
Cow position: chr2:59411823-59411334 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 217

Conread position: 1-483
Cow position: chr2:3622444-3622932 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 133

Conread position: 1-483
Cow position: chr2:4181198-4180705 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 144

Conread position: 1-487
Cow position: chr2:22079832-22080325 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 43

Conread position: 1-488
Cow position: chr2:2182352-2181855 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 1-488
Cow position: chr2:8120620-8121110 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 1-489
Cow position: chr2:2456582-2456083 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 201

Conread position: 1-489
Cow position: chr2:4401494-4401000 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 164

Conread position: 1-489
Cow position: chr2:8106344-8106843 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 144

Conread position: 1-489
Cow position: chr2:9909910-9910408 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 398

Conread position: 1-489
Cow position: chr2:10184311-10183813 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 128

Conread position: 1-489
Cow position: chr2:12222363-12221867 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 85

Conread position: 1-489
Cow position: chr2:12285130-12285625 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 144

Conread position: 1-489
Cow position: chr2:13068084-13067590 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 198

Conread position: 1-489
Cow position: chr2:14208915-14208419 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 121

Conread position: 1-489
Cow position: chr2:24927330-24927828 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 1-489
Cow position: chr2:28647701-28647209 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 1-489
Cow position: chr2:28795761-28796260 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 1-489
Cow position: chr2:31408425-31407930 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 164

Conread position: 1-489
Cow position: chr2:31455354-31455836 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 101

Conread position: 1-489
Cow position: chr2:32433418-32432919 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 18

Conread position: 1-489
Cow position: chr2:33081835-33081352 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 144

Conread position: 1-489
Cow position: chr2:39423849-39424347 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 217

Conread position: 1-489
Cow position: chr2:40455150-40455624 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 1-489
Cow position: chr2:41047332-41046837 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 1-489
Cow position: chr2:41156109-41156592 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 321
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 75, 128

Conread position: 1-489
Cow position: chr2:42668786-42668291 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 213

Conread position: 1-489
Cow position: chr2:43757721-43757227 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 396

Conread position: 1-489
Cow position: chr2:44093284-44093782 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 1-489
Cow position: chr2:46183618-46183120 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 1-489
Cow position: chr2:49302098-49301606 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 144

Conread position: 1-489
Cow position: chr2:52498159-52497660 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 1-489
Cow position: chr2:52620694-52621191 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 217

Conread position: 1-489
Cow position: chr2:53331720-53332218 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 1-489
Cow position: chr2:53541858-53542355 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 164

Conread position: 1-489
Cow position: chr2:54739404-54739900 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 164

Conread position: 1-489
Cow position: chr2:57337876-57338372 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 1-489
Cow position: chr2:62730442-62730941 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 1-490
Cow position: chr2:24687599-24688096 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 164

Conread position: 1-494
Cow position: chr2:44477527-44478029 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 68

Conread position: 1-494
Cow position: chr2:55482273-55481790 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 1-496
Cow position: chr2:48359870-48360361 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 12

Conread position: 1-497
Cow position: chr2:16306004-16306497 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 322
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 26

Conread position: 1-497
Cow position: chr2:16320848-16321352 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 167

Conread position: 1-497
Cow position: chr2:29967902-29968410 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 144

Conread position: 1-497
Cow position: chr2:34470953-34470451 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 188

Conread position: 1-498
Cow position: chr2:32410320-32409819 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 3-488
Cow position: chr2:49629245-49629740 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 142

Conread position: 3-489
Cow position: chr2:72738685-72738204 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 4-490
Cow position: chr2:53004278-53003785 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 141

Conread position: 5-483
Cow position: chr2:74859904-74860379 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 75

Conread position: 7-275
Cow position: chr2:2410883-2410606 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 7-489
Cow position: chr2:77858260-77858745 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 208

Conread position: 10-387
Cow position: chr2:9188137-9187748 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 66, 143

Conread position: 14-489
Cow position: chr2:12594907-12595393 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 77

Conread position: 14-489
Cow position: chr2:12695742-12695263 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 131

Conread position: 14-489
Cow position: chr2:50061067-50060581 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 131

Conread position: 15-487
Cow position: chr2:32457135-32456662 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 202

Conread position: 15-497
Cow position: chr2:50405923-50406397 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 121

Conread position: 40-487
Cow position: chr2:15750275-15750712 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 101

Conread position: 45-488
Cow position: chr2:44058066-44057618 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 48-452
Cow position: chr2:2896671-2896266 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 258
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 98

Conread position: 82-483
Cow position: chr2:39115806-39116206 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 83

Conread position: 82-497
Cow position: chr2:10742119-10741716 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 50

Show alignments to all cow chromosomes.