Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-237 |
| Cow position: | chr21:38024644-38024875 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 194, 11 |
| Conread position: | 1-239 |
| Cow position: | chr21:33317956-33317709 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-240 |
| Cow position: | chr21:49662895-49663126 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-246 |
| Cow position: | chr21:34902834-34902585 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 181 |
| Conread position: | 1-344 |
| Cow position: | chr21:29002768-29002423 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 1-366 |
| Cow position: | chr21:7154882-7155254 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 1-377 |
| Cow position: | chr21:28987686-28988061 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 140 |
| Conread position: | 1-416 |
| Cow position: | chr21:39225508-39225087 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 1-418 |
| Cow position: | chr21:41765-42191 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 222 |
| Conread position: | 1-444 |
| Cow position: | chr21:20742119-20741693 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 1-451 |
| Cow position: | chr21:29909764-29909312 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 193 |
| Conread position: | 1-465 |
| Cow position: | chr21:4481844-4482319 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 201 |
| Conread position: | 1-476 |
| Cow position: | chr21:37373774-37374258 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 1-487 |
| Cow position: | chr21:21171752-21171265 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 1-488 |
| Cow position: | chr21:4078595-4079087 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-489 |
| Cow position: | chr21:148695-149194 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 1-489 |
| Cow position: | chr21:7063122-7062635 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 1-489 |
| Cow position: | chr21:15398428-15397929 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr21:17143224-17143724 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 1-489 |
| Cow position: | chr21:27149008-27148507 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 154 |
| Conread position: | 1-489 |
| Cow position: | chr21:32397503-32397002 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 186 |
| Conread position: | 1-489 |
| Cow position: | chr21:33256102-33256600 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 217 |
| Conread position: | 1-489 |
| Cow position: | chr21:36375536-36376034 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 1-489 |
| Cow position: | chr21:41797175-41796676 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-494 |
| Cow position: | chr21:31251556-31252052 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 1-496 |
| Cow position: | chr21:24948653-24949168 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 145 |
| Conread position: | 1-497 |
| Cow position: | chr21:2513399-2513903 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 212 |
| Conread position: | 1-498 |
| Cow position: | chr21:49297373-49297882 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 246 |
| Conread position: | 1-499 |
| Cow position: | chr21:21051278-21051784 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 215 |
| Conread position: | 1-499 |
| Cow position: | chr21:22462742-22463244 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 2-495 |
| Cow position: | chr21:33984749-33984237 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 175 |
| Conread position: | 7-488 |
| Cow position: | chr21:10852819-10853309 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 7-488 |
| Cow position: | chr21:44531753-44532227 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 7-489 |
| Cow position: | chr21:44763408-44762917 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 7-497 |
| Cow position: | chr21:46975510-46975031 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 10-489 |
| Cow position: | chr21:6966910-6966428 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 14-275 |
| Cow position: | chr21:48529861-48529591 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 14-489 |
| Cow position: | chr21:42916354-42916838 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 14-497 |
| Cow position: | chr21:26700104-26699613 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 15-489 |
| Cow position: | chr21:47647897-47648384 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 386 |
| Conread position: | 15-498 |
| Cow position: | chr21:3587491-3587017 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 16 |
| Conread position: | 16-495 |
| Cow position: | chr21:36978341-36977861 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 125 |
| Conread position: | 43-333 |
| Cow position: | chr21:17224253-17223955 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 43-498 |
| Cow position: | chr21:4566595-4567044 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 56-489 |
| Cow position: | chr21:33947835-33948266 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
Show alignments to all cow chromosomes.