Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-274 |
| Cow position: | chr29:36208171-36208445 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 70, 181 |
| Conread position: | 1-275 |
| Cow position: | chr29:5390224-5390502 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 76, 96 |
| Conread position: | 1-294 |
| Cow position: | chr29:2415693-2415391 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 1-369 |
| Cow position: | chr29:19889960-19890336 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 1-404 |
| Cow position: | chr29:4518287-4518694 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 148 |
| Conread position: | 1-447 |
| Cow position: | chr29:16689218-16689670 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 1-453 |
| Cow position: | chr29:5785196-5785659 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-461 |
| Cow position: | chr29:27977437-27976972 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 1-475 |
| Cow position: | chr29:7428728-7428247 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 59 |
| Conread position: | 1-482 |
| Cow position: | chr29:14453679-14454149 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 76, 183 |
| Conread position: | 1-484 |
| Cow position: | chr29:2102229-2102724 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-487 |
| Cow position: | chr29:31095204-31094706 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-488 |
| Cow position: | chr29:27260738-27260234 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:107444-107936 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 1-489 |
| Cow position: | chr29:408875-408380 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr29:608245-607755 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 163 |
| Conread position: | 1-489 |
| Cow position: | chr29:667024-666525 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:2692833-2693327 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 213 |
| Conread position: | 1-489 |
| Cow position: | chr29:6263617-6263125 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:7846778-7847271 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-489 |
| Cow position: | chr29:8624809-8624314 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 213 |
| Conread position: | 1-489 |
| Cow position: | chr29:14374269-14373794 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 1-489 |
| Cow position: | chr29:15967170-15966671 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:16037030-16036535 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:19620883-19620386 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 1-489 |
| Cow position: | chr29:19656287-19656782 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr29:21430469-21429975 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 1-489 |
| Cow position: | chr29:25930133-25929637 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr29:31764426-31764922 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 216 |
| Conread position: | 1-489 |
| Cow position: | chr29:32514711-32515207 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 112 |
| Conread position: | 1-489 |
| Cow position: | chr29:35274636-35274147 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr29:35299303-35299802 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr29:39077331-39076836 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 215 |
| Conread position: | 1-489 |
| Cow position: | chr29:42256591-42256096 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 143 |
| Conread position: | 1-497 |
| Cow position: | chr29:17407522-17408020 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-497 |
| Cow position: | chr29:32288767-32289282 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 336 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-497 |
| Cow position: | chr29:43256022-43255516 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 1-498 |
| Cow position: | chr29:32961701-32962206 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 3-275 |
| Cow position: | chr29:17343135-17343422 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 7-395 |
| Cow position: | chr29:32807120-32806745 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 158, 96 |
| Conread position: | 7-488 |
| Cow position: | chr29:45461623-45462114 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 7-489 |
| Cow position: | chr29:15995989-15995500 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 7-489 |
| Cow position: | chr29:21226370-21226859 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 158 |
| Conread position: | 7-489 |
| Cow position: | chr29:30107240-30106763 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 14-478 |
| Cow position: | chr29:131920-132389 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 14-497 |
| Cow position: | chr29:45206908-45207403 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 139 |
| Conread position: | 15-428 |
| Cow position: | chr29:530001-529578 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 381 |
| Conread position: | 15-499 |
| Cow position: | chr29:20465697-20466187 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 90 |
| Conread position: | 26-398 |
| Cow position: | chr29:32804927-32805304 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 40-435 |
| Cow position: | chr29:1217148-1217550 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 58-489 |
| Cow position: | chr29:2299868-2299434 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 42 |
Show alignments to all cow chromosomes.