Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-135 |
| Cow position: | chr8:8283583-8283450 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-260 |
| Cow position: | chr8:45793130-45792864 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-272 |
| Cow position: | chr8:12663329-12663052 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 183 |
| Conread position: | 1-275 |
| Cow position: | chr8:11240677-11240394 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 1-329 |
| Cow position: | chr8:17382495-17382154 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 217 |
| Conread position: | 1-390 |
| Cow position: | chr8:29628993-29628592 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-418 |
| Cow position: | chr8:1109810-1110241 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-424 |
| Cow position: | chr8:46801295-46800859 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 156 |
| Conread position: | 1-429 |
| Cow position: | chr8:24869879-24869439 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 193 |
| Conread position: | 1-461 |
| Cow position: | chr8:8515464-8514994 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 135 |
| Conread position: | 1-478 |
| Cow position: | chr8:25847262-25846778 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 154 |
| Conread position: | 1-484 |
| Cow position: | chr8:12312267-12311773 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 217 |
| Conread position: | 1-488 |
| Cow position: | chr8:1501662-1501167 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 1-488 |
| Cow position: | chr8:25774022-25773522 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 1-488 |
| Cow position: | chr8:45069557-45070047 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 1-489 |
| Cow position: | chr8:1346339-1345847 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-489 |
| Cow position: | chr8:1467745-1468242 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:1569740-1570239 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:3333646-3334149 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 156 |
| Conread position: | 1-489 |
| Cow position: | chr8:5680541-5680065 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 1-489 |
| Cow position: | chr8:6203665-6203170 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-489 |
| Cow position: | chr8:6465496-6465994 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:8913343-8913841 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 1-489 |
| Cow position: | chr8:9738153-9738638 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 1-489 |
| Cow position: | chr8:10750962-10751464 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:12451672-12452171 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr8:19333193-19333692 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 1-489 |
| Cow position: | chr8:21091714-21091215 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 217 |
| Conread position: | 1-489 |
| Cow position: | chr8:26877865-26878366 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:29919363-29918868 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 39 |
| Conread position: | 1-489 |
| Cow position: | chr8:30156722-30157218 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 216 |
| Conread position: | 1-489 |
| Cow position: | chr8:32435228-32434729 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 1-489 |
| Cow position: | chr8:32629388-32628894 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 84 |
| Conread position: | 1-489 |
| Cow position: | chr8:35129177-35128678 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 1-489 |
| Cow position: | chr8:51207721-51207236 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-489 |
| Cow position: | chr8:52860869-52861365 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 267 |
| Conread position: | 1-489 |
| Cow position: | chr8:58855307-58855798 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 1-489 |
| Cow position: | chr8:60066496-60066996 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 161 |
| Conread position: | 1-496 |
| Cow position: | chr8:32649321-32649811 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 177 |
| Conread position: | 1-497 |
| Cow position: | chr8:49285443-49284937 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-498 |
| Cow position: | chr8:46216990-46216476 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 1-499 |
| Cow position: | chr8:24230050-24230559 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 2-443 |
| Cow position: | chr8:18684666-18684231 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 73, 151 |
| Conread position: | 2-476 |
| Cow position: | chr8:41970441-41969960 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 2-488 |
| Cow position: | chr8:38088605-38089091 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 54 |
| Conread position: | 7-489 |
| Cow position: | chr8:42486534-42487025 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 7-490 |
| Cow position: | chr8:7163978-7164465 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 211 |
| Conread position: | 14-489 |
| Cow position: | chr8:5244778-5244301 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 175 |
| Conread position: | 14-489 |
| Cow position: | chr8:24888551-24889007 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 14-489 |
| Cow position: | chr8:44241058-44240573 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 82 |
| Conread position: | 15-406 |
| Cow position: | chr8:18209533-18209123 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 171 |
| Conread position: | 15-489 |
| Cow position: | chr8:14589238-14588756 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 17-414 |
| Cow position: | chr8:49414706-49415110 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 18-488 |
| Cow position: | chr8:27154495-27154016 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 127 |
| Conread position: | 23-487 |
| Cow position: | chr8:44109711-44110187 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 25-498 |
| Cow position: | chr8:53837583-53838057 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 27-335 |
| Cow position: | chr8:49692894-49692570 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 33-353 |
| Cow position: | chr8:34406193-34406521 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 33-379 |
| Cow position: | chr8:38575300-38574975 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 33-490 |
| Cow position: | chr8:55302566-55303016 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 40-493 |
| Cow position: | chr8:33691653-33692091 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 149 |
| Conread position: | 62-484 |
| Cow position: | chr8:36310365-36309937 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 62-489 |
| Cow position: | chr8:18484447-18484882 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 230 |
| Conread position: | 62-498 |
| Cow position: | chr8:12070589-12071016 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 183, 122 |
| Conread position: | 74-488 |
| Cow position: | chr8:32927632-32927210 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 75-497 |
| Cow position: | chr8:43476009-43476422 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 57 |
Show alignments to all cow chromosomes.