Cow genome map
| Conread name: | Pig1-92K11 |
| Conread position: | 1-92 |
| Cow position: | chr13:26507795-26507886 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-99 |
| Cow position: | chr13:25206974-25207072 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr13:22082250-22082374 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-126 |
| Cow position: | chr13:11463489-11463367 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-126 |
| Cow position: | chr13:17991519-17991644 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:55592174-55592049 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-128 |
| Cow position: | chr13:55618255-55618130 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-146 |
| Cow position: | chr13:26508344-26508489 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-147 |
| Cow position: | chr13:16952331-16952477 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-149 |
| Cow position: | chr13:14099252-14099103 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-153 |
| Cow position: | chr13:40464090-40464243 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-153 |
| Cow position: | chr13:54815051-54814897 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr13:58621084-58620927 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 1-163 |
| Cow position: | chr13:20156347-20156506 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-170 |
| Cow position: | chr13:32657237-32657411 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 1-187 |
| Cow position: | chr13:18761868-18761684 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-189 |
| Cow position: | chr13:52748934-52748746 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-189 |
| Cow position: | chr13:52966738-52966923 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 1-191 |
| Cow position: | chr13:53788248-53788053 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 1-192 |
| Cow position: | chr13:15091049-15090855 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 1-192 |
| Cow position: | chr13:30271184-30271377 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 1-192 |
| Cow position: | chr13:58347946-58348131 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-193 |
| Cow position: | chr13:34664991-34665183 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 1-193 |
| Cow position: | chr13:54969945-54969748 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 1-217 |
| Cow position: | chr13:33955165-33954950 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 145 |
| Conread position: | 1-218 |
| Cow position: | chr13:49200496-49200717 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-224 |
| Cow position: | chr13:54470877-54471098 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 1-231 |
| Cow position: | chr13:18550865-18551089 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 194, 152 |
| Conread position: | 1-240 |
| Cow position: | chr13:32167450-32167214 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 29 |
| Conread position: | 1-240 |
| Cow position: | chr13:43155995-43155759 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 92, 146 |
| Conread position: | 1-240 |
| Cow position: | chr13:43167171-43166930 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 92, 145 |
| Conread position: | 1-248 |
| Cow position: | chr13:13446291-13446053 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 1-248 |
| Cow position: | chr13:16327531-16327769 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 191, 16 |
| Conread position: | 1-248 |
| Cow position: | chr13:22075531-22075784 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-251 |
| Cow position: | chr13:62169682-62169433 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 157, 29 |
| Conread position: | 1-254 |
| Cow position: | chr13:33161133-33160877 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 1-259 |
| Cow position: | chr13:6621731-6621478 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 1-259 |
| Cow position: | chr13:10932416-10932670 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 1-259 |
| Cow position: | chr13:11768184-11767920 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 151 |
| Conread position: | 1-259 |
| Cow position: | chr13:12233593-12233336 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 154 |
| Conread position: | 1-259 |
| Cow position: | chr13:24280117-24280364 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 1-259 |
| Cow position: | chr13:29814411-29814668 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 175, 30 |
| Conread position: | 1-260 |
| Cow position: | chr13:9802928-9803194 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 1-260 |
| Cow position: | chr13:14717478-14717214 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 1-260 |
| Cow position: | chr13:34995469-34995206 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 236 |
| Conread position: | 1-260 |
| Cow position: | chr13:49847786-49848044 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 1-261 |
| Cow position: | chr13:11834619-11834350 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 1-261 |
| Cow position: | chr13:32718003-32717751 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 1-262 |
| Cow position: | chr13:661776-661512 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 1-262 |
| Cow position: | chr13:6759930-6759668 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 1-262 |
| Cow position: | chr13:7010333-7010590 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 57 |
| Conread position: | 1-262 |
| Cow position: | chr13:8245471-8245211 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 1-262 |
| Cow position: | chr13:9125531-9125795 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 63 |
| Conread position: | 1-262 |
| Cow position: | chr13:14220357-14220598 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-262 |
| Cow position: | chr13:16343553-16343809 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 1-262 |
| Cow position: | chr13:20180276-20180542 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 1-262 |
| Cow position: | chr13:25537484-25537757 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 1-262 |
| Cow position: | chr13:32773218-32773490 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 1-262 |
| Cow position: | chr13:34761545-34761800 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 16 |
| Conread position: | 1-262 |
| Cow position: | chr13:37558144-37558404 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 36 |
| Conread position: | 1-262 |
| Cow position: | chr13:46284748-46284491 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 90 |
| Conread position: | 1-262 |
| Cow position: | chr13:46430443-46430176 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 1-262 |
| Cow position: | chr13:56674111-56673842 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 131 |
| Conread position: | 1-263 |
| Cow position: | chr13:25435263-25434994 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 1-265 |
| Cow position: | chr13:46501182-46501431 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 194, 49 |
| Conread position: | 1-266 |
| Cow position: | chr13:13578174-13577901 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 1-266 |
| Cow position: | chr13:47188299-47188573 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 1-279 |
| Cow position: | chr13:12745532-12745812 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 2-104 |
| Cow position: | chr13:46394428-46394530 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-111 |
| Cow position: | chr13:37435182-37435288 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2-150 |
| Cow position: | chr13:46353652-46353509 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 2-153 |
| Cow position: | chr13:32904640-32904795 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-164 |
| Cow position: | chr13:17796229-17796395 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 2-175 |
| Cow position: | chr13:38631717-38631539 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-177 |
| Cow position: | chr13:33346997-33347165 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-187 |
| Cow position: | chr13:23265594-23265782 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 141 |
| Conread position: | 2-217 |
| Cow position: | chr13:35564173-35564377 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 185, 62 |
| Conread position: | 2-253 |
| Cow position: | chr13:21628019-21627760 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 47 |
| Conread position: | 2-259 |
| Cow position: | chr13:1958869-1959129 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 97, 238 |
| Conread position: | 2-260 |
| Cow position: | chr13:30509925-30510178 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 193, 64 |
| Conread position: | 2-261 |
| Cow position: | chr13:38898378-38898127 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 2-262 |
| Cow position: | chr13:3016312-3016044 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 105, 147 |
| Conread position: | 2-262 |
| Cow position: | chr13:12521917-12521653 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 2-262 |
| Cow position: | chr13:17346671-17346930 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 2-262 |
| Cow position: | chr13:54865145-54864907 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 193, 15 |
| Conread position: | 3-259 |
| Cow position: | chr13:50739031-50739288 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 153 |
| Conread position: | 3-262 |
| Cow position: | chr13:22887127-22886869 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 141 |
| Conread position: | 4-144 |
| Cow position: | chr13:29820343-29820199 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-239 |
| Cow position: | chr13:17886381-17886609 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 191, 60 |
| Conread position: | 4-260 |
| Cow position: | chr13:33281869-33282133 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 89, 103 |
| Conread position: | 4-261 |
| Cow position: | chr13:9664924-9665189 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 5-245 |
| Cow position: | chr13:54080950-54080705 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 180 |
| Conread position: | 5-261 |
| Cow position: | chr13:35719273-35719017 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 207 |
| Conread position: | 7-187 |
| Cow position: | chr13:3212440-3212262 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 141 |
| Conread position: | 7-262 |
| Cow position: | chr13:52284682-52284934 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 8-262 |
| Cow position: | chr13:3796011-3796266 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 8-262 |
| Cow position: | chr13:24539377-24539617 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 187, 50 |
| Conread position: | 8-262 |
| Cow position: | chr13:41359632-41359874 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 187, 16 |
| Conread position: | 9-261 |
| Cow position: | chr13:33975299-33975541 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 186, 82 |
| Conread position: | 10-262 |
| Cow position: | chr13:55843355-55843608 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 79 |
| Conread position: | 10-263 |
| Cow position: | chr13:32657931-32657670 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 12-194 |
| Cow position: | chr13:60651034-60650848 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 13-193 |
| Cow position: | chr13:17350227-17350407 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 13-261 |
| Cow position: | chr13:35654218-35653968 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 76 |
| Conread position: | 13-262 |
| Cow position: | chr13:6974034-6974288 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 13-262 |
| Cow position: | chr13:20834972-20834732 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 231, 76 |
| Conread position: | 13-262 |
| Cow position: | chr13:23270333-23270086 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 13-281 |
| Cow position: | chr13:12324057-12324326 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 13-289 |
| Cow position: | chr13:11591623-11591900 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 15-262 |
| Cow position: | chr13:15945355-15945603 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 54, 184 |
| Conread position: | 16-261 |
| Cow position: | chr13:18350711-18350961 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 228 |
| Conread position: | 17-122 |
| Cow position: | chr13:11413461-11413353 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 19-262 |
| Cow position: | chr13:6945255-6945493 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 176, 70 |
| Conread position: | 21-237 |
| Cow position: | chr13:48545449-48545246 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 23-262 |
| Cow position: | chr13:6153902-6153657 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 25-206 |
| Cow position: | chr13:6893922-6894105 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 161, 108 |
| Conread position: | 25-262 |
| Cow position: | chr13:21563617-21563867 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 26-262 |
| Cow position: | chr13:11955231-11954985 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 27-261 |
| Cow position: | chr13:23585993-23586245 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 27-262 |
| Cow position: | chr13:9265942-9265707 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 28-262 |
| Cow position: | chr13:60973965-60974208 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 30-263 |
| Cow position: | chr13:53282782-53283016 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 32-238 |
| Cow position: | chr13:49760493-49760710 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 134 |
| Conread position: | 34-262 |
| Cow position: | chr13:8201591-8201361 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 37-262 |
| Cow position: | chr13:46458519-46458747 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 39-262 |
| Cow position: | chr13:47863803-47863576 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 40-261 |
| Cow position: | chr13:29630756-29630979 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 62, 152 |
| Conread position: | 40-262 |
| Cow position: | chr13:4208914-4208693 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 155, 90 |
| Conread position: | 40-263 |
| Cow position: | chr13:60487556-60487334 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 42-262 |
| Cow position: | chr13:1043068-1042836 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 42-262 |
| Cow position: | chr13:46637221-46637006 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 42-262 |
| Cow position: | chr13:57326199-57325976 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 193 |
| Conread position: | 43-234 |
| Cow position: | chr13:54696011-54695819 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 87 |
| Conread position: | 47-257 |
| Cow position: | chr13:33631035-33631240 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 50-259 |
| Cow position: | chr13:34334031-34333815 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 63-262 |
| Cow position: | chr13:25531867-25531663 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 89-262 |
| Cow position: | chr13:34191489-34191317 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 96-263 |
| Cow position: | chr13:42070976-42071140 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 102-260 |
| Cow position: | chr13:24822799-24822643 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 111-262 |
| Cow position: | chr13:4423514-4423358 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 115-262 |
| Cow position: | chr13:14085169-14085303 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 115-262 |
| Cow position: | chr13:39699783-39699929 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 136-266 |
| Cow position: | chr13:7262389-7262521 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 137-260 |
| Cow position: | chr13:548505-548625 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 139-261 |
| Cow position: | chr13:2302841-2302716 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 149-266 |
| Cow position: | chr13:1766780-1766900 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 155-262 |
| Cow position: | chr13:6894108-6894220 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 159-263 |
| Cow position: | chr13:46985036-46985143 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.