Cow genome map

Conread name: Pig1-92K11

Conread position: 1-123
Cow position: chr23:19792102-19791980 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr23:38941748-38941605 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 39

Conread position: 1-146
Cow position: chr23:13320064-13319923 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1-146
Cow position: chr23:21847882-21847732 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-161
Cow position: chr23:6667578-6667430 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-165
Cow position: chr23:26861562-26861401 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 65

Conread position: 1-170
Cow position: chr23:1717422-1717597 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 1-177
Cow position: chr23:36082712-36082530 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 168

Conread position: 1-179
Cow position: chr23:35155501-35155321 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 65

Conread position: 1-193
Cow position: chr23:1677522-1677330 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 74

Conread position: 1-193
Cow position: chr23:7611388-7611202 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 1-193
Cow position: chr23:26217687-26217496 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 1-209
Cow position: chr23:35497900-35498106 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 31

Conread position: 1-210
Cow position: chr23:20585574-20585780 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 88, 142

Conread position: 1-215
Cow position: chr23:17000832-17000617 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 36

Conread position: 1-230
Cow position: chr23:18326931-18326701 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 107

Conread position: 1-232
Cow position: chr23:4956146-4955932 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 196, 93

Conread position: 1-232
Cow position: chr23:21275890-21276129 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 140

Conread position: 1-258
Cow position: chr23:37223946-37224198 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 89

Conread position: 1-259
Cow position: chr23:13359953-13359681 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 85

Conread position: 1-259
Cow position: chr23:30308035-30307776 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 136

Conread position: 1-259
Cow position: chr23:35362651-35362908 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 176

Conread position: 1-260
Cow position: chr23:14126691-14126436 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 78

Conread position: 1-261
Cow position: chr23:15872565-15872834 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 36

Conread position: 1-261
Cow position: chr23:16072217-16072457 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 1-261
Cow position: chr23:16237129-16237390 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 76

Conread position: 1-261
Cow position: chr23:26067220-26066976 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 64

Conread position: 1-262
Cow position: chr23:16058709-16058464 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 27

Conread position: 1-262
Cow position: chr23:16793709-16793460 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 207, 146

Conread position: 1-262
Cow position: chr23:19636136-19636398 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 1-262
Cow position: chr23:22660462-22660717 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 1-262
Cow position: chr23:26051166-26050898 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 34

Conread position: 1-262
Cow position: chr23:28701114-28700866 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 244, 94

Conread position: 1-262
Cow position: chr23:30210221-30210482 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 194, 118

Conread position: 1-262
Cow position: chr23:40862474-40862205 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 146

Conread position: 1-266
Cow position: chr23:5389826-5389563 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 63

Conread position: 1-266
Cow position: chr23:20171708-20171433 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 1-268
Cow position: chr23:21866868-21866601 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 67

Conread position: 2-142
Cow position: chr23:8930011-8930154 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 135

Conread position: 2-194
Cow position: chr23:14840386-14840581 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 87, 127

Conread position: 2-212
Cow position: chr23:23192030-23192238 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 193, 15

Conread position: 2-260
Cow position: chr23:17092371-17092620 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 91, 137

Conread position: 2-262
Cow position: chr23:11434134-11434398 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 215

Conread position: 2-266
Cow position: chr23:30773573-30773820 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 193, 44

Conread position: 3-262
Cow position: chr23:35177446-35177182 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 28, 219

Conread position: 4-98
Cow position: chr23:10066346-10066440 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-248
Cow position: chr23:28894831-28895081 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 5-239
Cow position: chr23:8538012-8538230 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 87

Conread position: 5-262
Cow position: chr23:9711472-9711722 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 190, 135

Conread position: 6-261
Cow position: chr23:29393554-29393313 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 141

Conread position: 6-261
Cow position: chr23:40525861-40526106 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 140

Conread position: 7-203
Cow position: chr23:17477141-17477324 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 177, 18

Conread position: 7-257
Cow position: chr23:11404150-11404390 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 18

Conread position: 8-263
Cow position: chr23:1203607-1203858 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 189, 81

Conread position: 10-260
Cow position: chr23:38058237-38058482 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 50

Conread position: 12-261
Cow position: chr23:40651356-40651599 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 123

Conread position: 12-261
Cow position: chr23:40891479-40891224 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 210

Conread position: 13-260
Cow position: chr23:38455062-38455318 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 13-262
Cow position: chr23:4528763-4529021 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 22

Conread position: 13-262
Cow position: chr23:22588164-22588404 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 179, 76

Conread position: 15-150
Cow position: chr23:18495909-18495774 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 126, 25

Conread position: 17-262
Cow position: chr23:20753118-20752875 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 25-144
Cow position: chr23:29981308-29981191 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 0

Conread position: 26-260
Cow position: chr23:21660048-21659807 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 94

Conread position: 26-266
Cow position: chr23:41589820-41590052 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 61

Conread position: 30-259
Cow position: chr23:10414925-10415161 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 192

Conread position: 30-262
Cow position: chr23:31607056-31607295 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 117

Conread position: 33-193
Cow position: chr23:22419078-22418930 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 33-194
Cow position: chr23:14543129-14543290 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 35-153
Cow position: chr23:23975003-23974892 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 40-251
Cow position: chr23:27290693-27290900 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 6

Conread position: 48-262
Cow position: chr23:18492247-18492033 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 90

Conread position: 49-255
Cow position: chr23:36146390-36146587 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 40

Conread position: 53-262
Cow position: chr23:6031951-6031743 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 165

Conread position: 56-265
Cow position: chr23:7550581-7550788 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 117

Conread position: 73-238
Cow position: chr23:24515834-24515993 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 84-260
Cow position: chr23:28544293-28544458 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 67

Conread position: 92-262
Cow position: chr23:32662612-32662441 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 54

Conread position: 92-263
Cow position: chr23:645360-645190 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 60

Conread position: 95-261
Cow position: chr23:7220984-7221147 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 142, 22

Conread position: 96-266
Cow position: chr23:20781850-20781684 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 107

Conread position: 105-260
Cow position: chr23:2956199-2956045 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 137, 40

Conread position: 110-262
Cow position: chr23:27523024-27523175 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 68

Conread position: 117-262
Cow position: chr23:496367-496515 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 118-248
Cow position: chr23:35373946-35374085 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 135-262
Cow position: chr23:23470927-23470803 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 112
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 58

Conread position: 155-262
Cow position: chr23:3745580-3745470 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.