Cow genome map

Conread name: Pig1-92K11

Conread position: 1-115
Cow position: chr24:10837988-10837877 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 1-120
Cow position: chr24:36497636-36497754 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 1-151
Cow position: chr24:6427806-6427651 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 1-170
Cow position: chr24:1271789-1271954 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 151, 71

Conread position: 1-170
Cow position: chr24:10546170-10546000 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 151, 0

Conread position: 1-178
Cow position: chr24:28335462-28335637 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 92, 139

Conread position: 1-181
Cow position: chr24:42681828-42681655 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-189
Cow position: chr24:25165135-25164944 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 142

Conread position: 1-191
Cow position: chr24:19754672-19754483 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-215
Cow position: chr24:11456741-11456958 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 16

Conread position: 1-239
Cow position: chr24:1438169-1438414 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 7

Conread position: 1-249
Cow position: chr24:31776830-31776592 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 1-251
Cow position: chr24:35569276-35569031 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 36

Conread position: 1-253
Cow position: chr24:40809265-40809514 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 24

Conread position: 1-259
Cow position: chr24:34368907-34369165 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 16

Conread position: 1-260
Cow position: chr24:11201547-11201809 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 125

Conread position: 1-260
Cow position: chr24:26455942-26455677 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 139

Conread position: 1-260
Cow position: chr24:32158175-32158434 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 232

Conread position: 1-260
Cow position: chr24:39681952-39681693 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 134

Conread position: 1-261
Cow position: chr24:14617760-14617491 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 21

Conread position: 1-261
Cow position: chr24:17981285-17981034 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 189, 63

Conread position: 1-261
Cow position: chr24:27054512-27054244 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 210

Conread position: 1-261
Cow position: chr24:35827837-35827578 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 1-261
Cow position: chr24:39123943-39123701 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 236, 98

Conread position: 1-261
Cow position: chr24:40091481-40091737 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 24

Conread position: 1-262
Cow position: chr24:5849276-5849562 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 102, 240

Conread position: 1-262
Cow position: chr24:6061282-6061563 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 137

Conread position: 1-262
Cow position: chr24:19612107-19611845 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 70

Conread position: 1-262
Cow position: chr24:24311601-24311340 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 16

Conread position: 1-262
Cow position: chr24:27633499-27633249 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 241, 48

Conread position: 1-262
Cow position: chr24:30860736-30860472 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 46

Conread position: 1-262
Cow position: chr24:31258238-31258502 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 146

Conread position: 1-262
Cow position: chr24:31378850-31378596 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 16

Conread position: 1-262
Cow position: chr24:36801476-36801221 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 1-265
Cow position: chr24:2143849-2143579 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 92, 49

Conread position: 1-268
Cow position: chr24:14337828-14337565 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 93, 16

Conread position: 1-270
Cow position: chr24:32758662-32758931 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 27

Conread position: 2-102
Cow position: chr24:41332484-41332584 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-237
Cow position: chr24:41963000-41963233 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 193

Conread position: 2-259
Cow position: chr24:25678123-25677876 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 79

Conread position: 2-261
Cow position: chr24:7079884-7079627 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 129

Conread position: 2-266
Cow position: chr24:23824322-23824584 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 60, 107

Conread position: 3-182
Cow position: chr24:22888689-22888507 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 14

Conread position: 3-245
Cow position: chr24:42943021-42943256 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 34

Conread position: 3-262
Cow position: chr24:6507672-6507928 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-193
Cow position: chr24:27900824-27900635 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 51

Conread position: 5-229
Cow position: chr24:12263617-12263843 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 60

Conread position: 5-260
Cow position: chr24:28279721-28279480 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 232, 94

Conread position: 6-262
Cow position: chr24:18786828-18787084 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 34

Conread position: 7-116
Cow position: chr24:44187635-44187522 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-244
Cow position: chr24:27418008-27418248 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 22

Conread position: 9-256
Cow position: chr24:29042113-29041879 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 227, 57

Conread position: 9-261
Cow position: chr24:32085838-32086082 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 90, 67

Conread position: 12-259
Cow position: chr24:28349665-28349422 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 125

Conread position: 13-215
Cow position: chr24:15617386-15617591 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 170, 82

Conread position: 13-307
Cow position: chr24:35576451-35576743 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 22

Conread position: 19-262
Cow position: chr24:29679230-29679471 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 16

Conread position: 22-260
Cow position: chr24:2970529-2970768 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 42

Conread position: 22-262
Cow position: chr24:19769570-19769329 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 132

Conread position: 25-193
Cow position: chr24:24495764-24495932 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 25-196
Cow position: chr24:18567442-18567613 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 126, 101

Conread position: 25-261
Cow position: chr24:27683380-27683600 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 74, 108

Conread position: 26-240
Cow position: chr24:36713831-36713610 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 32

Conread position: 26-262
Cow position: chr24:39350140-39350377 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 92

Conread position: 26-268
Cow position: chr24:18243391-18243640 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 115

Conread position: 30-237
Cow position: chr24:32894463-32894261 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 165, 65

Conread position: 30-262
Cow position: chr24:35529979-35529759 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 165, 111

Conread position: 31-263
Cow position: chr24:15508473-15508703 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 87

Conread position: 40-253
Cow position: chr24:17104508-17104727 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 117

Conread position: 42-215
Cow position: chr24:18393464-18393642 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 120

Conread position: 58-260
Cow position: chr24:23685023-23685223 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 141

Conread position: 58-261
Cow position: chr24:6342215-6342011 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 24

Conread position: 69-261
Cow position: chr24:14103618-14103425 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 125, 90

Conread position: 75-263
Cow position: chr24:20861938-20862123 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 71

Conread position: 79-259
Cow position: chr24:13297692-13297875 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 120

Conread position: 85-262
Cow position: chr24:7401204-7401380 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 129

Conread position: 89-253
Cow position: chr24:42418980-42419146 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 41

Conread position: 92-262
Cow position: chr24:39955045-39955206 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 146, 55

Conread position: 92-265
Cow position: chr24:42580834-42580997 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 68

Conread position: 95-268
Cow position: chr24:41332872-41333048 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 64

Conread position: 101-258
Cow position: chr24:39259157-39259005 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 106-260
Cow position: chr24:10837741-10837584 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 122-262
Cow position: chr24:40855170-40855027 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 123-261
Cow position: chr24:37204901-37205042 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 125-269
Cow position: chr24:43733946-43733798 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 155-261
Cow position: chr24:29691345-29691458 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.