Cow genome map
Conread name: | Pig1-92K11 |
Conread position: | 1-138 |
Cow position: | chr29:18068027-18067889 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 114 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 109, 24 |
Conread position: | 1-160 |
Cow position: | chr29:11766839-11766683 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 128 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-193 |
Cow position: | chr29:21186751-21186944 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 68, 21 |
Conread position: | 1-193 |
Cow position: | chr29:21675516-21675324 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 93, 45 |
Conread position: | 1-216 |
Cow position: | chr29:25426536-25426752 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 157 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 98, 43 |
Conread position: | 1-233 |
Cow position: | chr29:7054535-7054308 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 1-244 |
Cow position: | chr29:18963857-18963611 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 183 |
Conread position: | 1-244 |
Cow position: | chr29:32655312-32655555 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 60, 76 |
Conread position: | 1-245 |
Cow position: | chr29:14758740-14758987 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 1-248 |
Cow position: | chr29:26985350-26985101 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 67, 151 |
Conread position: | 1-254 |
Cow position: | chr29:9512383-9512135 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 60, 130 |
Conread position: | 1-259 |
Cow position: | chr29:2274717-2274966 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 171 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 231, 94 |
Conread position: | 1-259 |
Cow position: | chr29:18073062-18072795 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 122 |
Conread position: | 1-260 |
Cow position: | chr29:6772252-6771993 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 16 |
Conread position: | 1-260 |
Cow position: | chr29:13554260-13553995 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-261 |
Cow position: | chr29:16055009-16055275 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 146 |
Conread position: | 1-261 |
Cow position: | chr29:25923839-25924108 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 193 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 1-261 |
Cow position: | chr29:26299092-26298845 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 189 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 63, 49 |
Conread position: | 1-261 |
Cow position: | chr29:29559597-29559860 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 192 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 63, 49 |
Conread position: | 1-262 |
Cow position: | chr29:356444-356184 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 61, 155 |
Conread position: | 1-262 |
Cow position: | chr29:7407782-7408026 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 236, 16 |
Conread position: | 1-262 |
Cow position: | chr29:11071562-11071841 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 1-262 |
Cow position: | chr29:18695373-18695116 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 200 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 97, 16 |
Conread position: | 1-262 |
Cow position: | chr29:19509069-19508814 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 197 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 194, 92 |
Conread position: | 1-262 |
Cow position: | chr29:26317975-26317713 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 62, 45 |
Conread position: | 1-262 |
Cow position: | chr29:29302535-29302793 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 147 |
Conread position: | 1-262 |
Cow position: | chr29:34736365-34736610 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 194, 27 |
Conread position: | 1-262 |
Cow position: | chr29:37960853-37961119 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 79 |
Conread position: | 1-262 |
Cow position: | chr29:41083271-41083018 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 92, 146 |
Conread position: | 2-147 |
Cow position: | chr29:19734783-19734643 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 2-191 |
Cow position: | chr29:5976667-5976854 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 143 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 2-206 |
Cow position: | chr29:21265882-21265677 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 67, 15 |
Conread position: | 2-218 |
Cow position: | chr29:9937960-9938183 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 18, 39 |
Conread position: | 2-224 |
Cow position: | chr29:1340904-1340679 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 178 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 93, 50 |
Conread position: | 2-255 |
Cow position: | chr29:18021561-18021812 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 172 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 41, 33 |
Conread position: | 2-259 |
Cow position: | chr29:22895849-22895588 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 67, 197 |
Conread position: | 2-261 |
Cow position: | chr29:650396-650138 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 38 |
Conread position: | 2-261 |
Cow position: | chr29:4367848-4367580 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 2-262 |
Cow position: | chr29:709011-709262 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 67, 93 |
Conread position: | 2-262 |
Cow position: | chr29:26129616-26129360 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 131 |
Conread position: | 2-263 |
Cow position: | chr29:11366356-11366098 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 60, 33 |
Conread position: | 3-185 |
Cow position: | chr29:4691267-4691455 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 144 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 3-240 |
Cow position: | chr29:4444839-4444597 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 59, 208 |
Conread position: | 3-257 |
Cow position: | chr29:18541167-18540926 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 190 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 148, 61 |
Conread position: | 3-259 |
Cow position: | chr29:39023217-39023483 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 61, 196 |
Conread position: | 3-260 |
Cow position: | chr29:7663149-7663409 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 94, 65 |
Conread position: | 4-120 |
Cow position: | chr29:24323770-24323655 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 4-248 |
Cow position: | chr29:942745-942500 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 91, 76 |
Conread position: | 4-262 |
Cow position: | chr29:13127000-13127263 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 58, 151 |
Conread position: | 7-262 |
Cow position: | chr29:17543560-17543309 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 7-262 |
Cow position: | chr29:21925309-21925068 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 191 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 187, 33 |
Conread position: | 7-262 |
Cow position: | chr29:34609620-34609861 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 193 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 234, 10 |
Conread position: | 9-239 |
Cow position: | chr29:13634183-13634421 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 169 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 86, 143 |
Conread position: | 10-262 |
Cow position: | chr29:4085424-4085178 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 5, 26 |
Conread position: | 11-181 |
Cow position: | chr29:5616755-5616928 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 57, 141 |
Conread position: | 11-193 |
Cow position: | chr29:38758912-38759090 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 12-240 |
Cow position: | chr29:10188171-10187936 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 78, 99 |
Conread position: | 12-262 |
Cow position: | chr29:32799600-32799853 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 29, 16 |
Conread position: | 13-261 |
Cow position: | chr29:11005846-11005588 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 56, 213 |
Conread position: | 13-261 |
Cow position: | chr29:12451485-12451234 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 53 |
Conread position: | 14-268 |
Cow position: | chr29:19897719-19897458 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 191 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 33, 28 |
Conread position: | 22-262 |
Cow position: | chr29:11787897-11787655 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 188 |
Conread position: | 22-262 |
Cow position: | chr29:24604034-24604288 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 40, 130 |
Conread position: | 25-172 |
Cow position: | chr29:34785114-34785261 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-262 |
Cow position: | chr29:4520434-4520194 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 15, 193 |
Conread position: | 28-248 |
Cow position: | chr29:11634918-11634695 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 36, 9 |
Conread position: | 28-255 |
Cow position: | chr29:13028537-13028293 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 28-262 |
Cow position: | chr29:24952782-24952547 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 173 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 13, 30 |
Conread position: | 29-266 |
Cow position: | chr29:27285866-27285651 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 37-232 |
Cow position: | chr29:32645547-32645361 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 39-262 |
Cow position: | chr29:22778091-22778319 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 160 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 23, 115 |
Conread position: | 40-221 |
Cow position: | chr29:35000091-35000274 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 13 |
Conread position: | 40-244 |
Cow position: | chr29:41530934-41530720 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 126 |
Conread position: | 40-261 |
Cow position: | chr29:12901034-12901249 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 155, 26 |
Conread position: | 42-234 |
Cow position: | chr29:23233529-23233336 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 155 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 153, 50 |
Conread position: | 79-261 |
Cow position: | chr29:21534628-21534816 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 20, 175 |
Conread position: | 95-262 |
Cow position: | chr29:17301558-17301388 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 57, 145 |
Conread position: | 111-245 |
Cow position: | chr29:24323431-24323296 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 80, 19 |
Conread position: | 118-261 |
Cow position: | chr29:603316-603455 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 145-262 |
Cow position: | chr29:5964442-5964562 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 147-262 |
Cow position: | chr29:7393076-7392958 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 101 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.