Cow genome map

Conread name: Pig1-92K11

Conread position: 1-138
Cow position: chr29:18068027-18067889 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 24

Conread position: 1-160
Cow position: chr29:11766839-11766683 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 1-193
Cow position: chr29:21186751-21186944 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 21

Conread position: 1-193
Cow position: chr29:21675516-21675324 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 45

Conread position: 1-216
Cow position: chr29:25426536-25426752 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 43

Conread position: 1-233
Cow position: chr29:7054535-7054308 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-244
Cow position: chr29:18963857-18963611 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 183

Conread position: 1-244
Cow position: chr29:32655312-32655555 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 76

Conread position: 1-245
Cow position: chr29:14758740-14758987 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 1-248
Cow position: chr29:26985350-26985101 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 151

Conread position: 1-254
Cow position: chr29:9512383-9512135 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 130

Conread position: 1-259
Cow position: chr29:2274717-2274966 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 231, 94

Conread position: 1-259
Cow position: chr29:18073062-18072795 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 122

Conread position: 1-260
Cow position: chr29:6772252-6771993 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 16

Conread position: 1-260
Cow position: chr29:13554260-13553995 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-261
Cow position: chr29:16055009-16055275 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 146

Conread position: 1-261
Cow position: chr29:25923839-25924108 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 39

Conread position: 1-261
Cow position: chr29:26299092-26298845 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 49

Conread position: 1-261
Cow position: chr29:29559597-29559860 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 49

Conread position: 1-262
Cow position: chr29:356444-356184 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 155

Conread position: 1-262
Cow position: chr29:7407782-7408026 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 236, 16

Conread position: 1-262
Cow position: chr29:11071562-11071841 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 0

Conread position: 1-262
Cow position: chr29:18695373-18695116 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 97, 16

Conread position: 1-262
Cow position: chr29:19509069-19508814 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 194, 92

Conread position: 1-262
Cow position: chr29:26317975-26317713 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 62, 45

Conread position: 1-262
Cow position: chr29:29302535-29302793 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 1-262
Cow position: chr29:34736365-34736610 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 194, 27

Conread position: 1-262
Cow position: chr29:37960853-37961119 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 1-262
Cow position: chr29:41083271-41083018 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 92, 146

Conread position: 2-147
Cow position: chr29:19734783-19734643 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 2-191
Cow position: chr29:5976667-5976854 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 2-206
Cow position: chr29:21265882-21265677 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 15

Conread position: 2-218
Cow position: chr29:9937960-9938183 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 39

Conread position: 2-224
Cow position: chr29:1340904-1340679 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 50

Conread position: 2-255
Cow position: chr29:18021561-18021812 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 33

Conread position: 2-259
Cow position: chr29:22895849-22895588 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 197

Conread position: 2-261
Cow position: chr29:650396-650138 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 38

Conread position: 2-261
Cow position: chr29:4367848-4367580 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-262
Cow position: chr29:709011-709262 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 67, 93

Conread position: 2-262
Cow position: chr29:26129616-26129360 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 131

Conread position: 2-263
Cow position: chr29:11366356-11366098 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 33

Conread position: 3-185
Cow position: chr29:4691267-4691455 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 28

Conread position: 3-240
Cow position: chr29:4444839-4444597 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 208

Conread position: 3-257
Cow position: chr29:18541167-18540926 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 148, 61

Conread position: 3-259
Cow position: chr29:39023217-39023483 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 196

Conread position: 3-260
Cow position: chr29:7663149-7663409 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 94, 65

Conread position: 4-120
Cow position: chr29:24323770-24323655 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 4-248
Cow position: chr29:942745-942500 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 76

Conread position: 4-262
Cow position: chr29:13127000-13127263 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 151

Conread position: 7-262
Cow position: chr29:17543560-17543309 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 88

Conread position: 7-262
Cow position: chr29:21925309-21925068 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 33

Conread position: 7-262
Cow position: chr29:34609620-34609861 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 234, 10

Conread position: 9-239
Cow position: chr29:13634183-13634421 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 143

Conread position: 10-262
Cow position: chr29:4085424-4085178 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 26

Conread position: 11-181
Cow position: chr29:5616755-5616928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 141

Conread position: 11-193
Cow position: chr29:38758912-38759090 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 12-240
Cow position: chr29:10188171-10187936 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 99

Conread position: 12-262
Cow position: chr29:32799600-32799853 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 16

Conread position: 13-261
Cow position: chr29:11005846-11005588 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 213

Conread position: 13-261
Cow position: chr29:12451485-12451234 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 53

Conread position: 14-268
Cow position: chr29:19897719-19897458 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 28

Conread position: 22-262
Cow position: chr29:11787897-11787655 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 188

Conread position: 22-262
Cow position: chr29:24604034-24604288 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 130

Conread position: 25-172
Cow position: chr29:34785114-34785261 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 27-262
Cow position: chr29:4520434-4520194 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 193

Conread position: 28-248
Cow position: chr29:11634918-11634695 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 9

Conread position: 28-255
Cow position: chr29:13028537-13028293 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 28-262
Cow position: chr29:24952782-24952547 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 30

Conread position: 29-266
Cow position: chr29:27285866-27285651 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 37-232
Cow position: chr29:32645547-32645361 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 39-262
Cow position: chr29:22778091-22778319 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 115

Conread position: 40-221
Cow position: chr29:35000091-35000274 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 13

Conread position: 40-244
Cow position: chr29:41530934-41530720 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 126

Conread position: 40-261
Cow position: chr29:12901034-12901249 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 155, 26

Conread position: 42-234
Cow position: chr29:23233529-23233336 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 50

Conread position: 79-261
Cow position: chr29:21534628-21534816 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 175

Conread position: 95-262
Cow position: chr29:17301558-17301388 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 145

Conread position: 111-245
Cow position: chr29:24323431-24323296 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 19

Conread position: 118-261
Cow position: chr29:603316-603455 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 145-262
Cow position: chr29:5964442-5964562 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 147-262
Cow position: chr29:7393076-7392958 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.