Cow genome map
| Conread name: | Pig1-92K11 |
| Conread position: | 1-104 |
| Cow position: | chr5:17097861-17097759 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-119 |
| Cow position: | chr5:21356739-21356857 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 1-122 |
| Cow position: | chr5:2819409-2819287 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-122 |
| Cow position: | chr5:3059070-3058949 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-122 |
| Cow position: | chr5:38936443-38936560 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-125 |
| Cow position: | chr5:3225829-3225949 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-127 |
| Cow position: | chr5:23640866-23640991 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-127 |
| Cow position: | chr5:36027996-36028124 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 1-141 |
| Cow position: | chr5:75687175-75687323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 1-145 |
| Cow position: | chr5:54533135-54532992 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-146 |
| Cow position: | chr5:21530954-21531103 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 1-149 |
| Cow position: | chr5:1349641-1349794 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 1-150 |
| Cow position: | chr5:63328743-63328894 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 1-165 |
| Cow position: | chr5:58344009-58343841 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-170 |
| Cow position: | chr5:25681210-25681371 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-183 |
| Cow position: | chr5:21194972-21195147 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:34914401-34914590 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 1-185 |
| Cow position: | chr5:49655877-49656057 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-189 |
| Cow position: | chr5:15483183-15482995 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 152 |
| Conread position: | 1-189 |
| Cow position: | chr5:48178231-48178426 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 146 |
| Conread position: | 1-191 |
| Cow position: | chr5:67149867-67150052 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 119, 147 |
| Conread position: | 1-192 |
| Cow position: | chr5:47836700-47836504 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 1-193 |
| Cow position: | chr5:66190135-66189944 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 1-201 |
| Cow position: | chr5:36487544-36487750 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 134 |
| Conread position: | 1-218 |
| Cow position: | chr5:18695311-18695108 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 1-230 |
| Cow position: | chr5:49946058-49945830 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 1-235 |
| Cow position: | chr5:57381696-57381454 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 1-238 |
| Cow position: | chr5:46798393-46798155 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 1-242 |
| Cow position: | chr5:17267741-17267988 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:41598561-41598810 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 178 |
| Conread position: | 1-255 |
| Cow position: | chr5:13044261-13044501 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 194, 16 |
| Conread position: | 1-255 |
| Cow position: | chr5:18554043-18553793 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 1-258 |
| Cow position: | chr5:51503154-51502902 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 145 |
| Conread position: | 1-259 |
| Cow position: | chr5:26594948-26595214 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 234 |
| Conread position: | 1-259 |
| Cow position: | chr5:73526517-73526269 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 126 |
| Conread position: | 1-260 |
| Cow position: | chr5:14154298-14154035 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 138 |
| Conread position: | 1-260 |
| Cow position: | chr5:23366614-23366878 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 1-260 |
| Cow position: | chr5:34184374-34184111 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 96, 140 |
| Conread position: | 1-260 |
| Cow position: | chr5:39442447-39442185 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 1-261 |
| Cow position: | chr5:4927416-4927680 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 1-261 |
| Cow position: | chr5:39695802-39695540 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 92, 178 |
| Conread position: | 1-261 |
| Cow position: | chr5:48758091-48757833 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 199 |
| Conread position: | 1-262 |
| Cow position: | chr5:1343706-1343969 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 1-262 |
| Cow position: | chr5:3649311-3649572 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 162 |
| Conread position: | 1-262 |
| Cow position: | chr5:22839329-22839586 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 22 |
| Conread position: | 1-262 |
| Cow position: | chr5:27615663-27615400 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 1-262 |
| Cow position: | chr5:30333101-30332826 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-262 |
| Cow position: | chr5:39875275-39875009 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 1-262 |
| Cow position: | chr5:40711296-40711555 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 192, 27 |
| Conread position: | 1-262 |
| Cow position: | chr5:41637015-41636756 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 1-262 |
| Cow position: | chr5:50425337-50425591 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 1-262 |
| Cow position: | chr5:56385364-56385115 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 1-262 |
| Cow position: | chr5:64399159-64398896 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 146 |
| Conread position: | 1-262 |
| Cow position: | chr5:73556046-73556300 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 1-263 |
| Cow position: | chr5:49474392-49474660 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 165 |
| Conread position: | 1-266 |
| Cow position: | chr5:23529132-23529394 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 1-266 |
| Cow position: | chr5:40234262-40234013 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 162, 32 |
| Conread position: | 1-266 |
| Cow position: | chr5:69773694-69773450 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 236, 10 |
| Conread position: | 1-269 |
| Cow position: | chr5:27411250-27411516 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 62, 143 |
| Conread position: | 2-153 |
| Cow position: | chr5:41907179-41907036 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 2-191 |
| Cow position: | chr5:45396263-45396452 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 2-192 |
| Cow position: | chr5:34279457-34279643 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 2-240 |
| Cow position: | chr5:59449423-59449665 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 98, 10 |
| Conread position: | 2-241 |
| Cow position: | chr5:28945910-28946155 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 2-245 |
| Cow position: | chr5:41604773-41604528 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 130 |
| Conread position: | 2-258 |
| Cow position: | chr5:3442595-3442346 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 184, 44 |
| Conread position: | 2-258 |
| Cow position: | chr5:48535938-48535701 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 2-259 |
| Cow position: | chr5:49567573-49567317 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 15 |
| Conread position: | 2-260 |
| Cow position: | chr5:17028245-17027985 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 150 |
| Conread position: | 2-261 |
| Cow position: | chr5:1949908-1950175 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 2-261 |
| Cow position: | chr5:25919486-25919736 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 2-261 |
| Cow position: | chr5:47680868-47681115 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 97, 134 |
| Conread position: | 2-261 |
| Cow position: | chr5:48143639-48143900 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 115 |
| Conread position: | 2-262 |
| Cow position: | chr5:30978503-30978249 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 2-262 |
| Cow position: | chr5:46610948-46611210 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 185 |
| Conread position: | 2-262 |
| Cow position: | chr5:62639054-62638793 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 2-263 |
| Cow position: | chr5:27102644-27102909 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 3-248 |
| Cow position: | chr5:3753000-3752761 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 89 |
| Conread position: | 3-260 |
| Cow position: | chr5:38629435-38629177 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 187 |
| Conread position: | 3-261 |
| Cow position: | chr5:18276626-18276365 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 3-261 |
| Cow position: | chr5:27008042-27007786 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 3-262 |
| Cow position: | chr5:29844429-29844165 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 59, 156 |
| Conread position: | 3-266 |
| Cow position: | chr5:40387733-40387992 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 4-260 |
| Cow position: | chr5:6890875-6891130 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 4-262 |
| Cow position: | chr5:58748917-58748652 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 160 |
| Conread position: | 5-240 |
| Cow position: | chr5:1687968-1688205 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 5-261 |
| Cow position: | chr5:31561681-31561419 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 5-266 |
| Cow position: | chr5:48573631-48573881 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 6-261 |
| Cow position: | chr5:33265320-33265567 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 6-262 |
| Cow position: | chr5:61487966-61488223 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 7-229 |
| Cow position: | chr5:17869830-17869609 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 188, 32 |
| Conread position: | 7-263 |
| Cow position: | chr5:26376689-26376447 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 8-152 |
| Cow position: | chr5:36024434-36024577 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 8-178 |
| Cow position: | chr5:28494237-28494401 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 8-261 |
| Cow position: | chr5:18104004-18104259 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 8-262 |
| Cow position: | chr5:503779-504024 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 8-262 |
| Cow position: | chr5:19905139-19905387 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 178, 147 |
| Conread position: | 8-262 |
| Cow position: | chr5:32282477-32282220 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 121, 136 |
| Conread position: | 9-248 |
| Cow position: | chr5:63188184-63188425 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 9-256 |
| Cow position: | chr5:43110692-43110458 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 10-216 |
| Cow position: | chr5:65043932-65044133 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 185, 114 |
| Conread position: | 10-259 |
| Cow position: | chr5:59303139-59303383 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 183 |
| Conread position: | 10-261 |
| Cow position: | chr5:13906995-13906755 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 186, 79 |
| Conread position: | 10-262 |
| Cow position: | chr5:36407293-36407044 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 185, 79 |
| Conread position: | 11-191 |
| Cow position: | chr5:56153756-56153573 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 11-210 |
| Cow position: | chr5:41945990-41945786 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 11-259 |
| Cow position: | chr5:25899733-25899982 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 127 |
| Conread position: | 11-262 |
| Cow position: | chr5:7552272-7552533 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 12-260 |
| Cow position: | chr5:16214827-16214575 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 12-265 |
| Cow position: | chr5:54090175-54089926 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 13-250 |
| Cow position: | chr5:6895988-6896229 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-259 |
| Cow position: | chr5:37069022-37068784 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 13-260 |
| Cow position: | chr5:26046461-26046222 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 13-262 |
| Cow position: | chr5:37808524-37808790 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 14-262 |
| Cow position: | chr5:68081835-68082081 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 19-262 |
| Cow position: | chr5:62142809-62142556 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 24-191 |
| Cow position: | chr5:2267375-2267217 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 25-255 |
| Cow position: | chr5:21534984-21535221 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 234 |
| Conread position: | 25-262 |
| Cow position: | chr5:22934329-22934567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 51 |
| Conread position: | 25-262 |
| Cow position: | chr5:55989867-55989629 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 170, 137 |
| Conread position: | 26-255 |
| Cow position: | chr5:38805219-38805446 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 28-262 |
| Cow position: | chr5:26262554-26262786 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 28-262 |
| Cow position: | chr5:52000343-52000108 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 28-262 |
| Cow position: | chr5:63987321-63987565 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 170 |
| Conread position: | 30-262 |
| Cow position: | chr5:35209355-35209589 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 34-260 |
| Cow position: | chr5:32696704-32696932 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 37-263 |
| Cow position: | chr5:34168078-34167844 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 40-262 |
| Cow position: | chr5:55929056-55928828 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 42-261 |
| Cow position: | chr5:36486603-36486378 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 42-262 |
| Cow position: | chr5:23753109-23753331 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 47-262 |
| Cow position: | chr5:70581793-70582012 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 47-268 |
| Cow position: | chr5:48405072-48405297 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 58-189 |
| Cow position: | chr5:60647048-60646918 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 58-262 |
| Cow position: | chr5:72173120-72172913 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 73-261 |
| Cow position: | chr5:17630802-17630979 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 74-262 |
| Cow position: | chr5:39181839-39182025 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 121, 72 |
| Conread position: | 74-262 |
| Cow position: | chr5:49479398-49479221 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 92-261 |
| Cow position: | chr5:45940554-45940725 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 93-262 |
| Cow position: | chr5:65924636-65924810 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 97-263 |
| Cow position: | chr5:72225271-72225105 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 104-262 |
| Cow position: | chr5:37713851-37714012 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 137 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 112-261 |
| Cow position: | chr5:66831675-66831827 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 114-262 |
| Cow position: | chr5:41229741-41229597 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 115-266 |
| Cow position: | chr5:20974413-20974565 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 126-261 |
| Cow position: | chr5:29560427-29560298 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 140-262 |
| Cow position: | chr5:33467031-33467157 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 140-262 |
| Cow position: | chr5:39710852-39710730 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 144-262 |
| Cow position: | chr5:9430458-9430571 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 148-262 |
| Cow position: | chr5:59356993-59356876 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 163-262 |
| Cow position: | chr5:14538671-14538773 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.