Cow genome map
| Conread name: | Pig1-92K11 |
| Conread position: | 1-93 |
| Cow position: | chr6:60423178-60423268 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-108 |
| Cow position: | chr6:53264635-53264740 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-120 |
| Cow position: | chr6:28164989-28164866 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-128 |
| Cow position: | chr6:47192361-47192491 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 1-137 |
| Cow position: | chr6:41042083-41041952 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-144 |
| Cow position: | chr6:10237498-10237355 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-160 |
| Cow position: | chr6:1890413-1890575 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 1-162 |
| Cow position: | chr6:46676266-46676428 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 1-164 |
| Cow position: | chr6:28795503-28795337 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 1-167 |
| Cow position: | chr6:64427389-64427217 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-182 |
| Cow position: | chr6:30701606-30701425 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 1-187 |
| Cow position: | chr6:1009030-1008854 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-191 |
| Cow position: | chr6:43760520-43760341 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-193 |
| Cow position: | chr6:510140-510327 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 1-193 |
| Cow position: | chr6:32412475-32412659 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-193 |
| Cow position: | chr6:51294450-51294254 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 159 |
| Conread position: | 1-200 |
| Cow position: | chr6:32798708-32798909 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-212 |
| Cow position: | chr6:16733579-16733356 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 129, 68 |
| Conread position: | 1-212 |
| Cow position: | chr6:47858448-47858238 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 205, 31 |
| Conread position: | 1-214 |
| Cow position: | chr6:13718928-13718711 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 95, 155 |
| Conread position: | 1-218 |
| Cow position: | chr6:32277110-32276891 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 189 |
| Conread position: | 1-223 |
| Cow position: | chr6:9454448-9454229 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 1-232 |
| Cow position: | chr6:40487-40722 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 1-232 |
| Cow position: | chr6:4023266-4023026 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 1-232 |
| Cow position: | chr6:38453617-38453841 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-240 |
| Cow position: | chr6:6596735-6596503 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-240 |
| Cow position: | chr6:29412624-29412837 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 178, 122 |
| Conread position: | 1-248 |
| Cow position: | chr6:2324059-2324299 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 64, 68 |
| Conread position: | 1-248 |
| Cow position: | chr6:24650009-24649768 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 129, 93 |
| Conread position: | 1-248 |
| Cow position: | chr6:47026642-47026395 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 1-251 |
| Cow position: | chr6:3078665-3078427 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 194, 32 |
| Conread position: | 1-252 |
| Cow position: | chr6:41679245-41678997 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 32 |
| Conread position: | 1-252 |
| Cow position: | chr6:59588244-59588497 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 24 |
| Conread position: | 1-255 |
| Cow position: | chr6:2583024-2582781 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 98, 130 |
| Conread position: | 1-259 |
| Cow position: | chr6:15782350-15782620 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-259 |
| Cow position: | chr6:34549561-34549314 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 1-259 |
| Cow position: | chr6:55475420-55475149 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 1-260 |
| Cow position: | chr6:37054148-37053902 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 194, 7 |
| Conread position: | 1-260 |
| Cow position: | chr6:45064852-45065112 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 1-260 |
| Cow position: | chr6:54144467-54144207 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 137 |
| Conread position: | 1-261 |
| Cow position: | chr6:7173589-7173852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-261 |
| Cow position: | chr6:12652366-12652107 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-261 |
| Cow position: | chr6:20255242-20255487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 1-261 |
| Cow position: | chr6:24583067-24583329 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 182, 70 |
| Conread position: | 1-261 |
| Cow position: | chr6:31425393-31425656 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 114 |
| Conread position: | 1-261 |
| Cow position: | chr6:36194759-36194492 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 1-261 |
| Cow position: | chr6:65872053-65871802 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 1-262 |
| Cow position: | chr6:3545844-3545595 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 1-262 |
| Cow position: | chr6:8318002-8318264 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 65 |
| Conread position: | 1-262 |
| Cow position: | chr6:17534354-17534618 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-262 |
| Cow position: | chr6:19427615-19427353 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 115 |
| Conread position: | 1-262 |
| Cow position: | chr6:24622809-24623073 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 1-262 |
| Cow position: | chr6:30160482-30160223 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 16 |
| Conread position: | 1-262 |
| Cow position: | chr6:42618042-42617780 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 1-262 |
| Cow position: | chr6:44371776-44372044 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 79, 30 |
| Conread position: | 1-262 |
| Cow position: | chr6:48572715-48572979 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 1-262 |
| Cow position: | chr6:52002519-52002268 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 236, 21 |
| Conread position: | 1-262 |
| Cow position: | chr6:52556334-52556574 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-262 |
| Cow position: | chr6:56376185-56376452 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-263 |
| Cow position: | chr6:827543-827808 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 125 |
| Conread position: | 1-266 |
| Cow position: | chr6:30474486-30474220 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 1-266 |
| Cow position: | chr6:50034565-50034824 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 1-266 |
| Cow position: | chr6:53674027-53673756 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 1-268 |
| Cow position: | chr6:14658770-14658502 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 1-271 |
| Cow position: | chr6:35774818-35775093 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 1-278 |
| Cow position: | chr6:4164006-4164285 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 2-112 |
| Cow position: | chr6:15754006-15753896 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 2-150 |
| Cow position: | chr6:18469070-18469214 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-232 |
| Cow position: | chr6:38914604-38914370 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 2-240 |
| Cow position: | chr6:24558041-24557804 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 15 |
| Conread position: | 2-241 |
| Cow position: | chr6:33929383-33929627 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 2-248 |
| Cow position: | chr6:41265274-41265040 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-249 |
| Cow position: | chr6:39073878-39073639 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 2-260 |
| Cow position: | chr6:16626114-16625849 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 9, 223 |
| Conread position: | 2-261 |
| Cow position: | chr6:25784468-25784213 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 128, 65 |
| Conread position: | 2-261 |
| Cow position: | chr6:48806845-48807095 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 98 |
| Conread position: | 2-262 |
| Cow position: | chr6:24545777-24545514 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 234 |
| Conread position: | 2-266 |
| Cow position: | chr6:6994795-6995057 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 2-266 |
| Cow position: | chr6:58332052-58331786 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 147 |
| Conread position: | 3-151 |
| Cow position: | chr6:59496381-59496229 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 3-189 |
| Cow position: | chr6:51387912-51387725 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 149 |
| Conread position: | 3-253 |
| Cow position: | chr6:6367509-6367762 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 192, 100 |
| Conread position: | 3-261 |
| Cow position: | chr6:6943519-6943776 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 3-261 |
| Cow position: | chr6:37612268-37612027 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 120 |
| Conread position: | 4-146 |
| Cow position: | chr6:12421128-12421275 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 4-236 |
| Cow position: | chr6:15997057-15997290 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 8 |
| Conread position: | 4-262 |
| Cow position: | chr6:28477330-28477078 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 134 |
| Conread position: | 4-262 |
| Cow position: | chr6:36652583-36652319 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 5-189 |
| Cow position: | chr6:19466075-19465892 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 155 |
| Conread position: | 5-248 |
| Cow position: | chr6:15025732-15025975 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 141 |
| Conread position: | 6-262 |
| Cow position: | chr6:7824906-7824664 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 6-262 |
| Cow position: | chr6:9026679-9026417 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 141 |
| Conread position: | 8-237 |
| Cow position: | chr6:19424854-19424629 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 187, 81 |
| Conread position: | 8-259 |
| Cow position: | chr6:21736736-21736983 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 8-262 |
| Cow position: | chr6:37739331-37739086 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 8-262 |
| Cow position: | chr6:50317887-50318156 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 8-262 |
| Cow position: | chr6:64436174-64436427 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 183, 81 |
| Conread position: | 9-262 |
| Cow position: | chr6:18582659-18582910 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 30 |
| Conread position: | 10-220 |
| Cow position: | chr6:54062816-54062604 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 10-261 |
| Cow position: | chr6:2365957-2366209 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 111, 171 |
| Conread position: | 10-262 |
| Cow position: | chr6:16634071-16634318 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 185, 79 |
| Conread position: | 10-262 |
| Cow position: | chr6:32817135-32816898 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 187, 68 |
| Conread position: | 11-205 |
| Cow position: | chr6:55643306-55643494 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 77 |
| Conread position: | 11-218 |
| Cow position: | chr6:7836069-7835860 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 11-255 |
| Cow position: | chr6:44511391-44511152 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 95 |
| Conread position: | 11-259 |
| Cow position: | chr6:24223004-24223257 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 132 |
| Conread position: | 11-261 |
| Cow position: | chr6:42567009-42566762 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 12-128 |
| Cow position: | chr6:38894960-38895075 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 12-259 |
| Cow position: | chr6:51840432-51840173 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 87, 227 |
| Conread position: | 12-262 |
| Cow position: | chr6:4079245-4079483 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 226, 29 |
| Conread position: | 12-262 |
| Cow position: | chr6:20379325-20379568 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 183, 74 |
| Conread position: | 12-262 |
| Cow position: | chr6:50270958-50271194 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 178, 90 |
| Conread position: | 12-262 |
| Cow position: | chr6:52901392-52901134 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 12-265 |
| Cow position: | chr6:16675963-16675706 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 13-128 |
| Cow position: | chr6:16219913-16220027 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-259 |
| Cow position: | chr6:57118789-57119036 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 80, 136 |
| Conread position: | 13-260 |
| Cow position: | chr6:6731412-6731169 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 82 |
| Conread position: | 13-261 |
| Cow position: | chr6:37149342-37149088 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 13-262 |
| Cow position: | chr6:35181104-35181358 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 13-262 |
| Cow position: | chr6:38218819-38218572 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 13-262 |
| Cow position: | chr6:59069467-59069724 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 13-263 |
| Cow position: | chr6:55842011-55842260 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 182, 134 |
| Conread position: | 15-262 |
| Cow position: | chr6:59508507-59508259 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 16-262 |
| Cow position: | chr6:61217881-61218130 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 17-261 |
| Cow position: | chr6:65946933-65947183 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 170, 28 |
| Conread position: | 18-262 |
| Cow position: | chr6:56860697-56860449 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 55, 136 |
| Conread position: | 22-259 |
| Cow position: | chr6:45596390-45596635 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 23-177 |
| Cow position: | chr6:50760942-50760787 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 25-259 |
| Cow position: | chr6:38018402-38018170 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 28-262 |
| Cow position: | chr6:20196164-20196393 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 28-262 |
| Cow position: | chr6:24781421-24781659 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 28-262 |
| Cow position: | chr6:44078652-44078418 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 28-262 |
| Cow position: | chr6:47326935-47327166 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 121 |
| Conread position: | 29-210 |
| Cow position: | chr6:7253004-7253180 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 165, 90 |
| Conread position: | 29-266 |
| Cow position: | chr6:55935840-55936081 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 32-208 |
| Cow position: | chr6:39157841-39158023 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 33-262 |
| Cow position: | chr6:38641626-38641394 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 33-262 |
| Cow position: | chr6:54867651-54867413 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 33-262 |
| Cow position: | chr6:58074181-58073948 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 29, 186 |
| Conread position: | 36-260 |
| Cow position: | chr6:47204605-47204377 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 39-262 |
| Cow position: | chr6:38614939-38614719 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 40-233 |
| Cow position: | chr6:59633262-59633063 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 45-271 |
| Cow position: | chr6:35415395-35415629 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 46-262 |
| Cow position: | chr6:11789508-11789302 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 47-248 |
| Cow position: | chr6:55892886-55892684 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 48-262 |
| Cow position: | chr6:12387220-12387424 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 60-263 |
| Cow position: | chr6:16423806-16423599 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 83-258 |
| Cow position: | chr6:58316127-58315950 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 89-253 |
| Cow position: | chr6:50800343-50800502 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 89-269 |
| Cow position: | chr6:22969155-22968974 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 93-262 |
| Cow position: | chr6:54807295-54807127 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 100-259 |
| Cow position: | chr6:1907607-1907447 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 104-261 |
| Cow position: | chr6:56041566-56041723 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 138, 48 |
| Conread position: | 107-258 |
| Cow position: | chr6:28164855-28164702 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 112-262 |
| Cow position: | chr6:47624912-47625063 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 130-260 |
| Cow position: | chr6:60153069-60152938 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 135-263 |
| Cow position: | chr6:17669322-17669194 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 160-263 |
| Cow position: | chr6:1890840-1890946 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.