Cow genome map
| Conread name: | Pig1-92K11 |
| Conread position: | 1-120 |
| Cow position: | chr9:36827603-36827723 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-127 |
| Cow position: | chr9:39109098-39108969 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 1-128 |
| Cow position: | chr9:9760948-9761074 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-128 |
| Cow position: | chr9:20668291-20668409 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-142 |
| Cow position: | chr9:53794623-53794482 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 98, 66 |
| Conread position: | 1-183 |
| Cow position: | chr9:40007767-40007946 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-187 |
| Cow position: | chr9:20200197-20200385 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 136 |
| Conread position: | 1-191 |
| Cow position: | chr9:50522433-50522254 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-193 |
| Cow position: | chr9:50828017-50827834 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-194 |
| Cow position: | chr9:4538954-4538758 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 1-205 |
| Cow position: | chr9:16118633-16118838 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 1-210 |
| Cow position: | chr9:49651633-49651840 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-215 |
| Cow position: | chr9:5340518-5340727 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 1-217 |
| Cow position: | chr9:18237252-18237053 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-218 |
| Cow position: | chr9:50598408-50598191 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 168, 84 |
| Conread position: | 1-224 |
| Cow position: | chr9:33059367-33059151 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 178, 135 |
| Conread position: | 1-232 |
| Cow position: | chr9:5172237-5172470 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 1-232 |
| Cow position: | chr9:33668633-33668868 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 188 |
| Conread position: | 1-236 |
| Cow position: | chr9:6203882-6203653 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-240 |
| Cow position: | chr9:21462961-21462716 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 238 |
| Conread position: | 1-240 |
| Cow position: | chr9:32266483-32266249 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 98, 130 |
| Conread position: | 1-243 |
| Cow position: | chr9:58699223-58698960 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-248 |
| Cow position: | chr9:25468960-25469191 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 193, 49 |
| Conread position: | 1-248 |
| Cow position: | chr9:30019886-30020122 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 194, 16 |
| Conread position: | 1-257 |
| Cow position: | chr9:16745584-16745840 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 1-258 |
| Cow position: | chr9:24837442-24837695 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 172 |
| Conread position: | 1-258 |
| Cow position: | chr9:25972413-25972663 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 193, 55 |
| Conread position: | 1-258 |
| Cow position: | chr9:27292374-27292118 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 1-260 |
| Cow position: | chr9:8950800-8951071 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 159 |
| Conread position: | 1-260 |
| Cow position: | chr9:34106618-34106889 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 1-260 |
| Cow position: | chr9:55562401-55562661 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 154 |
| Conread position: | 1-261 |
| Cow position: | chr9:3931867-3932131 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 1-261 |
| Cow position: | chr9:8599511-8599768 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 1-261 |
| Cow position: | chr9:8657526-8657270 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 97, 152 |
| Conread position: | 1-261 |
| Cow position: | chr9:9315210-9315471 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 1-261 |
| Cow position: | chr9:10667119-10666860 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 1-261 |
| Cow position: | chr9:20896807-20897069 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 1-261 |
| Cow position: | chr9:23042682-23042944 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 133 |
| Conread position: | 1-261 |
| Cow position: | chr9:38546323-38546582 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 1-261 |
| Cow position: | chr9:47925828-47926077 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 140 |
| Conread position: | 1-261 |
| Cow position: | chr9:48773254-48773511 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 1-262 |
| Cow position: | chr9:9200817-9200556 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 1-262 |
| Cow position: | chr9:11102895-11102646 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 128 |
| Conread position: | 1-262 |
| Cow position: | chr9:15006844-15006586 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 29 |
| Conread position: | 1-262 |
| Cow position: | chr9:18093738-18093494 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 196, 69 |
| Conread position: | 1-262 |
| Cow position: | chr9:18110958-18110696 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 16 |
| Conread position: | 1-262 |
| Cow position: | chr9:19382235-19382493 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 129 |
| Conread position: | 1-262 |
| Cow position: | chr9:32115694-32115441 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 1-262 |
| Cow position: | chr9:32817237-32816965 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-262 |
| Cow position: | chr9:32847794-32848060 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 146 |
| Conread position: | 1-262 |
| Cow position: | chr9:34309933-34310199 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 132 |
| Conread position: | 1-262 |
| Cow position: | chr9:39152775-39152513 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 230 |
| Conread position: | 1-262 |
| Cow position: | chr9:39428895-39428631 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 239 |
| Conread position: | 1-262 |
| Cow position: | chr9:42173281-42173023 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 224, 113 |
| Conread position: | 1-262 |
| Cow position: | chr9:48133636-48133898 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 1-262 |
| Cow position: | chr9:54206420-54206162 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 97, 135 |
| Conread position: | 1-262 |
| Cow position: | chr9:56860921-56861183 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 1-262 |
| Cow position: | chr9:64007976-64007696 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 165, 19 |
| Conread position: | 1-265 |
| Cow position: | chr9:43037387-43037650 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 95, 146 |
| Conread position: | 1-266 |
| Cow position: | chr9:20039224-20038972 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-266 |
| Cow position: | chr9:20839533-20839790 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 145 |
| Conread position: | 1-271 |
| Cow position: | chr9:46252728-46252988 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 69 |
| Conread position: | 2-147 |
| Cow position: | chr9:48576736-48576592 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 2-160 |
| Cow position: | chr9:12498916-12499077 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 149 |
| Conread position: | 2-171 |
| Cow position: | chr9:43926201-43926036 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-187 |
| Cow position: | chr9:17110679-17110863 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-259 |
| Cow position: | chr9:3169617-3169358 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 2-260 |
| Cow position: | chr9:58669287-58669544 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 107 |
| Conread position: | 2-261 |
| Cow position: | chr9:29808358-29808630 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 2-261 |
| Cow position: | chr9:51311579-51311837 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 2-262 |
| Cow position: | chr9:10127761-10127503 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 2-262 |
| Cow position: | chr9:41957712-41957973 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 152 |
| Conread position: | 2-262 |
| Cow position: | chr9:43870879-43871148 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 2-262 |
| Cow position: | chr9:54437169-54437430 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 2-263 |
| Cow position: | chr9:15684881-15684622 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 2-266 |
| Cow position: | chr9:35708713-35708449 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 140, 210 |
| Conread position: | 3-245 |
| Cow position: | chr9:34204036-34204282 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 153 |
| Conread position: | 3-253 |
| Cow position: | chr9:34725603-34725354 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 3-262 |
| Cow position: | chr9:5575222-5575488 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 63, 136 |
| Conread position: | 4-172 |
| Cow position: | chr9:38926992-38927158 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 4-196 |
| Cow position: | chr9:5059407-5059218 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 4-257 |
| Cow position: | chr9:8617726-8617965 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 4-261 |
| Cow position: | chr9:2114099-2113840 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 4-262 |
| Cow position: | chr9:59924459-59924712 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 191, 40 |
| Conread position: | 4-266 |
| Cow position: | chr9:50544729-50544455 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 60, 272 |
| Conread position: | 4-269 |
| Cow position: | chr9:3958974-3959232 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 5-260 |
| Cow position: | chr9:2887883-2888137 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 5-261 |
| Cow position: | chr9:11870116-11870374 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 216 |
| Conread position: | 6-228 |
| Cow position: | chr9:15033818-15034043 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 73 |
| Conread position: | 6-269 |
| Cow position: | chr9:14184576-14184837 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 11 |
| Conread position: | 8-262 |
| Cow position: | chr9:44217686-44217929 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 230, 17 |
| Conread position: | 8-262 |
| Cow position: | chr9:46242346-46242095 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 131, 91 |
| Conread position: | 8-263 |
| Cow position: | chr9:64104854-64105112 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 8-266 |
| Cow position: | chr9:5071689-5071432 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 8-266 |
| Cow position: | chr9:5263411-5263673 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 9-260 |
| Cow position: | chr9:19493554-19493296 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 9-272 |
| Cow position: | chr9:2481735-2481998 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 10-247 |
| Cow position: | chr9:3845293-3845063 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 185, 64 |
| Conread position: | 10-258 |
| Cow position: | chr9:4858448-4858707 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 52, 135 |
| Conread position: | 10-262 |
| Cow position: | chr9:35368558-35368809 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 185, 79 |
| Conread position: | 10-263 |
| Cow position: | chr9:8740450-8740686 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 185, 86 |
| Conread position: | 11-254 |
| Cow position: | chr9:11304161-11303917 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 12-258 |
| Cow position: | chr9:4861298-4861553 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 12-261 |
| Cow position: | chr9:15951241-15950991 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 12-261 |
| Cow position: | chr9:37099320-37099064 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 12-261 |
| Cow position: | chr9:42037568-42037820 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 213 |
| Conread position: | 12-262 |
| Cow position: | chr9:34902186-34901947 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 13-200 |
| Cow position: | chr9:21956640-21956823 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 168, 120 |
| Conread position: | 13-256 |
| Cow position: | chr9:62763118-62763363 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 178, 37 |
| Conread position: | 13-262 |
| Cow position: | chr9:8914198-8914431 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 229, 82 |
| Conread position: | 13-262 |
| Cow position: | chr9:10981196-10980952 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 19-261 |
| Cow position: | chr9:41958863-41958631 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 22-193 |
| Cow position: | chr9:20389205-20389034 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 24-261 |
| Cow position: | chr9:44552674-44552915 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 128 |
| Conread position: | 25-248 |
| Cow position: | chr9:11201518-11201744 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 212 |
| Conread position: | 25-255 |
| Cow position: | chr9:61195211-61195441 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 25-261 |
| Cow position: | chr9:32624936-32625172 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 122 |
| Conread position: | 25-262 |
| Cow position: | chr9:11363825-11364060 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 25-262 |
| Cow position: | chr9:44108905-44108662 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 26-225 |
| Cow position: | chr9:18206576-18206378 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 26-262 |
| Cow position: | chr9:214531-214299 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 26-262 |
| Cow position: | chr9:56252830-56253066 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 92 |
| Conread position: | 28-259 |
| Cow position: | chr9:54924551-54924788 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 28-262 |
| Cow position: | chr9:9552020-9552256 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 28-264 |
| Cow position: | chr9:24872766-24873002 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 30-257 |
| Cow position: | chr9:52633557-52633331 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 61 |
| Conread position: | 30-259 |
| Cow position: | chr9:43911863-43912091 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 31-193 |
| Cow position: | chr9:23943213-23943380 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 31-260 |
| Cow position: | chr9:34093501-34093263 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 31-262 |
| Cow position: | chr9:24399746-24399517 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 31-266 |
| Cow position: | chr9:23527850-23527620 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 145, 20 |
| Conread position: | 32-262 |
| Cow position: | chr9:8534756-8534516 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 32-266 |
| Cow position: | chr9:9956759-9956997 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 93, 127 |
| Conread position: | 33-172 |
| Cow position: | chr9:5650322-5650180 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 33-261 |
| Cow position: | chr9:12355795-12356024 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 33-262 |
| Cow position: | chr9:30477839-30477612 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 34-259 |
| Cow position: | chr9:14960885-14961113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 36-266 |
| Cow position: | chr9:19637690-19637467 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 38-259 |
| Cow position: | chr9:5029451-5029681 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 40-209 |
| Cow position: | chr9:13761042-13761217 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 40-263 |
| Cow position: | chr9:24997574-24997351 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 42-246 |
| Cow position: | chr9:58853456-58853668 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 43-261 |
| Cow position: | chr9:50296087-50295858 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 47-261 |
| Cow position: | chr9:30440655-30440439 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 50-262 |
| Cow position: | chr9:47876005-47875789 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 53-262 |
| Cow position: | chr9:52787582-52787368 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 56-215 |
| Cow position: | chr9:2244126-2243965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 56-262 |
| Cow position: | chr9:34762891-34762683 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 167 |
| Conread position: | 74-262 |
| Cow position: | chr9:42901023-42901213 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 81-261 |
| Cow position: | chr9:31588118-31587931 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 88-262 |
| Cow position: | chr9:3725068-3724892 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 110, 58 |
| Conread position: | 92-232 |
| Cow position: | chr9:50003990-50004132 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 95-262 |
| Cow position: | chr9:29108539-29108707 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 110-260 |
| Cow position: | chr9:30189113-30189263 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 115-256 |
| Cow position: | chr9:43814464-43814605 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 121, 102 |
| Conread position: | 119-261 |
| Cow position: | chr9:27052314-27052169 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 120-262 |
| Cow position: | chr9:26828796-26828656 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 120-268 |
| Cow position: | chr9:8612306-8612458 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 125-261 |
| Cow position: | chr9:8600359-8600501 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 154-261 |
| Cow position: | chr9:23443618-23443727 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 154-261 |
| Cow position: | chr9:23450569-23450678 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 156-262 |
| Cow position: | chr9:17806056-17806165 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.