Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-413 |
| Cow position: | chr10:41985258-41984842 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 1-485 |
| Cow position: | chr10:16587205-16587675 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 196 |
| Conread position: | 1-576 |
| Cow position: | chr10:45113644-45114205 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 73 |
| Conread position: | 12-401 |
| Cow position: | chr10:23949277-23948886 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 55-423 |
| Cow position: | chr10:17887531-17887897 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 82-356 |
| Cow position: | chr10:65734667-65734932 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 82-583 |
| Cow position: | chr10:1004378-1004862 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 149 |
| Conread position: | 83-339 |
| Cow position: | chr10:28450994-28450737 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 164 |
| Conread position: | 84-338 |
| Cow position: | chr10:42118437-42118688 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 87-298 |
| Cow position: | chr10:25293515-25293728 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 156-428 |
| Cow position: | chr10:33605500-33605227 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 168-428 |
| Cow position: | chr10:22905974-22905704 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 229-428 |
| Cow position: | chr10:52815096-52815296 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 80, 28 |
| Conread position: | 253-475 |
| Cow position: | chr10:59546394-59546171 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 253-584 |
| Cow position: | chr10:50963920-50964242 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 173, 58 |
| Conread position: | 253-585 |
| Cow position: | chr10:31543396-31543704 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 253-585 |
| Cow position: | chr10:64219819-64219515 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 254-405 |
| Cow position: | chr10:270374-270519 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 254-579 |
| Cow position: | chr10:28527238-28526924 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 254-583 |
| Cow position: | chr10:28103941-28103613 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 237 |
| Conread position: | 256-585 |
| Cow position: | chr10:7507115-7506786 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 257-430 |
| Cow position: | chr10:34670378-34670541 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 257-585 |
| Cow position: | chr10:5745089-5744780 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 259-585 |
| Cow position: | chr10:29291085-29291412 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 260-477 |
| Cow position: | chr10:21392093-21391873 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 160, 199 |
| Conread position: | 260-532 |
| Cow position: | chr10:52342608-52342890 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 260-578 |
| Cow position: | chr10:38821546-38821844 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 256, 161 |
| Conread position: | 262-491 |
| Cow position: | chr10:20775252-20775469 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 265-470 |
| Cow position: | chr10:41265266-41265463 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 265-585 |
| Cow position: | chr10:58264685-58264365 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-585 |
| Cow position: | chr10:36425202-36424893 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 218 |
| Conread position: | 273-570 |
| Cow position: | chr10:12936770-12937069 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 274-553 |
| Cow position: | chr10:29822289-29822546 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 275-468 |
| Cow position: | chr10:60910088-60909898 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 275-584 |
| Cow position: | chr10:19540830-19540523 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 276-572 |
| Cow position: | chr10:2408010-2407726 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 301-585 |
| Cow position: | chr10:68794050-68794333 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 312-533 |
| Cow position: | chr10:47617549-47617336 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 313-585 |
| Cow position: | chr10:46451799-46451527 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 317-522 |
| Cow position: | chr10:49144190-49144396 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 329-585 |
| Cow position: | chr10:48479469-48479216 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 340-483 |
| Cow position: | chr10:68792878-68793021 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 342-569 |
| Cow position: | chr10:16554411-16554629 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 222, 78 |
| Conread position: | 342-578 |
| Cow position: | chr10:20258634-20258879 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 344-585 |
| Cow position: | chr10:33073889-33073645 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 345-585 |
| Cow position: | chr10:50162803-50163038 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 347-585 |
| Cow position: | chr10:57993941-57993701 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 157 |
| Conread position: | 355-585 |
| Cow position: | chr10:8861101-8861331 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 355-585 |
| Cow position: | chr10:32532317-32532544 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 358-528 |
| Cow position: | chr10:23873414-23873243 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 364-584 |
| Cow position: | chr10:50119912-50120132 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 365-563 |
| Cow position: | chr10:39645807-39645993 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 371-570 |
| Cow position: | chr10:6225353-6225162 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 375-585 |
| Cow position: | chr10:52132241-52132450 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 378-570 |
| Cow position: | chr10:49058477-49058671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 384-530 |
| Cow position: | chr10:19597207-19597063 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 391-576 |
| Cow position: | chr10:30721327-30721510 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 415-585 |
| Cow position: | chr10:26731035-26730867 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.