Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-348 |
| Cow position: | chr12:24020354-24020683 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 132, 86 |
| Conread position: | 1-402 |
| Cow position: | chr12:24558965-24559377 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 246 |
| Conread position: | 7-321 |
| Cow position: | chr12:32987328-32987637 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 7-397 |
| Cow position: | chr12:30596097-30596481 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 69-427 |
| Cow position: | chr12:23983358-23983704 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 82-313 |
| Cow position: | chr12:25550576-25550336 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 82-585 |
| Cow position: | chr12:8909472-8908989 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 90-384 |
| Cow position: | chr12:10028613-10028888 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 95-377 |
| Cow position: | chr12:1504745-1505017 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 107-477 |
| Cow position: | chr12:36049132-36049491 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 152-384 |
| Cow position: | chr12:37394484-37394726 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 184-514 |
| Cow position: | chr12:8486125-8485818 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 144, 39 |
| Conread position: | 221-543 |
| Cow position: | chr12:25901889-25901562 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 193 |
| Conread position: | 255-477 |
| Cow position: | chr12:33875688-33875473 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 256-585 |
| Cow position: | chr12:10202409-10202106 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 260-428 |
| Cow position: | chr12:28738499-28738658 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 276-583 |
| Cow position: | chr12:27437787-27437477 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 218 |
| Conread position: | 280-489 |
| Cow position: | chr12:8767440-8767234 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 309-468 |
| Cow position: | chr12:12869340-12869493 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 324-585 |
| Cow position: | chr12:10760947-10760690 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 329-585 |
| Cow position: | chr12:11352577-11352319 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 339-515 |
| Cow position: | chr12:30506986-30506811 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 345-544 |
| Cow position: | chr12:31208995-31209187 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 348-585 |
| Cow position: | chr12:31805778-31806010 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 5, 146 |
| Conread position: | 353-550 |
| Cow position: | chr12:36249849-36249647 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 353-575 |
| Cow position: | chr12:15034046-15033818 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 33, 162 |
| Conread position: | 397-583 |
| Cow position: | chr12:47826365-47826539 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 409-585 |
| Cow position: | chr12:29852566-29852383 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 412-582 |
| Cow position: | chr12:34133406-34133236 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-565 |
| Cow position: | chr12:36324126-36323990 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 6 |
| Conread position: | 437-578 |
| Cow position: | chr12:7089181-7089035 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 439-578 |
| Cow position: | chr12:4734000-4734138 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 57 |
Show alignments to all cow chromosomes.