Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-426 |
| Cow position: | chr13:34333630-34334037 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 4-429 |
| Cow position: | chr13:32535970-32535557 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 9-577 |
| Cow position: | chr13:6178033-6178592 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 51 |
| Conread position: | 9-579 |
| Cow position: | chr13:4947726-4947158 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 174 |
| Conread position: | 77-320 |
| Cow position: | chr13:1839627-1839391 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 82-420 |
| Cow position: | chr13:10932794-10932460 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 82-431 |
| Cow position: | chr13:47863457-47863805 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 82-443 |
| Cow position: | chr13:52285057-52284700 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 82-470 |
| Cow position: | chr13:57745858-57746245 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 82-585 |
| Cow position: | chr13:21677489-21676988 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 84-418 |
| Cow position: | chr13:55406425-55406746 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 86-570 |
| Cow position: | chr13:16041272-16040812 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 96-402 |
| Cow position: | chr13:11767817-11768117 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 102-412 |
| Cow position: | chr13:22276950-22277260 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 103-405 |
| Cow position: | chr13:15747173-15746862 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 30, 221 |
| Conread position: | 177-420 |
| Cow position: | chr13:20180560-20180323 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 64 |
| Conread position: | 225-578 |
| Cow position: | chr13:52833651-52833289 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 241-491 |
| Cow position: | chr13:20656525-20656773 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 241-492 |
| Cow position: | chr13:33239713-33239963 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 250-506 |
| Cow position: | chr13:4546447-4546193 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 252-553 |
| Cow position: | chr13:47325681-47325375 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 230, 13 |
| Conread position: | 253-561 |
| Cow position: | chr13:46131805-46131502 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 253-570 |
| Cow position: | chr13:19451629-19451930 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 7 |
| Conread position: | 260-462 |
| Cow position: | chr13:40789375-40789560 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 260-577 |
| Cow position: | chr13:17127538-17127225 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 272-448 |
| Cow position: | chr13:39594555-39594727 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 274-475 |
| Cow position: | chr13:31835711-31835504 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 274-491 |
| Cow position: | chr13:28605638-28605861 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 280-496 |
| Cow position: | chr13:19115654-19115865 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 200, 29 |
| Conread position: | 303-567 |
| Cow position: | chr13:24739897-24740148 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 304-579 |
| Cow position: | chr13:29671583-29671856 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 311-585 |
| Cow position: | chr13:9714676-9714942 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 314-510 |
| Cow position: | chr13:51682111-51682301 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 317-565 |
| Cow position: | chr13:34502243-34502487 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 335-585 |
| Cow position: | chr13:4441567-4441308 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 340-446 |
| Cow position: | chr13:11422259-11422153 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 340-576 |
| Cow position: | chr13:4498297-4498523 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 353-585 |
| Cow position: | chr13:22976971-22976744 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 364-585 |
| Cow position: | chr13:16342925-16342712 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 378-585 |
| Cow position: | chr13:18052321-18052528 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 392-578 |
| Cow position: | chr13:9083470-9083663 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 397-567 |
| Cow position: | chr13:47371242-47371400 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 408-549 |
| Cow position: | chr13:3167595-3167455 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 434-565 |
| Cow position: | chr13:62264180-62264309 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.