Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-313 |
| Cow position: | chr15:46868283-46868590 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 1-422 |
| Cow position: | chr15:40065272-40065679 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 166 |
| Conread position: | 1-457 |
| Cow position: | chr15:32878137-32878599 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 86 |
| Conread position: | 1-486 |
| Cow position: | chr15:31855101-31855562 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 1-570 |
| Cow position: | chr15:13681282-13681819 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 1-584 |
| Cow position: | chr15:38817986-38818555 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 4-553 |
| Cow position: | chr15:11675213-11675757 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 246 |
| Conread position: | 7-430 |
| Cow position: | chr15:18715651-18715242 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 177 |
| Conread position: | 77-323 |
| Cow position: | chr15:50059211-50059460 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 82-402 |
| Cow position: | chr15:9928702-9928391 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 82-585 |
| Cow position: | chr15:3582330-3581845 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 94-585 |
| Cow position: | chr15:13691056-13691523 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 197-490 |
| Cow position: | chr15:45665459-45665745 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 261, 29 |
| Conread position: | 223-428 |
| Cow position: | chr15:43275084-43275286 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 239-585 |
| Cow position: | chr15:8062190-8062537 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 241-439 |
| Cow position: | chr15:21298797-21298998 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 241-570 |
| Cow position: | chr15:29032882-29033200 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 241-570 |
| Cow position: | chr15:29205302-29205623 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 245-486 |
| Cow position: | chr15:11997612-11997848 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 178, 20 |
| Conread position: | 250-582 |
| Cow position: | chr15:2436985-2437311 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 184, 15 |
| Conread position: | 254-572 |
| Cow position: | chr15:35739767-35740082 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 259-502 |
| Cow position: | chr15:26754912-26755145 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 259-557 |
| Cow position: | chr15:19214215-19213920 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 9, 167 |
| Conread position: | 261-486 |
| Cow position: | chr15:578933-579158 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 278-585 |
| Cow position: | chr15:1233765-1233458 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 278-585 |
| Cow position: | chr15:1241115-1240808 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 280-491 |
| Cow position: | chr15:35042279-35042484 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 283-585 |
| Cow position: | chr15:40991407-40991707 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 309-515 |
| Cow position: | chr15:13057165-13056962 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 145 |
| Conread position: | 311-553 |
| Cow position: | chr15:15866012-15866239 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 312-585 |
| Cow position: | chr15:49302176-49301908 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 313-561 |
| Cow position: | chr15:34119545-34119289 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 29 |
| Conread position: | 326-553 |
| Cow position: | chr15:26546969-26547186 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 336-486 |
| Cow position: | chr15:52131791-52131937 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 344-578 |
| Cow position: | chr15:12300790-12300556 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 345-559 |
| Cow position: | chr15:18834502-18834715 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 352-578 |
| Cow position: | chr15:19404680-19404456 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 362-569 |
| Cow position: | chr15:6084823-6085029 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 375-572 |
| Cow position: | chr15:30822528-30822719 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 385-585 |
| Cow position: | chr15:38634954-38634754 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 397-582 |
| Cow position: | chr15:51047189-51047012 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 403-584 |
| Cow position: | chr15:22431343-22431171 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 413-575 |
| Cow position: | chr15:8442218-8442055 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 427-572 |
| Cow position: | chr15:48426991-48427140 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.