Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-394 |
| Cow position: | chr17:1653977-1653602 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 1-420 |
| Cow position: | chr17:10271205-10271607 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 132, 83 |
| Conread position: | 1-420 |
| Cow position: | chr17:11171500-11171909 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 77 |
| Conread position: | 4-375 |
| Cow position: | chr17:4299332-4299686 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 5-402 |
| Cow position: | chr17:37342765-37342389 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 67 |
| Conread position: | 7-428 |
| Cow position: | chr17:11374979-11374573 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 31-532 |
| Cow position: | chr17:3139584-3140072 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 71-428 |
| Cow position: | chr17:28847892-28847537 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 82-420 |
| Cow position: | chr17:8279923-8279591 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 97-585 |
| Cow position: | chr17:14303923-14303446 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 132-446 |
| Cow position: | chr17:37778779-37778476 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 235-436 |
| Cow position: | chr17:24609057-24609253 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 241-562 |
| Cow position: | chr17:35457851-35458155 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 246-486 |
| Cow position: | chr17:40391736-40391496 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 253-481 |
| Cow position: | chr17:20208569-20208344 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 257-471 |
| Cow position: | chr17:67770-67560 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 260-553 |
| Cow position: | chr17:5990600-5990315 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 261-585 |
| Cow position: | chr17:226026-226349 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 71 |
| Conread position: | 264-585 |
| Cow position: | chr17:5248390-5248712 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 276-532 |
| Cow position: | chr17:31923758-31923510 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 278-550 |
| Cow position: | chr17:10831228-10830960 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 279-583 |
| Cow position: | chr17:24337123-24337418 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 283-552 |
| Cow position: | chr17:5226566-5226297 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 287-575 |
| Cow position: | chr17:7683879-7684161 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 309-581 |
| Cow position: | chr17:14009345-14009082 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 336-585 |
| Cow position: | chr17:35038517-35038758 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 343-573 |
| Cow position: | chr17:9348660-9348890 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 44 |
| Conread position: | 345-585 |
| Cow position: | chr17:35619311-35619062 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 197 |
| Conread position: | 347-585 |
| Cow position: | chr17:10041072-10040838 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 361-571 |
| Cow position: | chr17:27940223-27940008 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 366-553 |
| Cow position: | chr17:37722785-37722599 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 389-577 |
| Cow position: | chr17:12179389-12179200 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 416-585 |
| Cow position: | chr17:28800288-28800114 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 432-561 |
| Cow position: | chr17:30147475-30147347 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 433-552 |
| Cow position: | chr17:27234370-27234489 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.