Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-288 |
| Cow position: | chr2:70708336-70708052 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 1-439 |
| Cow position: | chr2:62674565-62674142 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 132, 69 |
| Conread position: | 1-446 |
| Cow position: | chr2:71495031-71495497 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 45, 184 |
| Conread position: | 1-583 |
| Cow position: | chr2:79076030-79075476 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 1-585 |
| Cow position: | chr2:16123437-16122872 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 148 |
| Conread position: | 1-585 |
| Cow position: | chr2:62564022-62563449 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 77 |
| Conread position: | 4-428 |
| Cow position: | chr2:10295769-10296180 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 4-439 |
| Cow position: | chr2:26219600-26220023 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 74 |
| Conread position: | 7-402 |
| Cow position: | chr2:70580041-70579645 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 71 |
| Conread position: | 7-417 |
| Cow position: | chr2:41313570-41313967 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 127, 77 |
| Conread position: | 7-420 |
| Cow position: | chr2:62819043-62818629 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 7-585 |
| Cow position: | chr2:42733432-42734012 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 173 |
| Conread position: | 13-428 |
| Cow position: | chr2:39855465-39855877 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 13-562 |
| Cow position: | chr2:25056636-25057155 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 19-420 |
| Cow position: | chr2:82311513-82311122 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 58 |
| Conread position: | 70-420 |
| Cow position: | chr2:425554-425891 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 71-421 |
| Cow position: | chr2:14465819-14465481 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 77-570 |
| Cow position: | chr2:4670540-4671023 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 82-310 |
| Cow position: | chr2:22035395-22035612 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 82-420 |
| Cow position: | chr2:29382929-29382603 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 82-463 |
| Cow position: | chr2:10485300-10485658 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 96-428 |
| Cow position: | chr2:14219349-14219659 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 107-408 |
| Cow position: | chr2:793419-793712 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 107-413 |
| Cow position: | chr2:26042467-26042170 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 203, 29 |
| Conread position: | 107-577 |
| Cow position: | chr2:3628406-3627954 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 111-414 |
| Cow position: | chr2:70663789-70664088 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 124-492 |
| Cow position: | chr2:4927985-4927625 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 244-486 |
| Cow position: | chr2:32243691-32243457 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 245-578 |
| Cow position: | chr2:38383770-38384085 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 246-424 |
| Cow position: | chr2:717605-717432 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 250-489 |
| Cow position: | chr2:9532030-9532272 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 208 |
| Conread position: | 250-585 |
| Cow position: | chr2:16415831-16416150 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 250-585 |
| Cow position: | chr2:26879306-26879628 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 253-457 |
| Cow position: | chr2:62037553-62037349 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 253-584 |
| Cow position: | chr2:17231634-17231315 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 256-505 |
| Cow position: | chr2:46251498-46251264 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 189, 55 |
| Conread position: | 259-585 |
| Cow position: | chr2:42592351-42592653 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 260-541 |
| Cow position: | chr2:24830717-24830448 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 260-576 |
| Cow position: | chr2:10282575-10282886 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 253, 63 |
| Conread position: | 260-585 |
| Cow position: | chr2:50809219-50809541 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 260-585 |
| Cow position: | chr2:51192071-51191739 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 125 |
| Conread position: | 261-548 |
| Cow position: | chr2:84132793-84133074 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 262-547 |
| Cow position: | chr2:79907228-79906939 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 262-585 |
| Cow position: | chr2:18018599-18018276 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 266-585 |
| Cow position: | chr2:5716288-5716598 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 273-582 |
| Cow position: | chr2:22132442-22132150 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 274-581 |
| Cow position: | chr2:12446851-12446557 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 274-584 |
| Cow position: | chr2:45470739-45471035 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 261, 58 |
| Conread position: | 275-585 |
| Cow position: | chr2:61078385-61078688 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 276-577 |
| Cow position: | chr2:1437240-1437532 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 277-582 |
| Cow position: | chr2:26874268-26874570 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 281-585 |
| Cow position: | chr2:69702292-69701987 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 287-575 |
| Cow position: | chr2:52653073-52652806 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 307-578 |
| Cow position: | chr2:33341705-33341435 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 312-568 |
| Cow position: | chr2:62502900-62503157 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 186 |
| Conread position: | 315-585 |
| Cow position: | chr2:48441112-48440848 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 186, 14 |
| Conread position: | 320-453 |
| Cow position: | chr2:44721342-44721472 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 321-484 |
| Cow position: | chr2:69638786-69638624 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 329-553 |
| Cow position: | chr2:3831748-3831532 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 335-486 |
| Cow position: | chr2:80604047-80603896 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-534 |
| Cow position: | chr2:59996512-59996316 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 336-578 |
| Cow position: | chr2:4125166-4124936 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 336-582 |
| Cow position: | chr2:56017922-56017681 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 341-585 |
| Cow position: | chr2:54469057-54468825 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 342-584 |
| Cow position: | chr2:79939369-79939129 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 40, 157 |
| Conread position: | 345-562 |
| Cow position: | chr2:85411574-85411360 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 161, 32 |
| Conread position: | 361-584 |
| Cow position: | chr2:1138702-1138486 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 368-585 |
| Cow position: | chr2:1633528-1633313 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 371-585 |
| Cow position: | chr2:67054456-67054251 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 378-562 |
| Cow position: | chr2:60947726-60947900 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 402-559 |
| Cow position: | chr2:28015951-28015798 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 410-584 |
| Cow position: | chr2:15242930-15242759 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 410-585 |
| Cow position: | chr2:717122-716951 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 43 |
| Conread position: | 411-585 |
| Cow position: | chr2:79240860-79240683 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 415-585 |
| Cow position: | chr2:7362060-7362226 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 417-576 |
| Cow position: | chr2:10989164-10989322 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 419-585 |
| Cow position: | chr2:6053533-6053363 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.