Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-542 |
| Cow position: | chr21:16332410-16332910 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 354 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 1-583 |
| Cow position: | chr21:20575727-20575183 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 4-426 |
| Cow position: | chr21:23500091-23499683 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 74 |
| Conread position: | 7-585 |
| Cow position: | chr21:30192455-30191883 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 82-428 |
| Cow position: | chr21:26614850-26614514 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 108-423 |
| Cow position: | chr21:16981719-16982017 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 208, 24 |
| Conread position: | 121-585 |
| Cow position: | chr21:22944568-22945032 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 133-399 |
| Cow position: | chr21:34141326-34141066 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 169-420 |
| Cow position: | chr21:32904257-32904015 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 84 |
| Conread position: | 241-528 |
| Cow position: | chr21:665168-664892 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 246-442 |
| Cow position: | chr21:3920996-3920805 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 246-485 |
| Cow position: | chr21:39075217-39074986 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 253-583 |
| Cow position: | chr21:41458484-41458159 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 259-486 |
| Cow position: | chr21:15543681-15543454 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 260-503 |
| Cow position: | chr21:45972413-45972178 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 260-536 |
| Cow position: | chr21:30859324-30859599 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 181, 229 |
| Conread position: | 260-585 |
| Cow position: | chr21:7646645-7646328 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 260-585 |
| Cow position: | chr21:37341883-37341565 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 262-491 |
| Cow position: | chr21:45962672-45962897 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 267-545 |
| Cow position: | chr21:12560459-12560183 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 275-425 |
| Cow position: | chr21:18511915-18512068 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 275-447 |
| Cow position: | chr21:25661584-25661758 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 276-585 |
| Cow position: | chr21:4775144-4775447 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 280-470 |
| Cow position: | chr21:2874731-2874545 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 297-550 |
| Cow position: | chr21:46327469-46327730 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 300-585 |
| Cow position: | chr21:28624732-28625013 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 98, 144 |
| Conread position: | 322-584 |
| Cow position: | chr21:26058053-26057796 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 324-585 |
| Cow position: | chr21:13160098-13160356 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 326-585 |
| Cow position: | chr21:38678097-38678346 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 336-549 |
| Cow position: | chr21:4011919-4012139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 145 |
| Conread position: | 357-565 |
| Cow position: | chr21:31479170-31479377 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 362-585 |
| Cow position: | chr21:41430102-41430325 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 193, 47 |
| Conread position: | 365-570 |
| Cow position: | chr21:6400379-6400169 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 373-565 |
| Cow position: | chr21:3808407-3808590 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 411-572 |
| Cow position: | chr21:9202908-9203067 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 411-585 |
| Cow position: | chr21:18512311-18512484 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 423-575 |
| Cow position: | chr21:31919722-31919871 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 427-585 |
| Cow position: | chr21:5974989-5975144 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.