Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-402 |
| Cow position: | chr24:30860267-30860670 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 248 |
| Conread position: | 4-571 |
| Cow position: | chr24:7030501-7029953 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 7-585 |
| Cow position: | chr24:16101385-16101917 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 35-402 |
| Cow position: | chr24:27054081-27054444 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 70-414 |
| Cow position: | chr24:34369300-34368961 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 158 |
| Conread position: | 70-573 |
| Cow position: | chr24:13783792-13783300 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 161 |
| Conread position: | 80-402 |
| Cow position: | chr24:14746354-14746682 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 82-402 |
| Cow position: | chr24:42943403-42943086 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 82-403 |
| Cow position: | chr24:28028986-28028674 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 82-411 |
| Cow position: | chr24:37386621-37386303 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 96-428 |
| Cow position: | chr24:25229324-25229005 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 134 |
| Conread position: | 158-428 |
| Cow position: | chr24:9035485-9035217 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 236-450 |
| Cow position: | chr24:16476584-16476801 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 72 |
| Conread position: | 249-428 |
| Cow position: | chr24:28440472-28440651 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 250-585 |
| Cow position: | chr24:43176364-43176703 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 251-486 |
| Cow position: | chr24:22839429-22839195 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 252-531 |
| Cow position: | chr24:37080541-37080276 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 80, 90 |
| Conread position: | 252-585 |
| Cow position: | chr24:37074760-37074430 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 260-570 |
| Cow position: | chr24:27229191-27228882 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 208 |
| Conread position: | 265-545 |
| Cow position: | chr24:5376191-5375916 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 271-584 |
| Cow position: | chr24:16190344-16190642 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 277-578 |
| Cow position: | chr24:29070284-29069988 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 279-583 |
| Cow position: | chr24:28060556-28060263 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 280-585 |
| Cow position: | chr24:25049920-25049611 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 287-496 |
| Cow position: | chr24:38643836-38644046 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 301-495 |
| Cow position: | chr24:36097693-36097888 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 302-578 |
| Cow position: | chr24:23040620-23040873 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 309-491 |
| Cow position: | chr24:17763033-17762854 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 310-585 |
| Cow position: | chr24:2075628-2075904 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 318-486 |
| Cow position: | chr24:37895013-37894852 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 322-478 |
| Cow position: | chr24:27732220-27732069 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 327-563 |
| Cow position: | chr24:2615887-2616123 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 329-579 |
| Cow position: | chr24:31104098-31104334 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 345-585 |
| Cow position: | chr24:23528343-23528103 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 352-585 |
| Cow position: | chr24:41241988-41242214 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 150 |
| Conread position: | 371-584 |
| Cow position: | chr24:5691850-5692066 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 385-553 |
| Cow position: | chr24:39209667-39209835 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-575 |
| Cow position: | chr24:27884348-27884173 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 391-577 |
| Cow position: | chr24:27078757-27078939 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 401-572 |
| Cow position: | chr24:24777369-24777534 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 416-572 |
| Cow position: | chr24:5873610-5873460 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 417-562 |
| Cow position: | chr24:15483246-15483387 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 430-585 |
| Cow position: | chr24:5531854-5532007 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 449-583 |
| Cow position: | chr24:21503866-21503736 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 461-585 |
| Cow position: | chr24:32418642-32418519 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.