Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-415 |
| Cow position: | chr28:25563747-25564160 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 1-426 |
| Cow position: | chr28:20265045-20265487 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 231 |
| Conread position: | 1-447 |
| Cow position: | chr28:6486267-6486701 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 77 |
| Conread position: | 7-403 |
| Cow position: | chr28:34208393-34208772 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 53-504 |
| Cow position: | chr28:480701-480273 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 69-578 |
| Cow position: | chr28:12226522-12226008 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 77-422 |
| Cow position: | chr28:11380299-11379958 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 82-584 |
| Cow position: | chr28:25306697-25307196 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 168 |
| Conread position: | 84-420 |
| Cow position: | chr28:21873523-21873840 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 84-428 |
| Cow position: | chr28:34636429-34636754 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 92-451 |
| Cow position: | chr28:13902196-13901865 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 229-422 |
| Cow position: | chr28:22829814-22830007 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 252-544 |
| Cow position: | chr28:11783819-11783534 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 252-585 |
| Cow position: | chr28:22202043-22202363 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 253-585 |
| Cow position: | chr28:28438466-28438795 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 260-501 |
| Cow position: | chr28:23155838-23156060 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 260-510 |
| Cow position: | chr28:22478750-22478981 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 260-585 |
| Cow position: | chr28:7595469-7595148 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 260-585 |
| Cow position: | chr28:21118463-21118148 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 272-533 |
| Cow position: | chr28:14555431-14555695 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 273-479 |
| Cow position: | chr28:25165837-25165638 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 274-553 |
| Cow position: | chr28:25315106-25315382 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 216, 56 |
| Conread position: | 287-491 |
| Cow position: | chr28:16805223-16805028 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 312-549 |
| Cow position: | chr28:3803126-3803364 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 201 |
| Conread position: | 314-585 |
| Cow position: | chr28:31415184-31414918 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 327-549 |
| Cow position: | chr28:22242310-22242100 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 178, 5 |
| Conread position: | 330-572 |
| Cow position: | chr28:3140004-3140242 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 140 |
| Conread position: | 336-571 |
| Cow position: | chr28:10163180-10163409 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 343-585 |
| Cow position: | chr28:16965840-16966094 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 130 |
| Conread position: | 346-519 |
| Cow position: | chr28:28780029-28780199 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 354-582 |
| Cow position: | chr28:24330464-24330241 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 383-585 |
| Cow position: | chr28:21941745-21941543 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-585 |
| Cow position: | chr28:21355611-21355790 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 388-583 |
| Cow position: | chr28:10574252-10574066 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 396-585 |
| Cow position: | chr28:1885323-1885510 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 407-571 |
| Cow position: | chr28:28042229-28042074 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 408-585 |
| Cow position: | chr28:10971448-10971626 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 409-585 |
| Cow position: | chr28:4404039-4404211 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 415-567 |
| Cow position: | chr28:5158398-5158552 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 456-585 |
| Cow position: | chr28:4047621-4047748 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.