Cow genome map
| Conread name: | Pig1-92K18 |
| Conread position: | 1-402 |
| Cow position: | chr8:42139364-42138980 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 1-420 |
| Cow position: | chr8:13809885-13810291 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 1-431 |
| Cow position: | chr8:21078211-21078635 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 1-561 |
| Cow position: | chr8:8278533-8277986 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 4-399 |
| Cow position: | chr8:8134836-8134434 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 263 |
| Conread position: | 8-428 |
| Cow position: | chr8:5219799-5219389 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 9-585 |
| Cow position: | chr8:6585619-6586174 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 82-532 |
| Cow position: | chr8:31262457-31262891 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 95-414 |
| Cow position: | chr8:51905278-51904958 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 150 |
| Conread position: | 227-431 |
| Cow position: | chr8:54158625-54158827 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 229-584 |
| Cow position: | chr8:19498263-19497910 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 230-585 |
| Cow position: | chr8:46714495-46714152 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 236-488 |
| Cow position: | chr8:23440909-23440667 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 244, 15 |
| Conread position: | 252-452 |
| Cow position: | chr8:43379547-43379750 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 252-491 |
| Cow position: | chr8:4336854-4336614 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 252-576 |
| Cow position: | chr8:53942776-53942441 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 317 |
| Conread position: | 252-585 |
| Cow position: | chr8:46451855-46451535 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 123, 35 |
| Conread position: | 253-481 |
| Cow position: | chr8:51633995-51633765 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 253-584 |
| Cow position: | chr8:41411438-41411757 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 257-563 |
| Cow position: | chr8:60055570-60055267 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 69 |
| Conread position: | 257-576 |
| Cow position: | chr8:43399181-43398864 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 52, 92 |
| Conread position: | 259-436 |
| Cow position: | chr8:21078747-21078925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 260-426 |
| Cow position: | chr8:51588673-51588513 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 260-578 |
| Cow position: | chr8:8724215-8723905 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 260-581 |
| Cow position: | chr8:18791478-18791188 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 262-584 |
| Cow position: | chr8:16648485-16648171 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 262-585 |
| Cow position: | chr8:21945644-21945964 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 271-484 |
| Cow position: | chr8:38987083-38987296 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 272-584 |
| Cow position: | chr8:58291473-58291162 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 161, 57 |
| Conread position: | 272-584 |
| Cow position: | chr8:59061577-59061891 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 273-452 |
| Cow position: | chr8:11974685-11974863 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 273-549 |
| Cow position: | chr8:37381375-37381642 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 180, 42 |
| Conread position: | 274-495 |
| Cow position: | chr8:40273414-40273192 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 274-567 |
| Cow position: | chr8:24890165-24890450 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 274-578 |
| Cow position: | chr8:18984664-18984366 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 274-585 |
| Cow position: | chr8:5503586-5503888 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 275-584 |
| Cow position: | chr8:39097887-39097583 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 279-529 |
| Cow position: | chr8:26701530-26701776 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 280-585 |
| Cow position: | chr8:4999257-4999558 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 175 |
| Conread position: | 294-562 |
| Cow position: | chr8:1386228-1386487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 307-485 |
| Cow position: | chr8:22102932-22102754 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-578 |
| Cow position: | chr8:7354584-7354319 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 186 |
| Conread position: | 336-482 |
| Cow position: | chr8:18801527-18801673 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-584 |
| Cow position: | chr8:26158419-26158660 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 342-514 |
| Cow position: | chr8:29967263-29967429 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 170, 70 |
| Conread position: | 352-585 |
| Cow position: | chr8:59727899-59728121 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 354-585 |
| Cow position: | chr8:51919906-51919677 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 373-585 |
| Cow position: | chr8:31495138-31495350 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 375-567 |
| Cow position: | chr8:16060116-16059928 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 113, 39 |
| Conread position: | 383-585 |
| Cow position: | chr8:5185863-5186058 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 387-567 |
| Cow position: | chr8:26867657-26867835 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 388-582 |
| Cow position: | chr8:25050068-25050262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 163, 94 |
| Conread position: | 393-585 |
| Cow position: | chr8:43974676-43974493 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 420-570 |
| Cow position: | chr8:45702097-45701947 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-585 |
| Cow position: | chr8:53887052-53887205 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 433-585 |
| Cow position: | chr8:24766761-24766613 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 439-585 |
| Cow position: | chr8:38234046-38233895 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.