Cow genome map

Conread name: Pig1-93L05

Conread position: 46-320
Cow position: chr21:26567433-26567725 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 270

Conread position: 47-408
Cow position: chr21:39401930-39401549 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 222

Conread position: 50-390
Cow position: chr21:36910231-36909906 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 278, 18

Conread position: 52-302
Cow position: chr21:11363975-11363736 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 215, 14

Conread position: 53-244
Cow position: chr21:30259886-30260077 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 47

Conread position: 54-337
Cow position: chr21:5392228-5392501 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 75, 105

Conread position: 54-338
Cow position: chr21:33351048-33350776 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 54-338
Cow position: chr21:42384811-42384542 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 14

Conread position: 54-347
Cow position: chr21:42562929-42562658 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 81

Conread position: 54-407
Cow position: chr21:27625024-27624665 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 23

Conread position: 55-297
Cow position: chr21:26658686-26658907 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 55-337
Cow position: chr21:17265682-17265966 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 13

Conread position: 56-303
Cow position: chr21:12200426-12200169 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 57-289
Cow position: chr21:35569066-35569281 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 62-338
Cow position: chr21:2809863-2810125 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 92

Conread position: 63-336
Cow position: chr21:46470490-46470222 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 44

Conread position: 64-335
Cow position: chr21:6998253-6997977 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 11

Conread position: 64-338
Cow position: chr21:7268570-7268848 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 215

Conread position: 65-302
Cow position: chr21:5962074-5961847 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 65-332
Cow position: chr21:20260031-20260279 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 65-336
Cow position: chr21:10515101-10514842 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 217, 72

Conread position: 65-338
Cow position: chr21:13365631-13365377 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 65-533
Cow position: chr21:44672041-44671555 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 66

Conread position: 71-272
Cow position: chr21:1264719-1264521 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 72-334
Cow position: chr21:36795883-36795641 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 78-337
Cow position: chr21:29014284-29014524 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 127, 53

Conread position: 100-333
Cow position: chr21:30980310-30980538 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 30, 0

Conread position: 114-336
Cow position: chr21:33563262-33563044 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 13

Conread position: 114-341
Cow position: chr21:30119953-30119725 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 124-334
Cow position: chr21:7088845-7088638 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 68

Conread position: 130-338
Cow position: chr21:30157566-30157770 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 141-321
Cow position: chr21:5149431-5149247 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 114

Conread position: 152-337
Cow position: chr21:1591765-1591589 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 156-301
Cow position: chr21:30622853-30622710 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 157-321
Cow position: chr21:14228064-14228229 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 21

Conread position: 158-337
Cow position: chr21:45473549-45473723 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 161-337
Cow position: chr21:38449237-38449410 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 110

Conread position: 169-318
Cow position: chr21:15012641-15012493 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 169-336
Cow position: chr21:7768642-7768474 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 169-337
Cow position: chr21:29001954-29002120 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 57

Conread position: 169-338
Cow position: chr21:674875-674719 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 169-338
Cow position: chr21:29978557-29978726 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 21

Conread position: 169-407
Cow position: chr21:33982607-33982850 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 11

Conread position: 169-445
Cow position: chr21:14126479-14126206 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 149, 11

Conread position: 169-491
Cow position: chr21:26245117-26244775 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 165, 292

Conread position: 169-532
Cow position: chr21:4281676-4282065 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 57

Conread position: 170-333
Cow position: chr21:15584221-15584380 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 170-337
Cow position: chr21:8213081-8213243 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 170-338
Cow position: chr21:44592010-44592175 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 170-339
Cow position: chr21:1511492-1511326 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 9

Conread position: 170-381
Cow position: chr21:13584861-13585074 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 164, 25

Conread position: 172-338
Cow position: chr21:9990710-9990545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 147, 0

Conread position: 173-277
Cow position: chr21:29418767-29418663 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 173-336
Cow position: chr21:28907347-28907508 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 95

Conread position: 173-336
Cow position: chr21:42135417-42135579 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 151, 0

Conread position: 173-337
Cow position: chr21:20163906-20163743 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 173-337
Cow position: chr21:42007261-42007426 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 126

Conread position: 173-338
Cow position: chr21:9027514-9027348 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 43

Conread position: 173-338
Cow position: chr21:28733714-28733878 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 173-339
Cow position: chr21:10004685-10004852 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 95

Conread position: 173-340
Cow position: chr21:49699841-49700007 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 173-524
Cow position: chr21:28924309-28923937 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 222

Conread position: 173-526
Cow position: chr21:24797853-24797504 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 179, 96

Conread position: 173-533
Cow position: chr21:3585166-3585554 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 351

Conread position: 174-329
Cow position: chr21:5486313-5486471 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 174-335
Cow position: chr21:41621323-41621162 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-335
Cow position: chr21:47763920-47764080 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 174-336
Cow position: chr21:5341895-5342058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 135
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 174-336
Cow position: chr21:12801551-12801713 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 27

Conread position: 174-337
Cow position: chr21:24642710-24642556 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 174-338
Cow position: chr21:47236-47074 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 174-338
Cow position: chr21:8545825-8545984 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 174-338
Cow position: chr21:40475696-40475534 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 174-338
Cow position: chr21:42841399-42841563 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 174-339
Cow position: chr21:20318710-20318546 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 94

Conread position: 174-339
Cow position: chr21:27568974-27569136 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 96

Conread position: 174-339
Cow position: chr21:40266319-40266158 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 48

Conread position: 174-340
Cow position: chr21:41610368-41610198 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 174-366
Cow position: chr21:32297319-32297513 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 174-375
Cow position: chr21:41522217-41522421 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 144, 95

Conread position: 174-390
Cow position: chr21:46264370-46264143 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 126

Conread position: 174-527
Cow position: chr21:13164057-13163701 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 168

Conread position: 174-532
Cow position: chr21:42465989-42465632 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 161

Conread position: 174-534
Cow position: chr21:13303990-13303620 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 53

Conread position: 174-534
Cow position: chr21:37299660-37299266 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 204

Conread position: 175-331
Cow position: chr21:43259416-43259260 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 58

Conread position: 175-338
Cow position: chr21:868727-868890 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 21

Conread position: 175-338
Cow position: chr21:24266369-24266531 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 175-338
Cow position: chr21:31159594-31159436 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 175-340
Cow position: chr21:36508431-36508270 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 175-390
Cow position: chr21:27810584-27810379 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 175-400
Cow position: chr21:37344903-37345135 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 224

Conread position: 175-438
Cow position: chr21:35437292-35437562 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 58

Conread position: 176-297
Cow position: chr21:25159367-25159247 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 176-321
Cow position: chr21:4399999-4399855 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 176-336
Cow position: chr21:957866-957709 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 176-343
Cow position: chr21:46599555-46599390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 178-276
Cow position: chr21:8351099-8351197 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 178-277
Cow position: chr21:40930281-40930380 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 178-315
Cow position: chr21:39403333-39403468 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 178-317
Cow position: chr21:41450575-41450437 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 56

Conread position: 178-319
Cow position: chr21:11182745-11182606 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 178-319
Cow position: chr21:25012275-25012135 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 178-320
Cow position: chr21:40820660-40820801 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 178-325
Cow position: chr21:5464942-5464797 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 178-330
Cow position: chr21:24875547-24875394 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 178-334
Cow position: chr21:30222539-30222383 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 178-335
Cow position: chr21:829015-829171 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 40

Conread position: 178-335
Cow position: chr21:34010204-34010357 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 178-335
Cow position: chr21:41579950-41579793 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 178-336
Cow position: chr21:28600078-28599925 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 43

Conread position: 178-336
Cow position: chr21:31279450-31279292 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 178-336
Cow position: chr21:36682519-36682361 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 137
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 178-336
Cow position: chr21:47719109-47719263 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 178-337
Cow position: chr21:643518-643360 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 0

Conread position: 178-337
Cow position: chr21:4280481-4280636 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 178-337
Cow position: chr21:12461773-12461932 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 17

Conread position: 178-337
Cow position: chr21:16498710-16498554 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 178-337
Cow position: chr21:28030482-28030324 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 178-337
Cow position: chr21:41287599-41287758 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 178-337
Cow position: chr21:45920867-45921023 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 178-338
Cow position: chr21:742471-742321 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 178-338
Cow position: chr21:8349522-8349365 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 178-338
Cow position: chr21:8426639-8426481 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 178-338
Cow position: chr21:9417964-9418121 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 178-338
Cow position: chr21:11644771-11644932 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 178-338
Cow position: chr21:17252782-17252944 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 103

Conread position: 178-338
Cow position: chr21:19359982-19360142 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 178-338
Cow position: chr21:44825691-44825855 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 178-339
Cow position: chr21:641781-641620 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 134
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 178-339
Cow position: chr21:10264226-10264066 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 178-340
Cow position: chr21:48334598-48334758 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 178-376
Cow position: chr21:30250010-30250211 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 30

Conread position: 178-384
Cow position: chr21:7824995-7825200 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 116

Conread position: 178-386
Cow position: chr21:38692390-38692178 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 43

Conread position: 178-394
Cow position: chr21:10538061-10538285 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 149, 0

Conread position: 178-408
Cow position: chr21:32339546-32339782 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 222

Conread position: 178-527
Cow position: chr21:17642792-17643162 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 158, 33

Conread position: 178-530
Cow position: chr21:29485172-29484789 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 90

Conread position: 179-313
Cow position: chr21:40059223-40059087 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 179-337
Cow position: chr21:11057688-11057843 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 179-339
Cow position: chr21:28919335-28919490 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 179-340
Cow position: chr21:6051696-6051534 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 159, 0

Conread position: 179-408
Cow position: chr21:32237473-32237250 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 96

Conread position: 179-534
Cow position: chr21:44515465-44515075 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 55, 0

Conread position: 180-336
Cow position: chr21:8625365-8625214 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 180-336
Cow position: chr21:21615976-21615818 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 180-337
Cow position: chr21:9256470-9256619 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 70

Conread position: 180-337
Cow position: chr21:27863322-27863478 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 180-337
Cow position: chr21:30592117-30592269 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 180-338
Cow position: chr21:22851112-22850956 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 180-342
Cow position: chr21:7377734-7377896 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 180-390
Cow position: chr21:82259-82050 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 141, 0

Conread position: 180-534
Cow position: chr21:14760757-14760381 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 156

Conread position: 180-534
Cow position: chr21:25345053-25344679 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 40

Conread position: 181-335
Cow position: chr21:22939961-22939804 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 181-338
Cow position: chr21:6713332-6713493 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 87

Conread position: 181-338
Cow position: chr21:37706220-37706381 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 181-338
Cow position: chr21:41590374-41590531 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 181-339
Cow position: chr21:3818399-3818242 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 181-523
Cow position: chr21:33264035-33263660 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 19

Conread position: 182-325
Cow position: chr21:25014843-25014979 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 182-340
Cow position: chr21:15976822-15976662 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 62

Conread position: 182-519
Cow position: chr21:802127-802478 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 277

Conread position: 182-526
Cow position: chr21:32559175-32559545 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 257

Conread position: 183-334
Cow position: chr21:19868766-19868916 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 183-338
Cow position: chr21:33908-33753 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 183-338
Cow position: chr21:36297683-36297527 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 183-339
Cow position: chr21:19240683-19240840 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 183-376
Cow position: chr21:23321889-23322093 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 183-534
Cow position: chr21:44565533-44565901 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 143, 84

Conread position: 184-310
Cow position: chr21:30658058-30657932 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 184-336
Cow position: chr21:31691670-31691521 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 184-534
Cow position: chr21:7673308-7672934 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 17

Conread position: 185-336
Cow position: chr21:7581718-7581869 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 185-338
Cow position: chr21:11739933-11740085 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 128
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 185-340
Cow position: chr21:734776-734626 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 185-340
Cow position: chr21:30835550-30835398 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 185-390
Cow position: chr21:29069139-29069358 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 186-383
Cow position: chr21:42348510-42348696 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 187-334
Cow position: chr21:39393934-39393786 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 187-387
Cow position: chr21:22465375-22465173 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 148, 29

Conread position: 187-390
Cow position: chr21:724698-724915 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 14

Conread position: 189-335
Cow position: chr21:8125622-8125767 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 189-338
Cow position: chr21:22861182-22861036 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 189-338
Cow position: chr21:24598840-24598692 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 18

Conread position: 189-534
Cow position: chr21:34654256-34653885 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 109

Conread position: 190-305
Cow position: chr21:17790779-17790891 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 190-329
Cow position: chr21:13225897-13225758 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 190-335
Cow position: chr21:713125-712979 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 120

Conread position: 190-335
Cow position: chr21:28191214-28191071 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 0

Conread position: 190-336
Cow position: chr21:48233983-48234130 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 81

Conread position: 190-337
Cow position: chr21:28244652-28244506 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 190-338
Cow position: chr21:7169870-7169722 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 191-312
Cow position: chr21:20174499-20174378 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 191-323
Cow position: chr21:30243503-30243632 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 191-336
Cow position: chr21:16570080-16569937 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 191-338
Cow position: chr21:18800353-18800505 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 191-338
Cow position: chr21:28626418-28626276 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 191-338
Cow position: chr21:46451773-46451918 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 126
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 116, 0

Conread position: 191-339
Cow position: chr21:396048-395901 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 191-340
Cow position: chr21:44486564-44486413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 140, 0

Conread position: 191-383
Cow position: chr21:11678132-11678311 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 131, 10

Conread position: 191-408
Cow position: chr21:24858496-24858265 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 135, 229

Conread position: 191-534
Cow position: chr21:20160857-20160485 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 344

Conread position: 191-534
Cow position: chr21:38121282-38120908 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 192-314
Cow position: chr21:8506366-8506487 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 192-314
Cow position: chr21:8509254-8509375 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 192-336
Cow position: chr21:21169316-21169456 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 192-336
Cow position: chr21:25764815-25764672 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 192-339
Cow position: chr21:45262630-45262777 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 193-334
Cow position: chr21:7394110-7394248 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 193-337
Cow position: chr21:25383205-25383059 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 193-338
Cow position: chr21:41046985-41046841 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 193-408
Cow position: chr21:38900952-38900733 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 57

Conread position: 194-337
Cow position: chr21:47464941-47465083 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 194-534
Cow position: chr21:28442910-28442545 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 136, 148

Conread position: 195-334
Cow position: chr21:71763-71625 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 195-337
Cow position: chr21:27229618-27229756 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 195-337
Cow position: chr21:41974201-41974339 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 195-338
Cow position: chr21:18828126-18828268 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 195-390
Cow position: chr21:33210365-33210173 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 196-335
Cow position: chr21:471850-471713 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 196-337
Cow position: chr21:36763237-36763097 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 197-336
Cow position: chr21:42413922-42414062 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 197-407
Cow position: chr21:10561409-10561630 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 10

Conread position: 198-381
Cow position: chr21:38267888-38268065 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 198-390
Cow position: chr21:40192131-40192330 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 9

Conread position: 201-337
Cow position: chr21:22014361-22014225 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 201-338
Cow position: chr21:15911571-15911437 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 201-403
Cow position: chr21:28211362-28211155 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 133, 52

Conread position: 201-534
Cow position: chr21:5595816-5595462 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 24

Conread position: 202-332
Cow position: chr21:2679718-2679597 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 202-337
Cow position: chr21:42540050-42540187 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 202-511
Cow position: chr21:29213990-29214324 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 243

Conread position: 204-331
Cow position: chr21:31147767-31147893 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 204-336
Cow position: chr21:47363566-47363700 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 204-337
Cow position: chr21:44214294-44214162 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 204-338
Cow position: chr21:47160386-47160252 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 204-387
Cow position: chr21:35354701-35354509 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 180

Conread position: 205-338
Cow position: chr21:12207635-12207768 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-338
Cow position: chr21:6851337-6851206 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 207-534
Cow position: chr21:19258983-19258627 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 131, 71

Conread position: 210-368
Cow position: chr21:20183233-20183064 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 221-337
Cow position: chr21:12104517-12104400 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 222-339
Cow position: chr21:18842087-18842204 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 222-525
Cow position: chr21:16187657-16187989 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 153

Conread position: 227-446
Cow position: chr21:297899-297683 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 113

Conread position: 274-534
Cow position: chr21:7132379-7132661 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 12, 254

Conread position: 329-533
Cow position: chr21:16270745-16270534 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 184

Conread position: 348-534
Cow position: chr21:20262342-20262533 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 26

Conread position: 352-534
Cow position: chr21:29069341-29069528 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 14

Conread position: 376-534
Cow position: chr21:23822131-23821969 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 113

Conread position: 380-513
Cow position: chr21:35897442-35897304 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 380-530
Cow position: chr21:11645010-11645164 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 380-532
Cow position: chr21:12617097-12616942 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 380-534
Cow position: chr21:33997267-33997421 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 22

Conread position: 380-534
Cow position: chr21:48107903-48108066 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 381-533
Cow position: chr21:2367293-2367142 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 394-534
Cow position: chr21:45263082-45263220 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.