Cow genome map
| Conread name: | Pig1-93L05 | 
| Conread position: | 6-336 | 
| Cow position: | chr4:30792265-30791936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 30, 123 | 
| Conread position: | 19-339 | 
| Cow position: | chr4:9825454-9825757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 112, 31 | 
| Conread position: | 46-527 | 
| Cow position: | chr4:10472429-10471960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 76 | 
| Conread position: | 47-329 | 
| Cow position: | chr4:58305663-58305933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 48-338 | 
| Cow position: | chr4:33433003-33433293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 91, 16 | 
| Conread position: | 49-337 | 
| Cow position: | chr4:63095819-63096110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 100 | 
| Conread position: | 51-338 | 
| Cow position: | chr4:11380527-11380246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 80, 17 | 
| Conread position: | 52-336 | 
| Cow position: | chr4:65649884-65650165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 34, 53 | 
| Conread position: | 54-332 | 
| Cow position: | chr4:8947627-8947365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 77, 121 | 
| Conread position: | 54-338 | 
| Cow position: | chr4:19324225-19323937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 55-338 | 
| Cow position: | chr4:65131215-65131490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 10, 49 | 
| Conread position: | 56-299 | 
| Cow position: | chr4:53380926-53380689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 18, 74 | 
| Conread position: | 56-334 | 
| Cow position: | chr4:11496424-11496679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 56-336 | 
| Cow position: | chr4:10851218-10851484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 57-338 | 
| Cow position: | chr4:46487612-46487879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 166, 74 | 
| Conread position: | 60-337 | 
| Cow position: | chr4:15462026-15462289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 14, 73 | 
| Conread position: | 63-390 | 
| Cow position: | chr4:45644091-45644408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 5 | 
| Conread position: | 64-322 | 
| Cow position: | chr4:30169585-30169849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 108, 195 | 
| Conread position: | 65-338 | 
| Cow position: | chr4:37704490-37704231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 131, 32 | 
| Conread position: | 68-319 | 
| Cow position: | chr4:54854572-54854823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 48, 60 | 
| Conread position: | 68-320 | 
| Cow position: | chr4:32272730-32272993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 63, 214 | 
| Conread position: | 68-334 | 
| Cow position: | chr4:47349053-47348796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 69-303 | 
| Cow position: | chr4:65730542-65730774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 69-323 | 
| Cow position: | chr4:19304563-19304322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 52, 14 | 
| Conread position: | 72-523 | 
| Cow position: | chr4:21875022-21874570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 100 | 
| Conread position: | 73-338 | 
| Cow position: | chr4:58880741-58880998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 74-295 | 
| Cow position: | chr4:21532874-21533090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 57, 23 | 
| Conread position: | 80-530 | 
| Cow position: | chr4:3251332-3251802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 17 | 
| Conread position: | 82-341 | 
| Cow position: | chr4:34211374-34211128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 106-534 | 
| Cow position: | chr4:45662319-45662770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 166, 49 | 
| Conread position: | 110-316 | 
| Cow position: | chr4:65265114-65265321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 37, 24 | 
| Conread position: | 112-376 | 
| Cow position: | chr4:54524158-54524422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 213, 37 | 
| Conread position: | 113-338 | 
| Cow position: | chr4:10379298-10379073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 122, 14 | 
| Conread position: | 113-338 | 
| Cow position: | chr4:49826439-49826215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 89, 20 | 
| Conread position: | 115-338 | 
| Cow position: | chr4:19542319-19542101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 30, 167 | 
| Conread position: | 132-274 | 
| Cow position: | chr4:12269903-12270044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 132-336 | 
| Cow position: | chr4:50676003-50676205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 58, 138 | 
| Conread position: | 132-374 | 
| Cow position: | chr4:48396629-48396878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 155, 72 | 
| Conread position: | 136-338 | 
| Cow position: | chr4:17084178-17084375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 146-319 | 
| Cow position: | chr4:61346171-61346001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 30, 21 | 
| Conread position: | 149-338 | 
| Cow position: | chr4:41291804-41291988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 151-325 | 
| Cow position: | chr4:46702508-46702682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 155-336 | 
| Cow position: | chr4:51784324-51784145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 46, 23 | 
| Conread position: | 157-338 | 
| Cow position: | chr4:8892-9070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 158-517 | 
| Cow position: | chr4:49089925-49089541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 78, 34 | 
| Conread position: | 159-338 | 
| Cow position: | chr4:46591806-46591630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 159-534 | 
| Cow position: | chr4:56239718-56240115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 13 | 
| Conread position: | 162-338 | 
| Cow position: | chr4:54541499-54541675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 18, 26 | 
| Conread position: | 169-293 | 
| Cow position: | chr4:27657107-27656985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 169-325 | 
| Cow position: | chr4:46560314-46560156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 169-334 | 
| Cow position: | chr4:11194317-11194154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 169-335 | 
| Cow position: | chr4:34653740-34653903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 7, 33 | 
| Conread position: | 169-335 | 
| Cow position: | chr4:66172660-66172832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 79, 9 | 
| Conread position: | 169-337 | 
| Cow position: | chr4:65463378-65463536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 169-338 | 
| Cow position: | chr4:19582486-19582654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 169-338 | 
| Cow position: | chr4:34631031-34630861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 169-338 | 
| Cow position: | chr4:39984542-39984364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 25, 104 | 
| Conread position: | 169-338 | 
| Cow position: | chr4:51920676-51920507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 169-352 | 
| Cow position: | chr4:38350067-38350251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 67, 176 | 
| Conread position: | 169-361 | 
| Cow position: | chr4:39007635-39007451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 170, 11 | 
| Conread position: | 169-390 | 
| Cow position: | chr4:9815217-9815448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 164, 22 | 
| Conread position: | 169-408 | 
| Cow position: | chr4:52779982-52779736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 60, 23 | 
| Conread position: | 169-512 | 
| Cow position: | chr4:3268235-3268583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 202, 11 | 
| Conread position: | 170-337 | 
| Cow position: | chr4:4319020-4319188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 171-287 | 
| Cow position: | chr4:22215381-22215497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 171-383 | 
| Cow position: | chr4:36841395-36841190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 192, 45 | 
| Conread position: | 172-323 | 
| Cow position: | chr4:33838672-33838822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 19, 99 | 
| Conread position: | 172-333 | 
| Cow position: | chr4:85825-85664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 23, 142 | 
| Conread position: | 172-335 | 
| Cow position: | chr4:28771938-28772101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 172-336 | 
| Cow position: | chr4:63964864-63965023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 173-321 | 
| Cow position: | chr4:60527308-60527160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 173-325 | 
| Cow position: | chr4:47038895-47038743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 173-333 | 
| Cow position: | chr4:8182508-8182672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 173-333 | 
| Cow position: | chr4:54455214-54455374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 36, 101 | 
| Conread position: | 173-336 | 
| Cow position: | chr4:6653848-6653690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 173-337 | 
| Cow position: | chr4:23509721-23509560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 173-337 | 
| Cow position: | chr4:48104440-48104605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 173-338 | 
| Cow position: | chr4:48173264-48173099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 173-338 | 
| Cow position: | chr4:68590897-68590740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 173-339 | 
| Cow position: | chr4:570920-570754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 41, 54 | 
| Conread position: | 173-340 | 
| Cow position: | chr4:12127513-12127677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 23, 16 | 
| Conread position: | 173-340 | 
| Cow position: | chr4:38935487-38935320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 30, 16 | 
| Conread position: | 173-340 | 
| Cow position: | chr4:54191217-54191051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 173-370 | 
| Cow position: | chr4:59002012-59002214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 157, 94 | 
| Conread position: | 173-378 | 
| Cow position: | chr4:23600295-23600089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 173-387 | 
| Cow position: | chr4:17186223-17186448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 160, 105 | 
| Conread position: | 173-527 | 
| Cow position: | chr4:58248529-58248145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 157, 103 | 
| Conread position: | 173-532 | 
| Cow position: | chr4:46476818-46477207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 173-534 | 
| Cow position: | chr4:22546713-22547069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 21, 64 | 
| Conread position: | 174-276 | 
| Cow position: | chr4:19420630-19420732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-302 | 
| Cow position: | chr4:61887763-61887635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-325 | 
| Cow position: | chr4:19539110-19539261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-329 | 
| Cow position: | chr4:60442916-60443068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 174-331 | 
| Cow position: | chr4:63117514-63117669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 24, 118 | 
| Conread position: | 174-333 | 
| Cow position: | chr4:12442023-12441863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 13, 67 | 
| Conread position: | 174-333 | 
| Cow position: | chr4:13241753-13241593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 13, 67 | 
| Conread position: | 174-334 | 
| Cow position: | chr4:47280254-47280097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 174-335 | 
| Cow position: | chr4:19098599-19098435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 174-336 | 
| Cow position: | chr4:19321951-19322115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 174-336 | 
| Cow position: | chr4:23450967-23451130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 174-336 | 
| Cow position: | chr4:44782501-44782340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 174-336 | 
| Cow position: | chr4:45636293-45636131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:3341080-3340916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:19097414-19097252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 28, 16 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:19431570-19431732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:25537673-25537511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 89, 28 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:37313294-37313134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 20, 106 | 
| Conread position: | 174-337 | 
| Cow position: | chr4:45563873-45563706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 149 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:1998-1834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:12901431-12901595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:34641600-34641763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:36893487-36893322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:49800817-49800657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:59378036-59377872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 174-338 | 
| Cow position: | chr4:60719229-60719064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 174-339 | 
| Cow position: | chr4:20142785-20142944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 174-339 | 
| Cow position: | chr4:45582996-45583157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 174-339 | 
| Cow position: | chr4:45775209-45775376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 174-340 | 
| Cow position: | chr4:13973843-13974012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 174-374 | 
| Cow position: | chr4:61757790-61757596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 14, 73 | 
| Conread position: | 174-403 | 
| Cow position: | chr4:19500966-19501201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 157, 11 | 
| Conread position: | 174-505 | 
| Cow position: | chr4:22725218-22724882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 9, 84 | 
| Conread position: | 174-515 | 
| Cow position: | chr4:7808700-7808327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 29, 125 | 
| Conread position: | 174-531 | 
| Cow position: | chr4:65919735-65919351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 164, 103 | 
| Conread position: | 174-532 | 
| Cow position: | chr4:508781-509166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 27, 271 | 
| Conread position: | 175-297 | 
| Cow position: | chr4:46761733-46761611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 175-297 | 
| Cow position: | chr4:53833291-53833162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 175-333 | 
| Cow position: | chr4:46404780-46404936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 16, 80 | 
| Conread position: | 175-336 | 
| Cow position: | chr4:2602356-2602200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 175-336 | 
| Cow position: | chr4:60506399-60506241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 21, 98 | 
| Conread position: | 175-337 | 
| Cow position: | chr4:10915711-10915877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 110, 43 | 
| Conread position: | 175-337 | 
| Cow position: | chr4:59277354-59277515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 175-338 | 
| Cow position: | chr4:12591088-12591251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 175-338 | 
| Cow position: | chr4:34022459-34022622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 175-338 | 
| Cow position: | chr4:65753124-65753288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 175-340 | 
| Cow position: | chr4:35638775-35638941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 10, 161 | 
| Conread position: | 175-390 | 
| Cow position: | chr4:12903946-12903718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 132, 26 | 
| Conread position: | 175-416 | 
| Cow position: | chr4:69169771-69169526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 162, 152 | 
| Conread position: | 175-534 | 
| Cow position: | chr4:48152251-48152639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 25 | 
| Conread position: | 176-316 | 
| Cow position: | chr4:19496619-19496479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 176-316 | 
| Cow position: | chr4:29317951-29318091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 176-321 | 
| Cow position: | chr4:43916415-43916268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 176-337 | 
| Cow position: | chr4:1419351-1419188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 63, 110 | 
| Conread position: | 176-390 | 
| Cow position: | chr4:19407873-19408098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 150, 75 | 
| Conread position: | 177-293 | 
| Cow position: | chr4:50494895-50494779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 177-338 | 
| Cow position: | chr4:19102758-19102919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 155, 136 | 
| Conread position: | 177-338 | 
| Cow position: | chr4:21161229-21161066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 148, 0 | 
| Conread position: | 177-338 | 
| Cow position: | chr4:34562505-34562345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 97, 115 | 
| Conread position: | 178-272 | 
| Cow position: | chr4:28570220-28570126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 95 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-277 | 
| Cow position: | chr4:54785806-54785905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-290 | 
| Cow position: | chr4:28854152-28854265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 178-299 | 
| Cow position: | chr4:19122995-19122874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-299 | 
| Cow position: | chr4:51083216-51083336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 178-306 | 
| Cow position: | chr4:18576412-18576539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 178-308 | 
| Cow position: | chr4:54650361-54650492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 178-310 | 
| Cow position: | chr4:32353325-32353457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-311 | 
| Cow position: | chr4:17790169-17790302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-323 | 
| Cow position: | chr4:18098938-18099084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 178-331 | 
| Cow position: | chr4:34503419-34503262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 178-331 | 
| Cow position: | chr4:44903416-44903264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 24, 91 | 
| Conread position: | 178-331 | 
| Cow position: | chr4:65173225-65173072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-334 | 
| Cow position: | chr4:7571535-7571379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 18, 39 | 
| Conread position: | 178-334 | 
| Cow position: | chr4:62472202-62472046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-335 | 
| Cow position: | chr4:17051164-17051321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 104, 29 | 
| Conread position: | 178-335 | 
| Cow position: | chr4:32693911-32693753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 178-335 | 
| Cow position: | chr4:44772920-44773077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-335 | 
| Cow position: | chr4:46435447-46435290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-335 | 
| Cow position: | chr4:46550507-46550346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:19119142-19118982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:27276421-27276577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:33181667-33181509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:37915213-37915370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:38944135-38944291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 178-336 | 
| Cow position: | chr4:42231901-42232058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 178-337 | 
| Cow position: | chr4:19256816-19256659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 178-337 | 
| Cow position: | chr4:35982121-35981960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 91, 53 | 
| Conread position: | 178-337 | 
| Cow position: | chr4:54920967-54921123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 36, 101 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:10732345-10732186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:12135804-12135964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 132, 17 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:13344661-13344501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:20026980-20027140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 23, 44 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:22138098-22138259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:37732360-37732520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:48961363-48961522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:51851335-51851169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 178-338 | 
| Cow position: | chr4:54927317-54927477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-339 | 
| Cow position: | chr4:21531521-21531681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 178-339 | 
| Cow position: | chr4:27699154-27698991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 145, 124 | 
| Conread position: | 178-339 | 
| Cow position: | chr4:38209852-38210013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 178-339 | 
| Cow position: | chr4:48381501-48381343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 178-339 | 
| Cow position: | chr4:66547646-66547806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 178-340 | 
| Cow position: | chr4:20147310-20147143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 178-340 | 
| Cow position: | chr4:46136874-46136711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 13, 38 | 
| Conread position: | 178-347 | 
| Cow position: | chr4:44854168-44854334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 178-369 | 
| Cow position: | chr4:37991714-37991518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 18, 93 | 
| Conread position: | 178-378 | 
| Cow position: | chr4:19333509-19333307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 178-381 | 
| Cow position: | chr4:19578510-19578306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 77, 115 | 
| Conread position: | 178-383 | 
| Cow position: | chr4:36290747-36290535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 178-390 | 
| Cow position: | chr4:16814505-16814292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 178-400 | 
| Cow position: | chr4:27530241-27530008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 226 | 
| Conread position: | 178-408 | 
| Cow position: | chr4:33091496-33091264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 153, 211 | 
| Conread position: | 178-409 | 
| Cow position: | chr4:23846929-23847167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 147, 36 | 
| Conread position: | 178-502 | 
| Cow position: | chr4:13872027-13871691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 261 | 
| Conread position: | 178-522 | 
| Cow position: | chr4:47730987-47730604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 178-526 | 
| Cow position: | chr4:46455946-46456309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 156, 100 | 
| Conread position: | 178-527 | 
| Cow position: | chr4:14504919-14505263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 22 | 
| Conread position: | 178-532 | 
| Cow position: | chr4:69305751-69305388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 71, 191 | 
| Conread position: | 178-534 | 
| Cow position: | chr4:3421749-3421376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 24, 198 | 
| Conread position: | 178-534 | 
| Cow position: | chr4:42423682-42424071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 361 | 
| Conread position: | 178-534 | 
| Cow position: | chr4:44838772-44839155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 159, 38 | 
| Conread position: | 179-309 | 
| Cow position: | chr4:56395634-56395504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 179-314 | 
| Cow position: | chr4:13995506-13995374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 24, 38 | 
| Conread position: | 179-325 | 
| Cow position: | chr4:19456565-19456711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 179-334 | 
| Cow position: | chr4:18952095-18951940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 179-334 | 
| Cow position: | chr4:31136876-31136723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 179-338 | 
| Cow position: | chr4:36744700-36744543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 76, 83 | 
| Conread position: | 179-339 | 
| Cow position: | chr4:65950776-65950617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 179-340 | 
| Cow position: | chr4:4084989-4085159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 179-376 | 
| Cow position: | chr4:11871796-11871994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 23, 174 | 
| Conread position: | 179-390 | 
| Cow position: | chr4:51769224-51769011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 143, 25 | 
| Conread position: | 179-394 | 
| Cow position: | chr4:29384113-29384326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 155, 95 | 
| Conread position: | 179-534 | 
| Cow position: | chr4:25354650-25354284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 17, 218 | 
| Conread position: | 180-299 | 
| Cow position: | chr4:62794243-62794361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 180-303 | 
| Cow position: | chr4:59015707-59015590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 180-317 | 
| Cow position: | chr4:61268311-61268175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 180-325 | 
| Cow position: | chr4:34983378-34983520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 180-336 | 
| Cow position: | chr4:46566345-46566506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 180-338 | 
| Cow position: | chr4:10558662-10558497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 180-338 | 
| Cow position: | chr4:17851132-17851290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 180-338 | 
| Cow position: | chr4:33970779-33970939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 112, 15 | 
| Conread position: | 180-338 | 
| Cow position: | chr4:48422995-48422840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 180-339 | 
| Cow position: | chr4:19435376-19435218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 180-340 | 
| Cow position: | chr4:45626507-45626666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 180-347 | 
| Cow position: | chr4:68387913-68387748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 111, 0 | 
| Conread position: | 180-367 | 
| Cow position: | chr4:26901448-26901269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 180-400 | 
| Cow position: | chr4:46025-45811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 180-524 | 
| Cow position: | chr4:53126231-53125879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 147, 21 | 
| Conread position: | 180-527 | 
| Cow position: | chr4:33096862-33097225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 139, 15 | 
| Conread position: | 181-289 | 
| Cow position: | chr4:5047026-5047134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 181-308 | 
| Cow position: | chr4:561751-561625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 22, 31 | 
| Conread position: | 181-315 | 
| Cow position: | chr4:41907462-41907596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 181-334 | 
| Cow position: | chr4:1026115-1026267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 25, 99 | 
| Conread position: | 181-334 | 
| Cow position: | chr4:14153227-14153062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 181-336 | 
| Cow position: | chr4:26659420-26659265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 68, 136 | 
| Conread position: | 181-336 | 
| Cow position: | chr4:69290623-69290778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 181-337 | 
| Cow position: | chr4:45706158-45706007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 181-338 | 
| Cow position: | chr4:16762606-16762765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 181-338 | 
| Cow position: | chr4:52831895-52832053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 109 | 
| Conread position: | 182-336 | 
| Cow position: | chr4:5727956-5727809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 74, 13 | 
| Conread position: | 182-338 | 
| Cow position: | chr4:40414509-40414665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 182-342 | 
| Cow position: | chr4:7698384-7698224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 152, 77 | 
| Conread position: | 182-382 | 
| Cow position: | chr4:54478803-54478999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 86 | 
| Conread position: | 182-390 | 
| Cow position: | chr4:28839735-28839526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 134, 19 | 
| Conread position: | 182-534 | 
| Cow position: | chr4:53134722-53134341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 183-291 | 
| Cow position: | chr4:479674-479782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 183-298 | 
| Cow position: | chr4:33870192-33870077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 29, 20 | 
| Conread position: | 183-326 | 
| Cow position: | chr4:21506840-21506981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 183-336 | 
| Cow position: | chr4:39128655-39128507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 183-338 | 
| Cow position: | chr4:21391694-21391848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 183-338 | 
| Cow position: | chr4:61235088-61235239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 183-387 | 
| Cow position: | chr4:19700213-19700011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 91 | 
| Conread position: | 183-390 | 
| Cow position: | chr4:12004332-12004125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 154, 96 | 
| Conread position: | 183-533 | 
| Cow position: | chr4:61391109-61391470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 136, 203 | 
| Conread position: | 183-534 | 
| Cow position: | chr4:3688047-3687658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 17, 185 | 
| Conread position: | 184-293 | 
| Cow position: | chr4:3519538-3519429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 184-300 | 
| Cow position: | chr4:51708182-51708066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 184-304 | 
| Cow position: | chr4:32601951-32601834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 184-336 | 
| Cow position: | chr4:25888718-25888866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 184-337 | 
| Cow position: | chr4:60302890-60303051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 184-338 | 
| Cow position: | chr4:53346448-53346289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 184-338 | 
| Cow position: | chr4:68234089-68233930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 184-340 | 
| Cow position: | chr4:51728197-51728038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 184-400 | 
| Cow position: | chr4:25879507-25879289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 139, 87 | 
| Conread position: | 184-532 | 
| Cow position: | chr4:23646747-23647111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 106, 11 | 
| Conread position: | 185-305 | 
| Cow position: | chr4:2593960-2593844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 185-339 | 
| Cow position: | chr4:68456804-68456957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 27, 72 | 
| Conread position: | 185-340 | 
| Cow position: | chr4:61313097-61313252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 185-390 | 
| Cow position: | chr4:42921746-42921951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 151, 10 | 
| Conread position: | 186-534 | 
| Cow position: | chr4:37935169-37935551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 187-338 | 
| Cow position: | chr4:19292835-19292684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 25, 35 | 
| Conread position: | 187-522 | 
| Cow position: | chr4:49794774-49794421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 7, 93 | 
| Conread position: | 188-400 | 
| Cow position: | chr4:29291627-29291410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 137, 103 | 
| Conread position: | 189-310 | 
| Cow position: | chr4:32789893-32790012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 189-335 | 
| Cow position: | chr4:17774238-17774384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 189-336 | 
| Cow position: | chr4:60141410-60141552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 189-338 | 
| Cow position: | chr4:22196104-22196248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 190-308 | 
| Cow position: | chr4:42374044-42374164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 190-339 | 
| Cow position: | chr4:1645982-1646130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 190-341 | 
| Cow position: | chr4:67393202-67393050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 190-376 | 
| Cow position: | chr4:11969566-11969376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 11, 81 | 
| Conread position: | 191-314 | 
| Cow position: | chr4:8083688-8083812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 191-316 | 
| Cow position: | chr4:45738365-45738490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 191-335 | 
| Cow position: | chr4:16221767-16221911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 191-335 | 
| Cow position: | chr4:29805264-29805404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 191-335 | 
| Cow position: | chr4:45862522-45862383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 191-336 | 
| Cow position: | chr4:386286-386427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 191-337 | 
| Cow position: | chr4:19199177-19199323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 191-338 | 
| Cow position: | chr4:34509950-34509803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 191-382 | 
| Cow position: | chr4:65175035-65175234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 149, 185 | 
| Conread position: | 191-387 | 
| Cow position: | chr4:61066875-61066677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 88, 141 | 
| Conread position: | 191-407 | 
| Cow position: | chr4:63349381-63349590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 143, 30 | 
| Conread position: | 191-408 | 
| Cow position: | chr4:2099740-2099521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 64, 164 | 
| Conread position: | 191-408 | 
| Cow position: | chr4:53208403-53208178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 145, 211 | 
| Conread position: | 191-532 | 
| Cow position: | chr4:63262096-63262441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 184, 138 | 
| Conread position: | 192-337 | 
| Cow position: | chr4:13941565-13941424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 192-337 | 
| Cow position: | chr4:38156979-38157124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 192-338 | 
| Cow position: | chr4:61704756-61704899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 48, 92 | 
| Conread position: | 192-339 | 
| Cow position: | chr4:48486105-48485956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 192-340 | 
| Cow position: | chr4:5963881-5964031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 100, 21 | 
| Conread position: | 192-358 | 
| Cow position: | chr4:56336774-56336610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 192-390 | 
| Cow position: | chr4:24810342-24810541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 32, 76 | 
| Conread position: | 192-407 | 
| Cow position: | chr4:19597215-19597431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 146, 188 | 
| Conread position: | 192-408 | 
| Cow position: | chr4:32726333-32726110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 133, 209 | 
| Conread position: | 192-530 | 
| Cow position: | chr4:21874284-21873934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 206 | 
| Conread position: | 192-532 | 
| Cow position: | chr4:23656079-23655726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 144, 77 | 
| Conread position: | 192-534 | 
| Cow position: | chr4:53100910-53100536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 341 | 
| Conread position: | 193-338 | 
| Cow position: | chr4:24001860-24002001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 194-337 | 
| Cow position: | chr4:55395868-55395727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 194-340 | 
| Cow position: | chr4:28701465-28701320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 194-383 | 
| Cow position: | chr4:49158688-49158877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 98, 67 | 
| Conread position: | 195-325 | 
| Cow position: | chr4:4295691-4295562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 195-331 | 
| Cow position: | chr4:34337167-34337299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 195-336 | 
| Cow position: | chr4:20327603-20327744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 68, 111 | 
| Conread position: | 195-337 | 
| Cow position: | chr4:66136502-66136641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 195-338 | 
| Cow position: | chr4:34369344-34369487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 195-341 | 
| Cow position: | chr4:64040221-64040077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 131, 103 | 
| Conread position: | 195-381 | 
| Cow position: | chr4:45685563-45685374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 195-386 | 
| Cow position: | chr4:63459117-63459308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 117, 134 | 
| Conread position: | 195-534 | 
| Cow position: | chr4:3850657-3850283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 132, 346 | 
| Conread position: | 196-336 | 
| Cow position: | chr4:4084345-4084485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 196-339 | 
| Cow position: | chr4:5460757-5460899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 196-408 | 
| Cow position: | chr4:21017-20803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 138, 194 | 
| Conread position: | 196-408 | 
| Cow position: | chr4:36731295-36731078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 130, 188 | 
| Conread position: | 197-333 | 
| Cow position: | chr4:22009954-22010087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 200-337 | 
| Cow position: | chr4:3283346-3283483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 200-338 | 
| Cow position: | chr4:68889460-68889598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 200-422 | 
| Cow position: | chr4:44449408-44449631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 118, 74 | 
| Conread position: | 200-532 | 
| Cow position: | chr4:38952654-38952291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 132, 338 | 
| Conread position: | 201-325 | 
| Cow position: | chr4:60363448-60363326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 201-336 | 
| Cow position: | chr4:36517383-36517514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 201-338 | 
| Cow position: | chr4:26012500-26012360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 101, 47 | 
| Conread position: | 201-338 | 
| Cow position: | chr4:26830806-26830666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 101, 47 | 
| Conread position: | 201-361 | 
| Cow position: | chr4:20504987-20505153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 96, 15 | 
| Conread position: | 201-399 | 
| Cow position: | chr4:48409169-48409379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 125, 100 | 
| Conread position: | 201-407 | 
| Cow position: | chr4:54111841-54111632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 88, 30 | 
| Conread position: | 201-407 | 
| Cow position: | chr4:61897435-61897653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 201-534 | 
| Cow position: | chr4:8413023-8413380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 114 | 
| Conread position: | 202-338 | 
| Cow position: | chr4:42176375-42176511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 204-390 | 
| Cow position: | chr4:12049343-12049145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 122, 69 | 
| Conread position: | 204-489 | 
| Cow position: | chr4:39609814-39609539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 126, 39 | 
| Conread position: | 204-515 | 
| Cow position: | chr4:25984317-25983976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 43, 142 | 
| Conread position: | 204-534 | 
| Cow position: | chr4:65179050-65179401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 274 | 
| Conread position: | 206-339 | 
| Cow position: | chr4:61478700-61478567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 206-382 | 
| Cow position: | chr4:68806106-68805934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 207-506 | 
| Cow position: | chr4:13142473-13142774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 132, 44 | 
| Conread position: | 208-334 | 
| Cow position: | chr4:13990866-13990988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 209-338 | 
| Cow position: | chr4:13693580-13693709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 211-338 | 
| Cow position: | chr4:21257034-21257162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-390 | 
| Cow position: | chr4:16601973-16602153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 109, 67 | 
| Conread position: | 213-337 | 
| Cow position: | chr4:20139429-20139551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 216-337 | 
| Cow position: | chr4:16799101-16799222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 221-340 | 
| Cow position: | chr4:620055-620171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 221-383 | 
| Cow position: | chr4:51730030-51729859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 7, 16 | 
| Conread position: | 222-390 | 
| Cow position: | chr4:21232795-21232974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 222-390 | 
| Cow position: | chr4:25356241-25356407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 225-534 | 
| Cow position: | chr4:23854256-23853934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 96 | 
| Conread position: | 226-534 | 
| Cow position: | chr4:21065111-21064769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 92, 314 | 
| Conread position: | 228-334 | 
| Cow position: | chr4:67466795-67466689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 228-336 | 
| Cow position: | chr4:19493628-19493520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 229-534 | 
| Cow position: | chr4:19256356-19256051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 107, 68 | 
| Conread position: | 234-337 | 
| Cow position: | chr4:24744339-24744442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 234-527 | 
| Cow position: | chr4:13771334-13771617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 275, 111 | 
| Conread position: | 249-534 | 
| Cow position: | chr4:19142328-19142019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 82, 101 | 
| Conread position: | 271-526 | 
| Cow position: | chr4:59105795-59106073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 351-534 | 
| Cow position: | chr4:2141663-2141476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 23, 19 | 
| Conread position: | 353-534 | 
| Cow position: | chr4:21391897-21392074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 380-534 | 
| Cow position: | chr4:10412266-10412109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 35, 15 | 
| Conread position: | 382-534 | 
| Cow position: | chr4:19097176-19097022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 33, 126 | 
| Conread position: | 382-534 | 
| Cow position: | chr4:52748571-52748728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 393-534 | 
| Cow position: | chr4:46275067-46274923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 414-530 | 
| Cow position: | chr4:66172948-66173063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 415-533 | 
| Cow position: | chr4:37704113-37703997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 424-532 | 
| Cow position: | chr4:26163130-26163238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
