Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig1-94N05
        

               Conread position:
               159-414
               

               Cow position:
               chr13:19177876-19178141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 196
               

               Conread position:
               177-407
               

               Cow position:
               chr13:3149706-3149475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               177-457
               

               Cow position:
               chr13:49823751-49824029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 232
               

               Conread position:
               184-484
               

               Cow position:
               chr13:7149765-7149473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               190-494
               

               Cow position:
               chr13:52934165-52934466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               204-494
               

               Cow position:
               chr13:311190-311480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               206-397
               

               Cow position:
               chr13:4965155-4965336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               208-355
               

               Cow position:
               chr13:19182913-19182766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               209-338
               

               Cow position:
               chr13:7114386-7114258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               211-442
               

               Cow position:
               chr13:20579679-20579900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               212-447
               

               Cow position:
               chr13:54627244-54627485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               213-407
               

               Cow position:
               chr13:1339382-1339185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               213-494
               

               Cow position:
               chr13:24585812-24586093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               215-415
               

               Cow position:
               chr13:55143041-55143237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               215-494
               

               Cow position:
               chr13:20271464-20271177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               216-442
               

               Cow position:
               chr13:18166500-18166724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               203, 25
               

               Conread position:
               216-494
               

               Cow position:
               chr13:25817298-25817578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 22
               

               Conread position:
               219-414
               

               Cow position:
               chr13:10711641-10711452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               219-493
               

               Cow position:
               chr13:34263599-34263320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 29
               

               Conread position:
               219-494
               

               Cow position:
               chr13:29831654-29831387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               200, 8
               

               Conread position:
               220-407
               

               Cow position:
               chr13:14351349-14351538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               220-490
               

               Cow position:
               chr13:23961036-23960767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               98, 48
               

               Conread position:
               221-494
               

               Cow position:
               chr13:8374987-8374722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               195, 19
               

               Conread position:
               222-396
               

               Cow position:
               chr13:56432044-56431880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               222-414
               

               Cow position:
               chr13:27028132-27027935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 136
               

               Conread position:
               222-440
               

               Cow position:
               chr13:52055821-52055602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               222-442
               

               Cow position:
               chr13:25926561-25926782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               118, 124
               

               Conread position:
               223-407
               

               Cow position:
               chr13:43576785-43576970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               223-417
               

               Cow position:
               chr13:16476627-16476823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               86, 100
               

               Conread position:
               223-430
               

               Cow position:
               chr13:31507674-31507464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               223-442
               

               Cow position:
               chr13:37751296-37751075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               80, 198
               

               Conread position:
               223-442
               

               Cow position:
               chr13:52536345-52536557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               174, 72
               

               Conread position:
               224-342
               

               Cow position:
               chr13:27837717-27837600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               224-431
               

               Cow position:
               chr13:21277685-21277486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               224-490
               

               Cow position:
               chr13:14063746-14063473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 96
               

               Conread position:
               224-492
               

               Cow position:
               chr13:47007936-47007679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               225-379
               

               Cow position:
               chr13:28347859-28348011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               225-382
               

               Cow position:
               chr13:45142160-45141991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               225-387
               

               Cow position:
               chr13:29507386-29507553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 125
               

               Conread position:
               225-392
               

               Cow position:
               chr13:17787852-17787682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 123
               

               Conread position:
               225-409
               

               Cow position:
               chr13:8236680-8236873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               225-410
               

               Cow position:
               chr13:5930535-5930349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               225-414
               

               Cow position:
               chr13:3775907-3775718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 81
               

               Conread position:
               225-414
               

               Cow position:
               chr13:59461023-59461207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               225-442
               

               Cow position:
               chr13:21902181-21902384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               187, 16
               

               Conread position:
               225-464
               

               Cow position:
               chr13:7046658-7046885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               171, 15
               

               Conread position:
               225-467
               

               Cow position:
               chr13:56686219-56686447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               188, 37
               

               Conread position:
               225-494
               

               Cow position:
               chr13:2773892-2774177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               225-494
               

               Cow position:
               chr13:13320572-13320844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               225-496
               

               Cow position:
               chr13:51528662-51528391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               226-380
               

               Cow position:
               chr13:3003263-3003404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               226-393
               

               Cow position:
               chr13:14782125-14782284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               226-399
               

               Cow position:
               chr13:714687-714511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               226-494
               

               Cow position:
               chr13:34261012-34261280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 89
               

               Conread position:
               227-316
               

               Cow position:
               chr13:8354956-8355045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               227-319
               

               Cow position:
               chr13:20684373-20684281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               227-364
               

               Cow position:
               chr13:53138218-53138347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               227-385
               

               Cow position:
               chr13:15868887-15869048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               227-389
               

               Cow position:
               chr13:5873650-5873493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               227-389
               

               Cow position:
               chr13:7097362-7097524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               227-389
               

               Cow position:
               chr13:20854683-20854518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               227-390
               

               Cow position:
               chr13:32914483-32914317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               227-390
               

               Cow position:
               chr13:57929785-57929631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               227-396
               

               Cow position:
               chr13:9108893-9108730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               227-397
               

               Cow position:
               chr13:26377643-26377470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 120
               

               Conread position:
               227-399
               

               Cow position:
               chr13:6951358-6951527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               227-399
               

               Cow position:
               chr13:43342345-43342516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               227-406
               

               Cow position:
               chr13:21127563-21127382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               227-410
               

               Cow position:
               chr13:14543913-14544094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               227-414
               

               Cow position:
               chr13:11942396-11942216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               227-414
               

               Cow position:
               chr13:18970761-18970939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               227-416
               

               Cow position:
               chr13:28500289-28500099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 79
               

               Conread position:
               227-416
               

               Cow position:
               chr13:60509347-60509155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               227-417
               

               Cow position:
               chr13:10986730-10986536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               86, 191
               

               Conread position:
               227-417
               

               Cow position:
               chr13:22122487-22122678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               227-417
               

               Cow position:
               chr13:24160227-24160418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               227-417
               

               Cow position:
               chr13:27550513-27550705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               227-423
               

               Cow position:
               chr13:13797039-13796838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               86, 123
               

               Conread position:
               227-424
               

               Cow position:
               chr13:6113754-6113552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               227-424
               

               Cow position:
               chr13:20137591-20137794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               227-430
               

               Cow position:
               chr13:34533153-34532952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               227-430
               

               Cow position:
               chr13:51249599-51249400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               227-431
               

               Cow position:
               chr13:13283116-13283328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               227-431
               

               Cow position:
               chr13:22601908-22601714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               227-440
               

               Cow position:
               chr13:9707969-9707759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               227-442
               

               Cow position:
               chr13:21981192-21980984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               227-442
               

               Cow position:
               chr13:28071656-28071865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               227-442
               

               Cow position:
               chr13:37985970-37985752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 121
               

               Conread position:
               227-442
               

               Cow position:
               chr13:40490997-40491207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               227-442
               

               Cow position:
               chr13:47676159-47675943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               86, 98
               

               Conread position:
               227-461
               

               Cow position:
               chr13:45593701-45593928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               130, 90
               

               Conread position:
               227-469
               

               Cow position:
               chr13:26726832-26726584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               227-471
               

               Cow position:
               chr13:51695747-51695987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               227-490
               

               Cow position:
               chr13:11201813-11202076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 197
               

               Conread position:
               227-490
               

               Cow position:
               chr13:38873183-38872906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 196
               

               Conread position:
               227-492
               

               Cow position:
               chr13:11808359-11808611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               192, 43
               

               Conread position:
               227-493
               

               Cow position:
               chr13:13260769-13261053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               227-493
               

               Cow position:
               chr13:21170306-21170578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               185, 87
               

               Conread position:
               227-493
               

               Cow position:
               chr13:22085953-22085695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               192, 17
               

               Conread position:
               227-494
               

               Cow position:
               chr13:620470-620203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               83, 128
               

               Conread position:
               227-494
               

               Cow position:
               chr13:10220735-10221001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               85, 194
               

               Conread position:
               227-494
               

               Cow position:
               chr13:13471642-13471363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               102, 122
               

               Conread position:
               227-494
               

               Cow position:
               chr13:14940577-14940852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               227-494
               

               Cow position:
               chr13:15194944-15194682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               227-494
               

               Cow position:
               chr13:17569319-17569050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               216, 45
               

               Conread position:
               227-494
               

               Cow position:
               chr13:18994899-18995176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               227-494
               

               Cow position:
               chr13:19427412-19427690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               227-494
               

               Cow position:
               chr13:21275634-21275907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               227-494
               

               Cow position:
               chr13:23512156-23512416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               227-494
               

               Cow position:
               chr13:24753671-24753932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               192, 88
               

               Conread position:
               227-494
               

               Cow position:
               chr13:25495787-25496055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               227-494
               

               Cow position:
               chr13:25504313-25504583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               227-494
               

               Cow position:
               chr13:35659532-35659803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               227-494
               

               Cow position:
               chr13:37069115-37069399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 140
               

               Conread position:
               227-494
               

               Cow position:
               chr13:47964408-47964145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               227-494
               

               Cow position:
               chr13:57002497-57002777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               227-494
               

               Cow position:
               chr13:59170422-59170701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               81, 142
               

               Conread position:
               228-333
               

               Cow position:
               chr13:21182914-21182811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               228-355
               

               Cow position:
               chr13:43577767-43577895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               228-378
               

               Cow position:
               chr13:16278039-16278197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               228-379
               

               Cow position:
               chr13:2192517-2192659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               228-385
               

               Cow position:
               chr13:3388013-3387854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               228-399
               

               Cow position:
               chr13:9327314-9327139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               228-399
               

               Cow position:
               chr13:38683245-38683068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               228-409
               

               Cow position:
               chr13:58662020-58662210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               228-410
               

               Cow position:
               chr13:17619659-17619851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               228-414
               

               Cow position:
               chr13:13265343-13265524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               228-494
               

               Cow position:
               chr13:18851866-18852130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               228-494
               

               Cow position:
               chr13:20821059-20820786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               228-494
               

               Cow position:
               chr13:24715028-24715293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               183, 82
               

               Conread position:
               228-494
               

               Cow position:
               chr13:34281461-34281726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               191, 13
               

               Conread position:
               228-495
               

               Cow position:
               chr13:46515839-46516111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               229-381
               

               Cow position:
               chr13:26097963-26098111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               229-400
               

               Cow position:
               chr13:19588648-19588821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 134
               

               Conread position:
               229-414
               

               Cow position:
               chr13:28376782-28376597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 96
               

               Conread position:
               229-442
               

               Cow position:
               chr13:37775426-37775215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 62
               

               Conread position:
               229-489
               

               Cow position:
               chr13:20217618-20217350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 85
               

               Conread position:
               229-493
               

               Cow position:
               chr13:11060754-11061031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               229-494
               

               Cow position:
               chr13:38329398-38329676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               190, 79
               

               Conread position:
               230-313
               

               Cow position:
               chr13:48037132-48037215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               230-354
               

               Cow position:
               chr13:20654081-20653953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               230-355
               

               Cow position:
               chr13:4037703-4037824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               230-370
               

               Cow position:
               chr13:15104794-15104938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               230-372
               

               Cow position:
               chr13:8779037-8779179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 78
               

               Conread position:
               230-378
               

               Cow position:
               chr13:9702237-9702387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               230-382
               

               Cow position:
               chr13:242413-242566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               230-383
               

               Cow position:
               chr13:6996935-6997085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               127, 93
               

               Conread position:
               230-387
               

               Cow position:
               chr13:20789738-20789581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 126
               

               Conread position:
               230-388
               

               Cow position:
               chr13:38395935-38396094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               79, 93
               

               Conread position:
               230-392
               

               Cow position:
               chr13:53847338-53847180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-393
               

               Cow position:
               chr13:21886900-21886735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               230-397
               

               Cow position:
               chr13:5659984-5659821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               111, 78
               

               Conread position:
               230-397
               

               Cow position:
               chr13:9551144-9551307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-397
               

               Cow position:
               chr13:10423302-10423467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               230-397
               

               Cow position:
               chr13:22729625-22729456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               230-397
               

               Cow position:
               chr13:28605614-28605445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               230-397
               

               Cow position:
               chr13:51198590-51198757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 122
               

               Conread position:
               230-398
               

               Cow position:
               chr13:1347387-1347219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               230-399
               

               Cow position:
               chr13:585093-584922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               230-399
               

               Cow position:
               chr13:5175380-5175545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               230-399
               

               Cow position:
               chr13:16163369-16163530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               230-399
               

               Cow position:
               chr13:21009607-21009787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               230-399
               

               Cow position:
               chr13:27871552-27871721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               230-399
               

               Cow position:
               chr13:43811710-43811888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               230-405
               

               Cow position:
               chr13:6969784-6969598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr13:6377484-6377662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr13:20440832-20440660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               230-406
               

               Cow position:
               chr13:28536540-28536362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr13:37946605-37946434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-411
               

               Cow position:
               chr13:8367499-8367675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               230-411
               

               Cow position:
               chr13:16292318-16292501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               230-411
               

               Cow position:
               chr13:37030130-37030302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               230-414
               

               Cow position:
               chr13:50768372-50768563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               230-414
               

               Cow position:
               chr13:51077937-51078120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               80, 95
               

               Conread position:
               230-414
               

               Cow position:
               chr13:53390312-53390502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               230-414
               

               Cow position:
               chr13:62252064-62251881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               230-415
               

               Cow position:
               chr13:7038114-7038300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               230-416
               

               Cow position:
               chr13:39376299-39376486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               82, 185
               

               Conread position:
               230-417
               

               Cow position:
               chr13:6616982-6616793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               230-417
               

               Cow position:
               chr13:6848705-6848892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               230-417
               

               Cow position:
               chr13:7059239-7059428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               230-417
               

               Cow position:
               chr13:9124709-9124890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-417
               

               Cow position:
               chr13:12769142-12768953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               230-417
               

               Cow position:
               chr13:14575996-14576179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               125, 90
               

               Conread position:
               230-417
               

               Cow position:
               chr13:17837156-17836973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               230-422
               

               Cow position:
               chr13:48370519-48370328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               230-424
               

               Cow position:
               chr13:25604824-25604645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               230-424
               

               Cow position:
               chr13:50646848-50646657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               230-426
               

               Cow position:
               chr13:46350126-46349930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               230-441
               

               Cow position:
               chr13:43788067-43787846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               230-441
               

               Cow position:
               chr13:43839906-43839685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               230-442
               

               Cow position:
               chr13:6183650-6183428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               230-442
               

               Cow position:
               chr13:8450114-8450322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               189, 89
               

               Conread position:
               230-442
               

               Cow position:
               chr13:10522720-10522926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               192, 78
               

               Conread position:
               230-442
               

               Cow position:
               chr13:10925142-10924929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 125
               

               Conread position:
               230-442
               

               Cow position:
               chr13:12673507-12673303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               189, 84
               

               Conread position:
               230-442
               

               Cow position:
               chr13:12876195-12875983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               82, 129
               

               Conread position:
               230-442
               

               Cow position:
               chr13:15996817-15997026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               189, 40
               

               Conread position:
               230-442
               

               Cow position:
               chr13:30315281-30315499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 136
               

               Conread position:
               230-442
               

               Cow position:
               chr13:32017735-32017520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 117
               

               Conread position:
               230-442
               

               Cow position:
               chr13:33974527-33974725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               179, 84
               

               Conread position:
               230-442
               

               Cow position:
               chr13:48222768-48222556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               230-442
               

               Cow position:
               chr13:51940527-51940726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               189, 40
               

               Conread position:
               230-442
               

               Cow position:
               chr13:54145700-54145484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 185
               

               Conread position:
               230-442
               

               Cow position:
               chr13:57986153-57985946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               230-447
               

               Cow position:
               chr13:54236591-54236798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               230-449
               

               Cow position:
               chr13:17845265-17845489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 120
               

               Conread position:
               230-453
               

               Cow position:
               chr13:15162855-15162634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 171
               

               Conread position:
               230-465
               

               Cow position:
               chr13:37621597-37621341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               11, 189
               

               Conread position:
               230-468
               

               Cow position:
               chr13:52459692-52459463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               230-472
               

               Cow position:
               chr13:44278127-44278371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               230-480
               

               Cow position:
               chr13:38035620-38035872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               189, 84
               

               Conread position:
               230-480
               

               Cow position:
               chr13:55765395-55765148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               155, 74
               

               Conread position:
               230-485
               

               Cow position:
               chr13:20880044-20879783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               230-490
               

               Cow position:
               chr13:28552367-28552632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               80, 116
               

               Conread position:
               230-493
               

               Cow position:
               chr13:23667038-23667303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               181, 35
               

               Conread position:
               230-494
               

               Cow position:
               chr13:607482-607218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 224
               

               Conread position:
               230-494
               

               Cow position:
               chr13:972116-971843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               189, 87
               

               Conread position:
               230-494
               

               Cow position:
               chr13:3315905-3315628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 214
               

               Conread position:
               230-494
               

               Cow position:
               chr13:5911110-5910850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               230-494
               

               Cow position:
               chr13:7333231-7332950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 40
               

               Conread position:
               230-494
               

               Cow position:
               chr13:9899927-9900198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               230-494
               

               Cow position:
               chr13:11103427-11103141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-494
               

               Cow position:
               chr13:12449200-12448945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               230-494
               

               Cow position:
               chr13:14967434-14967168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 95
               

               Conread position:
               230-494
               

               Cow position:
               chr13:16020640-16020902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               189, 76
               

               Conread position:
               230-494
               

               Cow position:
               chr13:17159101-17158825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               90, 246
               

               Conread position:
               230-494
               

               Cow position:
               chr13:17823170-17822901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               230-494
               

               Cow position:
               chr13:17855148-17855423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 95
               

               Conread position:
               230-494
               

               Cow position:
               chr13:19393077-19393344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               192, 40
               

               Conread position:
               230-494
               

               Cow position:
               chr13:19610783-19610513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               186, 87
               

               Conread position:
               230-494
               

               Cow position:
               chr13:25579409-25579138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               230-494
               

               Cow position:
               chr13:27180818-27181080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               230-494
               

               Cow position:
               chr13:35526413-35526154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               230-494
               

               Cow position:
               chr13:41550023-41549737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 188
               

               Conread position:
               230-494
               

               Cow position:
               chr13:42113796-42114068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 142
               

               Conread position:
               230-494
               

               Cow position:
               chr13:42672649-42672372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               83, 131
               

               Conread position:
               230-494
               

               Cow position:
               chr13:44201790-44202050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               189, 84
               

               Conread position:
               230-494
               

               Cow position:
               chr13:49023085-49022816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               189, 75
               

               Conread position:
               230-494
               

               Cow position:
               chr13:49503757-49503481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               230-494
               

               Cow position:
               chr13:49795819-49796066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 114
               

               Conread position:
               230-494
               

               Cow position:
               chr13:62007888-62008162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               100, 88
               

               Conread position:
               230-496
               

               Cow position:
               chr13:6973943-6974212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 88
               

               Conread position:
               230-496
               

               Cow position:
               chr13:41189882-41190147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 117
               

               Conread position:
               231-316
               

               Cow position:
               chr13:11591200-11591286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               231-350
               

               Cow position:
               chr13:15529463-15529351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr13:25924446-25924291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               231-385
               

               Cow position:
               chr13:4135662-4135817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               231-385
               

               Cow position:
               chr13:17815026-17815172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               231-389
               

               Cow position:
               chr13:8682233-8682393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr13:17015339-17015187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr13:25313367-25313210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               231-398
               

               Cow position:
               chr13:17975180-17975016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               231-405
               

               Cow position:
               chr13:41979355-41979191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               231-406
               

               Cow position:
               chr13:37405497-37405666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr13:47186012-47186193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 137
               

               Conread position:
               231-414
               

               Cow position:
               chr13:25679109-25679284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-414
               

               Cow position:
               chr13:55775145-55775323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               231-417
               

               Cow position:
               chr13:43183026-43183215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               231-424
               

               Cow position:
               chr13:23975384-23975193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 128
               

               Conread position:
               231-430
               

               Cow position:
               chr13:47643831-47644040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 197
               

               Conread position:
               231-438
               

               Cow position:
               chr13:49283996-49283792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               118, 84
               

               Conread position:
               231-439
               

               Cow position:
               chr13:24094535-24094328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               231-441
               

               Cow position:
               chr13:53850602-53850815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               231-442
               

               Cow position:
               chr13:13775471-13775251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               231-442
               

               Cow position:
               chr13:17813253-17813463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               188, 60
               

               Conread position:
               231-442
               

               Cow position:
               chr13:33601447-33601240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               122, 62
               

               Conread position:
               231-443
               

               Cow position:
               chr13:9142052-9142272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 128
               

               Conread position:
               231-469
               

               Cow position:
               chr13:45439314-45439539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               188, 83
               

               Conread position:
               231-487
               

               Cow position:
               chr13:28440751-28440492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               188, 36
               

               Conread position:
               231-487
               

               Cow position:
               chr13:55494737-55494477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               188, 37
               

               Conread position:
               231-494
               

               Cow position:
               chr13:15991449-15991181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               231-494
               

               Cow position:
               chr13:17089731-17089473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               129, 53
               

               Conread position:
               231-494
               

               Cow position:
               chr13:17745040-17745295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               188, 82
               

               Conread position:
               231-494
               

               Cow position:
               chr13:18999312-18999590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               231-494
               

               Cow position:
               chr13:19883252-19882985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               188, 83
               

               Conread position:
               231-494
               

               Cow position:
               chr13:20314843-20314569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               231-494
               

               Cow position:
               chr13:41806558-41806825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 46
               

               Conread position:
               231-494
               

               Cow position:
               chr13:52881102-52880833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 186
               

               Conread position:
               231-496
               

               Cow position:
               chr13:46329821-46329552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               232-312
               

               Cow position:
               chr13:55316440-55316360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               72
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-313
               

               Cow position:
               chr13:52198888-52198968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               232-370
               

               Cow position:
               chr13:8232786-8232644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               232-396
               

               Cow position:
               chr13:23478683-23478847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-399
               

               Cow position:
               chr13:21955287-21955117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 132
               

               Conread position:
               232-399
               

               Cow position:
               chr13:30693345-30693517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               232-406
               

               Cow position:
               chr13:40154956-40154775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               232-409
               

               Cow position:
               chr13:28081499-28081680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               232-410
               

               Cow position:
               chr13:21426036-21425871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               232-413
               

               Cow position:
               chr13:16525446-16525261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               10, 148
               

               Conread position:
               232-414
               

               Cow position:
               chr13:17438079-17437893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               232-417
               

               Cow position:
               chr13:1363243-1363421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-417
               

               Cow position:
               chr13:10757923-10758094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               172, 66
               

               Conread position:
               232-417
               

               Cow position:
               chr13:18215141-18215332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               232-417
               

               Cow position:
               chr13:45499014-45499195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               125, 82
               

               Conread position:
               232-429
               

               Cow position:
               chr13:16789993-16790188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               232-430
               

               Cow position:
               chr13:3594115-3594300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               187, 91
               

               Conread position:
               232-430
               

               Cow position:
               chr13:18093086-18092895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               187, 53
               

               Conread position:
               232-430
               

               Cow position:
               chr13:21280718-21280520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               75, 115
               

               Conread position:
               232-430
               

               Cow position:
               chr13:37555088-37554894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               187, 86
               

               Conread position:
               232-431
               

               Cow position:
               chr13:56535250-56535434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               232-434
               

               Cow position:
               chr13:5092612-5092408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               232-436
               

               Cow position:
               chr13:9612858-9613046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               232-440
               

               Cow position:
               chr13:15621592-15621799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               232-442
               

               Cow position:
               chr13:15144048-15143851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               187, 69
               

               Conread position:
               232-442
               

               Cow position:
               chr13:18491390-18491588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               188, 36
               

               Conread position:
               232-442
               

               Cow position:
               chr13:37614415-37614198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               98, 90
               

               Conread position:
               232-446
               

               Cow position:
               chr13:50623028-50622817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               187, 47
               

               Conread position:
               232-461
               

               Cow position:
               chr13:13196024-13196249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               187, 59
               

               Conread position:
               232-464
               

               Cow position:
               chr13:4552609-4552826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               232-464
               

               Cow position:
               chr13:54582657-54582884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               187, 75
               

               Conread position:
               232-465
               

               Cow position:
               chr13:3209540-3209302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               232-465
               

               Cow position:
               chr13:14927036-14927278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               232-467
               

               Cow position:
               chr13:16714483-16714248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               174, 104
               

               Conread position:
               232-468
               

               Cow position:
               chr13:84374-84601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               232-469
               

               Cow position:
               chr13:38284188-38283959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               232-489
               

               Cow position:
               chr13:20534683-20534939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 31
               

               Conread position:
               232-490
               

               Cow position:
               chr13:13533879-13533624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               109, 86
               

               Conread position:
               232-493
               

               Cow position:
               chr13:15195418-15195161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               209, 82
               

               Conread position:
               232-494
               

               Cow position:
               chr13:1568717-1568973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               218, 70
               

               Conread position:
               232-494
               

               Cow position:
               chr13:6189817-6189560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 85
               

               Conread position:
               232-494
               

               Cow position:
               chr13:12989645-12989893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               191, 57
               

               Conread position:
               232-494
               

               Cow position:
               chr13:13501828-13501572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               187, 84
               

               Conread position:
               232-494
               

               Cow position:
               chr13:14411674-14411936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               78, 132
               

               Conread position:
               232-494
               

               Cow position:
               chr13:15239729-15239470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               232-494
               

               Cow position:
               chr13:15756899-15757170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               232-494
               

               Cow position:
               chr13:17292345-17292083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               201, 76
               

               Conread position:
               232-494
               

               Cow position:
               chr13:17821475-17821218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               187, 74
               

               Conread position:
               232-494
               

               Cow position:
               chr13:25695984-25695721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               232-494
               

               Cow position:
               chr13:44322675-44322952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               120, 89
               

               Conread position:
               232-494
               

               Cow position:
               chr13:52477862-52477596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 80
               

               Conread position:
               232-494
               

               Cow position:
               chr13:54701964-54702237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               232-494
               

               Cow position:
               chr13:60375705-60375438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               232-496
               

               Cow position:
               chr13:18058464-18058194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 86
               

               Conread position:
               232-496
               

               Cow position:
               chr13:54389235-54388967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               123, 31
               

               Conread position:
               233-346
               

               Cow position:
               chr13:25532227-25532115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               233-381
               

               Cow position:
               chr13:41474660-41474802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               233-392
               

               Cow position:
               chr13:47651631-47651475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               99, 81
               

               Conread position:
               233-404
               

               Cow position:
               chr13:53619784-53619957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               233-411
               

               Cow position:
               chr13:38335095-38334916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               233-414
               

               Cow position:
               chr13:23685219-23685036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               233-416
               

               Cow position:
               chr13:22046226-22046043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               233-417
               

               Cow position:
               chr13:11933822-11933636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 116
               

               Conread position:
               233-417
               

               Cow position:
               chr13:25521140-25520949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               233-417
               

               Cow position:
               chr13:30148771-30148597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               233-431
               

               Cow position:
               chr13:33854897-33854703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 34
               

               Conread position:
               233-440
               

               Cow position:
               chr13:6486469-6486261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 179
               

               Conread position:
               233-441
               

               Cow position:
               chr13:42200404-42200610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               183, 77
               

               Conread position:
               233-442
               

               Cow position:
               chr13:15061706-15061489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               233-442
               

               Cow position:
               chr13:16014587-16014805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               233-442
               

               Cow position:
               chr13:17977126-17977342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 125
               

               Conread position:
               233-442
               

               Cow position:
               chr13:43525465-43525243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               233-442
               

               Cow position:
               chr13:47243768-47243563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               233-444
               

               Cow position:
               chr13:56035073-56034866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               176, 87
               

               Conread position:
               233-468
               

               Cow position:
               chr13:20497426-20497669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 114
               

               Conread position:
               233-492
               

               Cow position:
               chr13:46525645-46525388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               233-493
               

               Cow position:
               chr13:11231512-11231259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               233-493
               

               Cow position:
               chr13:17114597-17114327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 99
               

               Conread position:
               233-494
               

               Cow position:
               chr13:12670668-12670395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               186, 48
               

               Conread position:
               233-494
               

               Cow position:
               chr13:19022048-19022325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               233-494
               

               Cow position:
               chr13:26262006-26261749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               233-494
               

               Cow position:
               chr13:53573763-53574020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               233-494
               

               Cow position:
               chr13:55582978-55583243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               233-495
               

               Cow position:
               chr13:20288122-20288381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 81
               

               Conread position:
               233-496
               

               Cow position:
               chr13:45073462-45073201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               152, 34
               

               Conread position:
               234-315
               

               Cow position:
               chr13:27170688-27170607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-361
               

               Cow position:
               chr13:21012750-21012880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               234-370
               

               Cow position:
               chr13:46330154-46330017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 89
               

               Conread position:
               234-374
               

               Cow position:
               chr13:27146605-27146747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               234-379
               

               Cow position:
               chr13:58157272-58157129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               234-383
               

               Cow position:
               chr13:39775705-39775551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 131
               

               Conread position:
               234-388
               

               Cow position:
               chr13:20413770-20413611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               234-391
               

               Cow position:
               chr13:19223436-19223595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 129
               

               Conread position:
               234-391
               

               Cow position:
               chr13:43102766-43102923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 124
               

               Conread position:
               234-392
               

               Cow position:
               chr13:390852-390699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 27
               

               Conread position:
               234-399
               

               Cow position:
               chr13:21024768-21024935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               234-399
               

               Cow position:
               chr13:29665802-29665969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-399
               

               Cow position:
               chr13:33518174-33518008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 126
               

               Conread position:
               234-406
               

               Cow position:
               chr13:28695644-28695815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               234-413
               

               Cow position:
               chr13:54681880-54682065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               234-416
               

               Cow position:
               chr13:10511921-10511736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               234-417
               

               Cow position:
               chr13:11434789-11434609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               234-417
               

               Cow position:
               chr13:18876987-18877172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               234-417
               

               Cow position:
               chr13:40541324-40541139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-417
               

               Cow position:
               chr13:45130301-45130480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               234-431
               

               Cow position:
               chr13:8350087-8350304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               234-442
               

               Cow position:
               chr13:5263494-5263289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               123, 80
               

               Conread position:
               234-442
               

               Cow position:
               chr13:14795991-14796197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               234-442
               

               Cow position:
               chr13:34873370-34873581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 129
               

               Conread position:
               234-442
               

               Cow position:
               chr13:45352812-45353023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               84, 113
               

               Conread position:
               234-462
               

               Cow position:
               chr13:1462506-1462281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               211, 9
               

               Conread position:
               234-472
               

               Cow position:
               chr13:15083448-15083685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               234-490
               

               Cow position:
               chr13:26480418-26480167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               170, 33
               

               Conread position:
               234-492
               

               Cow position:
               chr13:12045561-12045288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               234-492
               

               Cow position:
               chr13:43479847-43480105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               234-493
               

               Cow position:
               chr13:8362962-8362699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 204
               

               Conread position:
               234-493
               

               Cow position:
               chr13:43595320-43595060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               234-494
               

               Cow position:
               chr13:6860960-6861232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 250
               

               Conread position:
               234-494
               

               Cow position:
               chr13:7149022-7149280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               182, 40
               

               Conread position:
               234-494
               

               Cow position:
               chr13:9975283-9975026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               131, 72
               

               Conread position:
               234-494
               

               Cow position:
               chr13:15193103-15192840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               209, 184
               

               Conread position:
               234-494
               

               Cow position:
               chr13:16038498-16038243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               185, 80
               

               Conread position:
               234-494
               

               Cow position:
               chr13:17611766-17611500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               234-494
               

               Cow position:
               chr13:21136127-21135850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               234-494
               

               Cow position:
               chr13:30258633-30258899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               234-494
               

               Cow position:
               chr13:45074118-45073868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               166, 70
               

               Conread position:
               234-494
               

               Cow position:
               chr13:52749678-52749428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 52
               

               Conread position:
               234-494
               

               Cow position:
               chr13:54128813-54128544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               234-494
               

               Cow position:
               chr13:55161995-55162261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               234-494
               

               Cow position:
               chr13:57475632-57475367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 172
               

               Conread position:
               235-316
               

               Cow position:
               chr13:47356320-47356401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-355
               

               Cow position:
               chr13:34606475-34606597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               235-370
               

               Cow position:
               chr13:18874918-18875055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-381
               

               Cow position:
               chr13:15114253-15114401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               235-382
               

               Cow position:
               chr13:20042478-20042329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               235-383
               

               Cow position:
               chr13:55327225-55327373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               235-385
               

               Cow position:
               chr13:2529166-2529016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 90
               

               Conread position:
               235-388
               

               Cow position:
               chr13:55007984-55007835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 88
               

               Conread position:
               235-391
               

               Cow position:
               chr13:4954330-4954486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 122
               

               Conread position:
               235-392
               

               Cow position:
               chr13:28587960-28587801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               235-397
               

               Cow position:
               chr13:23795593-23795442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               235-411
               

               Cow position:
               chr13:21246927-21246749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 112
               

               Conread position:
               235-414
               

               Cow position:
               chr13:22115461-22115640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               235-414
               

               Cow position:
               chr13:48373530-48373355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 68
               

               Conread position:
               235-414
               

               Cow position:
               chr13:50565525-50565350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               235-414
               

               Cow position:
               chr13:52464525-52464704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 127
               

               Conread position:
               235-414
               

               Cow position:
               chr13:53357615-53357796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               235-417
               

               Cow position:
               chr13:369340-369157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               71, 112
               

               Conread position:
               235-417
               

               Cow position:
               chr13:3153533-3153716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               235-417
               

               Cow position:
               chr13:8637480-8637664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               235-417
               

               Cow position:
               chr13:11146839-11147023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               235-417
               

               Cow position:
               chr13:11543346-11543535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 117
               

               Conread position:
               235-417
               

               Cow position:
               chr13:19033341-19033524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               235-417
               

               Cow position:
               chr13:26422823-26423017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-417
               

               Cow position:
               chr13:29802413-29802581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               235-419
               

               Cow position:
               chr13:57322935-57323116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               176, 71
               

               Conread position:
               235-427
               

               Cow position:
               chr13:19222458-19222655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 109
               

               Conread position:
               235-430
               

               Cow position:
               chr13:42302256-42302060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 115
               

               Conread position:
               235-442
               

               Cow position:
               chr13:7104444-7104646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               184, 18
               

               Conread position:
               235-442
               

               Cow position:
               chr13:10210867-10210667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               235-442
               

               Cow position:
               chr13:14644839-14645043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               165, 85
               

               Conread position:
               235-442
               

               Cow position:
               chr13:24215891-24215681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               235-442
               

               Cow position:
               chr13:25941476-25941271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 26
               

               Conread position:
               235-442
               

               Cow position:
               chr13:32282912-32283119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 17
               

               Conread position:
               235-442
               

               Cow position:
               chr13:55080924-55081134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               235-450
               

               Cow position:
               chr13:26960012-26959797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 73
               

               Conread position:
               235-473
               

               Cow position:
               chr13:7076026-7076280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 193
               

               Conread position:
               235-493
               

               Cow position:
               chr13:57770197-57769959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               235-494
               

               Cow position:
               chr13:9906514-9906783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 104
               

               Conread position:
               235-494
               

               Cow position:
               chr13:12770407-12770142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 112
               

               Conread position:
               235-494
               

               Cow position:
               chr13:18299180-18299454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               235-494
               

               Cow position:
               chr13:20261548-20261274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 101
               

               Conread position:
               235-494
               

               Cow position:
               chr13:20360061-20360326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               87, 124
               

               Conread position:
               235-494
               

               Cow position:
               chr13:21288299-21288036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 88
               

               Conread position:
               235-494
               

               Cow position:
               chr13:39826341-39826602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               235-494
               

               Cow position:
               chr13:52641165-52640900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               235-494
               

               Cow position:
               chr13:52893934-52894193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               235-494
               

               Cow position:
               chr13:55674424-55674159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 246
               

               Conread position:
               235-496
               

               Cow position:
               chr13:18696609-18696895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 139
               

               Conread position:
               236-398
               

               Cow position:
               chr13:6972167-6972330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               236-420
               

               Cow position:
               chr13:17135428-17135244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               236-431
               

               Cow position:
               chr13:28439203-28439390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               183, 32
               

               Conread position:
               236-489
               

               Cow position:
               chr13:17971256-17970982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 151
               

               Conread position:
               236-494
               

               Cow position:
               chr13:15289132-15288873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               180, 78
               

               Conread position:
               237-399
               

               Cow position:
               chr13:16711134-16711297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               238-406
               

               Cow position:
               chr13:5992635-5992810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               238-441
               

               Cow position:
               chr13:16908002-16908208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               238-446
               

               Cow position:
               chr13:6926301-6926514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               238-494
               

               Cow position:
               chr13:4665061-4664816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               183, 68
               

               Conread position:
               238-494
               

               Cow position:
               chr13:11260066-11260320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               162, 80
               

               Conread position:
               238-494
               

               Cow position:
               chr13:24229999-24230259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               238-494
               

               Cow position:
               chr13:37803668-37803931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 218
               

               Conread position:
               238-494
               

               Cow position:
               chr13:48597698-48597959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               239-377
               

               Cow position:
               chr13:21070794-21070935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 110
               

               Conread position:
               239-377
               

               Cow position:
               chr13:62304359-62304497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 69
               

               Conread position:
               239-399
               

               Cow position:
               chr13:3278172-3278021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               239-414
               

               Cow position:
               chr13:24796673-24796841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               239-442
               

               Cow position:
               chr13:56958766-56958960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               239-443
               

               Cow position:
               chr13:20795417-20795217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               240-366
               

               Cow position:
               chr13:30809584-30809458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               240-389
               

               Cow position:
               chr13:10040765-10040622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               106, 64
               

               Conread position:
               240-392
               

               Cow position:
               chr13:17994582-17994432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               240-392
               

               Cow position:
               chr13:20214225-20214380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               240-397
               

               Cow position:
               chr13:40483189-40483033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               79, 85
               

               Conread position:
               240-397
               

               Cow position:
               chr13:42203822-42203970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               240-397
               

               Cow position:
               chr13:42613882-42614029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               240-399
               

               Cow position:
               chr13:46298963-46298808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               240-404
               

               Cow position:
               chr13:10055207-10055374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               240-404
               

               Cow position:
               chr13:27198705-27198861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               240-406
               

               Cow position:
               chr13:10279713-10279881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               240-406
               

               Cow position:
               chr13:10534879-10535045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               240-407
               

               Cow position:
               chr13:17624108-17624278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               240-407
               

               Cow position:
               chr13:26395250-26395417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               240-411
               

               Cow position:
               chr13:2776075-2776248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               240-411
               

               Cow position:
               chr13:5279418-5279238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 126
               

               Conread position:
               240-417
               

               Cow position:
               chr13:11410499-11410680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 80
               

               Conread position:
               240-417
               

               Cow position:
               chr13:11565630-11565803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               240-419
               

               Cow position:
               chr13:48126895-48127076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               240-421
               

               Cow position:
               chr13:13225687-13225857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               240-425
               

               Cow position:
               chr13:20174528-20174713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 181
               

               Conread position:
               240-425
               

               Cow position:
               chr13:22345484-22345302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               240-429
               

               Cow position:
               chr13:16099338-16099142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               240-430
               

               Cow position:
               chr13:13780967-13781160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               240-430
               

               Cow position:
               chr13:52913667-52913853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               179, 74
               

               Conread position:
               240-440
               

               Cow position:
               chr13:4790332-4790127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               240-440
               

               Cow position:
               chr13:33256288-33256486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               240-441
               

               Cow position:
               chr13:6980716-6980910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               179, 74
               

               Conread position:
               240-442
               

               Cow position:
               chr13:8699952-8699745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               240-442
               

               Cow position:
               chr13:10989283-10989082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 96
               

               Conread position:
               240-442
               

               Cow position:
               chr13:15993174-15993378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 108
               

               Conread position:
               240-442
               

               Cow position:
               chr13:19598874-19598673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               171, 68
               

               Conread position:
               240-442
               

               Cow position:
               chr13:37593155-37592954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               240-442
               

               Cow position:
               chr13:42849339-42849141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               240-445
               

               Cow position:
               chr13:2907097-2907296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               166, 28
               

               Conread position:
               240-445
               

               Cow position:
               chr13:49356258-49356054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               240-454
               

               Cow position:
               chr13:20115035-20115253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               240-463
               

               Cow position:
               chr13:49204803-49205019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               240-464
               

               Cow position:
               chr13:42640171-42640405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               240-468
               

               Cow position:
               chr13:14035208-14034979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 123
               

               Conread position:
               240-490
               

               Cow position:
               chr13:36876856-36877097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               179, 68
               

               Conread position:
               240-491
               

               Cow position:
               chr13:41157188-41157450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               240-492
               

               Cow position:
               chr13:21106934-21107191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 107
               

               Conread position:
               240-493
               

               Cow position:
               chr13:13088823-13089076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               176, 66
               

               Conread position:
               240-494
               

               Cow position:
               chr13:151761-152010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               179, 23
               

               Conread position:
               240-494
               

               Cow position:
               chr13:5671795-5671540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               176, 77
               

               Conread position:
               240-494
               

               Cow position:
               chr13:5758541-5758291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               240-494
               

               Cow position:
               chr13:15257576-15257319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 22
               

               Conread position:
               240-494
               

               Cow position:
               chr13:17021935-17021679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               240-494
               

               Cow position:
               chr13:17350134-17350403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               240-494
               

               Cow position:
               chr13:20784385-20784644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 77
               

               Conread position:
               240-494
               

               Cow position:
               chr13:21171781-21171522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               240-494
               

               Cow position:
               chr13:21235877-21235636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               240-494
               

               Cow position:
               chr13:27525468-27525215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               179, 27
               

               Conread position:
               240-494
               

               Cow position:
               chr13:45023432-45023162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               69, 172
               

               Conread position:
               240-495
               

               Cow position:
               chr13:21242285-21242033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               179, 67
               

               Conread position:
               240-496
               

               Cow position:
               chr13:7265315-7265069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               204, 61
               

               Conread position:
               241-338
               

               Cow position:
               chr13:20186642-20186547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               241-397
               

               Cow position:
               chr13:50714938-50715094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               116, 120
               

               Conread position:
               241-399
               

               Cow position:
               chr13:23823238-23823086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               241-405
               

               Cow position:
               chr13:23399558-23399720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               241-406
               

               Cow position:
               chr13:54128039-54127872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 110
               

               Conread position:
               241-410
               

               Cow position:
               chr13:17058064-17057888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               241-414
               

               Cow position:
               chr13:10715652-10715826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 65
               

               Conread position:
               241-418
               

               Cow position:
               chr13:6865872-6865698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               241-422
               

               Cow position:
               chr13:23805230-23805046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               241-422
               

               Cow position:
               chr13:38702845-38702659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               241-442
               

               Cow position:
               chr13:44003491-44003691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               241-464
               

               Cow position:
               chr13:39939774-39939564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               241-469
               

               Cow position:
               chr13:6663964-6663725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 160
               

               Conread position:
               241-494
               

               Cow position:
               chr13:15041683-15041424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               75, 84
               

               Conread position:
               241-494
               

               Cow position:
               chr13:19278887-19279146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               241-494
               

               Cow position:
               chr13:34729049-34728792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               241-494
               

               Cow position:
               chr13:35557319-35557055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 76
               

               Conread position:
               241-494
               

               Cow position:
               chr13:61977166-61976915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 113
               

               Conread position:
               242-399
               

               Cow position:
               chr13:39347434-39347278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               242-410
               

               Cow position:
               chr13:1037429-1037598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               242-417
               

               Cow position:
               chr13:50457644-50457824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               242-418
               

               Cow position:
               chr13:20088926-20088748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               242-422
               

               Cow position:
               chr13:52177395-52177572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               170, 76
               

               Conread position:
               242-469
               

               Cow position:
               chr13:33054580-33054356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               242-478
               

               Cow position:
               chr13:58763816-58763590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               174, 64
               

               Conread position:
               242-492
               

               Cow position:
               chr13:20473882-20473634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               177, 65
               

               Conread position:
               242-494
               

               Cow position:
               chr13:18197815-18197557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 75
               

               Conread position:
               242-494
               

               Cow position:
               chr13:20378525-20378286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               242-496
               

               Cow position:
               chr13:37818952-37818698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               244-397
               

               Cow position:
               chr13:9492571-9492717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               244-425
               

               Cow position:
               chr13:52027341-52027165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               244-494
               

               Cow position:
               chr13:19007738-19007982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               245-388
               

               Cow position:
               chr13:17958636-17958776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 61
               

               Conread position:
               245-411
               

               Cow position:
               chr13:6442311-6442145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               245-469
               

               Cow position:
               chr13:25978398-25978169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               68, 116
               

               Conread position:
               245-494
               

               Cow position:
               chr13:15974414-15974662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               246-406
               

               Cow position:
               chr13:20520107-20520270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               246-494
               

               Cow position:
               chr13:26698700-26698448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               173, 68
               

               Conread position:
               246-494
               

               Cow position:
               chr13:46111765-46112016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               173, 53
               

               Conread position:
               247-416
               

               Cow position:
               chr13:18615169-18615349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               247-417
               

               Cow position:
               chr13:4404332-4404497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               247-422
               

               Cow position:
               chr13:16834738-16834559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               247-440
               

               Cow position:
               chr13:18340328-18340523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 71
               

               Conread position:
               247-464
               

               Cow position:
               chr13:21110471-21110696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               247-494
               

               Cow position:
               chr13:20868948-20868706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 67
               

               Conread position:
               248-391
               

               Cow position:
               chr13:12185810-12185666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 99
               

               Conread position:
               248-397
               

               Cow position:
               chr13:57446314-57446173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               248-399
               

               Cow position:
               chr13:8667414-8667567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               248-406
               

               Cow position:
               chr13:26109796-26109957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 150
               

               Conread position:
               248-417
               

               Cow position:
               chr13:8537617-8537788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               248-422
               

               Cow position:
               chr13:49475870-49476049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               248-494
               

               Cow position:
               chr13:12974614-12974853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               248-494
               

               Cow position:
               chr13:38548384-38548628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               248-494
               

               Cow position:
               chr13:48165624-48165374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               171, 20
               

               Conread position:
               249-442
               

               Cow position:
               chr13:37521949-37521752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               249-494
               

               Cow position:
               chr13:24369385-24369632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               170, 15
               

               Conread position:
               250-382
               

               Cow position:
               chr13:8423202-8423336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               250-417
               

               Cow position:
               chr13:24155311-24155479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 159
               

               Conread position:
               250-442
               

               Cow position:
               chr13:6465882-6465698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               250-448
               

               Cow position:
               chr13:38012140-38012330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               169, 67
               

               Conread position:
               250-494
               

               Cow position:
               chr13:19779054-19778799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 107
               

               Conread position:
               250-494
               

               Cow position:
               chr13:51128275-51128020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               252-494
               

               Cow position:
               chr13:20154809-20155050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               168, 13
               

               Conread position:
               257-496
               

               Cow position:
               chr13:13211696-13211938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               163, 60
               

               Conread position:
               261-413
               

               Cow position:
               chr13:52249233-52249086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               262-430
               

               Cow position:
               chr13:9391377-9391540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               157, 15
               

               Conread position:
               265-494
               

               Cow position:
               chr13:21176503-21176272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               154, 43
               

               Conread position:
               266-424
               

               Cow position:
               chr13:6976026-6975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               150, 54
               

               Conread position:
               268-470
               

               Cow position:
               chr13:23478847-23479048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               151, 177
               

               Conread position:
               268-494
               

               Cow position:
               chr13:20666567-20666335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               151, 50
               

               Conread position:
               271-494
               

               Cow position:
               chr13:52057379-52057610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               148, 46
               

               Conread position:
               274-397
               

               Cow position:
               chr13:34694187-34694066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               274-399
               

               Cow position:
               chr13:38703054-38702931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               274-431
               

               Cow position:
               chr13:20876094-20875937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               274-469
               

               Cow position:
               chr13:16160245-16160439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 46
               

               Conread position:
               281-443
               

               Cow position:
               chr13:37980927-37980765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               283-417
               

               Cow position:
               chr13:43919432-43919295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               284-414
               

               Cow position:
               chr13:62325796-62325928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               290-442
               

               Cow position:
               chr13:11460475-11460625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               294-458
               

               Cow position:
               chr13:51814087-51813918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               295-494
               

               Cow position:
               chr13:19320374-19320585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 181
               

               Conread position:
               295-494
               

               Cow position:
               chr13:23856055-23856262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               124, 134
               

               Conread position:
               299-493
               

               Cow position:
               chr13:8232851-8233044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               144, 23
               

               Conread position:
               301-496
               

               Cow position:
               chr13:18172186-18172390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               113, 120
               

               Conread position:
               302-414
               

               Cow position:
               chr13:28652592-28652704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               302-430
               

               Cow position:
               chr13:20826873-20826743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               302-442
               

               Cow position:
               chr13:19750566-19750707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               302-489
               

               Cow position:
               chr13:17439917-17439725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               117, 97
               

               Conread position:
               302-490
               

               Cow position:
               chr13:37381652-37381847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               302-494
               

               Cow position:
               chr13:547346-547535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               302-494
               

               Cow position:
               chr13:8355057-8355255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 11
               

               Conread position:
               302-494
               

               Cow position:
               chr13:20679190-20679389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 177
               

               Conread position:
               302-494
               

               Cow position:
               chr13:37640441-37640633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               302-496
               

               Cow position:
               chr13:36771572-36771368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               303-431
               

               Cow position:
               chr13:12237297-12237426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               303-442
               

               Cow position:
               chr13:51116171-51116032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               303-494
               

               Cow position:
               chr13:11381870-11381670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               304-494
               

               Cow position:
               chr13:20706352-20706156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               305-491
               

               Cow position:
               chr13:6087038-6086855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               305-493
               

               Cow position:
               chr13:40634718-40634902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 141
               

               Conread position:
               305-494
               

               Cow position:
               chr13:17563594-17563786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               114, 40
               

               Conread position:
               305-494
               

               Cow position:
               chr13:56148375-56148573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               305-494
               

               Cow position:
               chr13:56160592-56160394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               305-496
               

               Cow position:
               chr13:47022221-47022415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               305-496
               

               Cow position:
               chr13:56155297-56155101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               306-442
               

               Cow position:
               chr13:15460919-15460784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               113, 17
               

               Conread position:
               307-442
               

               Cow position:
               chr13:21294931-21295067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               307-494
               

               Cow position:
               chr13:55316341-55316139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 168
               

               Conread position:
               307-494
               

               Cow position:
               chr13:55727758-55727950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               308-492
               

               Cow position:
               chr13:50568549-50568369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               308-494
               

               Cow position:
               chr13:3211405-3211601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               309-431
               

               Cow position:
               chr13:21188226-21188349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               315-494
               

               Cow position:
               chr13:13176515-13176701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               101, 17
               

               Conread position:
               315-496
               

               Cow position:
               chr13:37528089-37527912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               104, 131
               

               Conread position:
               319-490
               

               Cow position:
               chr13:40722839-40722665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               319-492
               

               Cow position:
               chr13:48037491-48037669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 38
               

               Conread position:
               321-494
               

               Cow position:
               chr13:31813745-31813927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               321-494
               

               Cow position:
               chr13:37981874-37981695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               90, 76
               

               Conread position:
               324-494
               

               Cow position:
               chr13:10929115-10928942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 85
               

               Conread position:
               324-494
               

               Cow position:
               chr13:15885147-15884970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               326-494
               

               Cow position:
               chr13:37484404-37484222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               329-494
               

               Cow position:
               chr13:15144487-15144315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               329-494
               

               Cow position:
               chr13:18181897-18181723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               329-494
               

               Cow position:
               chr13:18835082-18835242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               330-441
               

               Cow position:
               chr13:16156346-16156234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               331-487
               

               Cow position:
               chr13:15902904-15903066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               336-493
               

               Cow position:
               chr13:29123189-29123354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               348-494
               

               Cow position:
               chr13:15233823-15233972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 119
               
Show alignments to all cow chromosomes.
Conread position:	159-414
Cow position:	chr13:19177876-19178141 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	156
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	75, 196
Conread position:	177-407
Cow position:	chr13:3149706-3149475 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	159
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	46, 17
Conread position:	177-457
Cow position:	chr13:49823751-49824029 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	162
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	143, 232
Conread position:	184-484
Cow position:	chr13:7149765-7149473 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	215
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	41, 12
Conread position:	190-494
Cow position:	chr13:52934165-52934466 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	209
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	14, 78
Conread position:	204-494
Cow position:	chr13:311190-311480 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	209
Alignm E-value:	6e-38
Alignm gaps (pig, cow):	21, 34
Conread position:	206-397
Cow position:	chr13:4965155-4965336 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	142
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	31, 11
Conread position:	208-355
Cow position:	chr13:19182913-19182766 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	111
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	28, 117
Conread position:	209-338
Cow position:	chr13:7114386-7114258 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	101
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	28, 7
Conread position:	211-442
Cow position:	chr13:20579679-20579900 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	165
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	24, 63
Conread position:	212-447
Cow position:	chr13:54627244-54627485 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	173
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	92, 160
Conread position:	213-407
Cow position:	chr13:1339382-1339185 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	146
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	9, 135
Conread position:	213-494
Cow position:	chr13:24585812-24586093 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	221
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 13
Conread position:	215-415
Cow position:	chr13:55143041-55143237 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	149
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	23, 0
Conread position:	215-494
Cow position:	chr13:20271464-20271177 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	208
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	87, 26
Conread position:	216-442
Cow position:	chr13:18166500-18166724 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	171
Alignm E-value:	8.00001e-42
Alignm gaps (pig, cow):	203, 25
Conread position:	216-494
Cow position:	chr13:25817298-25817578 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	225
Alignm E-value:	0
Alignm gaps (pig, cow):	203, 22
Conread position:	219-414
Cow position:	chr13:10711641-10711452 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	154
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	25, 0
Conread position:	219-493
Cow position:	chr13:34263599-34263320 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	205
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	23, 29
Conread position:	219-494
Cow position:	chr13:29831654-29831387 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	190
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	200, 8