Cow genome map
| Conread name: | Pig1-9F22 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:6068176-6067970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:16737532-16737739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:39358820-39358620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 67, 178 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:55170131-55170331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 65, 91 | 
| Conread position: | 2-198 | 
| Cow position: | chr6:14949999-14949791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:4389373-4389581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:11442309-11442102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:33451482-33451691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 67, 170 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:34476095-34475888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:47574446-47574649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:53345308-53345516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:61632085-61631893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-200 | 
| Cow position: | chr6:17865052-17865261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 2-202 | 
| Cow position: | chr6:49411165-49410956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 2-245 | 
| Cow position: | chr6:34030914-34031149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 42, 104 | 
| Conread position: | 2-250 | 
| Cow position: | chr6:46162001-46161756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 201, 0 | 
| Conread position: | 2-264 | 
| Cow position: | chr6:48327866-48328142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 17, 157 | 
| Conread position: | 2-281 | 
| Cow position: | chr6:29484635-29484911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 195, 0 | 
| Conread position: | 3-197 | 
| Cow position: | chr6:1891347-1891143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 3-197 | 
| Cow position: | chr6:28343163-28343369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 3-297 | 
| Cow position: | chr6:19809194-19809493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 58, 204 | 
| Conread position: | 4-199 | 
| Cow position: | chr6:45065518-45065312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:6768802-6768997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 76, 61 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:59687269-59687467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 71, 0 | 
Show alignments to all cow chromosomes.
