Cow genome map

Conread name: Pig1-9K17

Conread position: 38-313
Cow position: chr18:49324226-49324497 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 113

Conread position: 48-318
Cow position: chr18:16659233-16659499 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 92

Conread position: 50-317
Cow position: chr18:3180598-3180344 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 85

Conread position: 53-253
Cow position: chr18:42978448-42978648 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 30

Conread position: 53-323
Cow position: chr18:5632451-5632195 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 79

Conread position: 54-272
Cow position: chr18:39097388-39097598 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 19

Conread position: 54-304
Cow position: chr18:6075206-6075449 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 29

Conread position: 55-305
Cow position: chr18:51867332-51867604 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 81

Conread position: 55-318
Cow position: chr18:11691222-11691476 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 81

Conread position: 56-278
Cow position: chr18:49602860-49603071 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 17

Conread position: 58-306
Cow position: chr18:2773205-2773448 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 79

Conread position: 58-306
Cow position: chr18:2776708-2776951 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 79

Conread position: 58-313
Cow position: chr18:34219726-34219986 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 20

Conread position: 60-276
Cow position: chr18:8208246-8208451 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 12

Conread position: 60-313
Cow position: chr18:56183326-56183566 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 21

Conread position: 61-280
Cow position: chr18:21751558-21751345 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 75

Conread position: 62-173
Cow position: chr18:40356767-40356880 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 71

Conread position: 62-238
Cow position: chr18:8390388-8390202 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 62-244
Cow position: chr18:29402377-29402194 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 20

Conread position: 62-245
Cow position: chr18:15351549-15351725 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 47

Conread position: 62-257
Cow position: chr18:19701858-19701670 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 22

Conread position: 62-275
Cow position: chr18:697042-697242 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 70

Conread position: 62-278
Cow position: chr18:46277108-46277314 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 62-278
Cow position: chr18:49161127-49161331 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 62-279
Cow position: chr18:45186047-45185843 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 62-294
Cow position: chr18:47486225-47486000 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 76

Conread position: 62-302
Cow position: chr18:42427793-42427568 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 61

Conread position: 62-305
Cow position: chr18:4495712-4495941 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 54

Conread position: 62-305
Cow position: chr18:27388768-27388529 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 88, 15

Conread position: 62-306
Cow position: chr18:23941439-23941679 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 76

Conread position: 62-306
Cow position: chr18:46879983-46880225 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 62-306
Cow position: chr18:54572112-54572347 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 73

Conread position: 62-307
Cow position: chr18:53053051-53053291 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 75

Conread position: 62-308
Cow position: chr18:32253329-32253567 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 78

Conread position: 62-313
Cow position: chr18:23163072-23162830 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 68

Conread position: 62-313
Cow position: chr18:27079044-27078804 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 74

Conread position: 62-313
Cow position: chr18:50382428-50382190 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 71

Conread position: 62-316
Cow position: chr18:31556980-31557226 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 71

Conread position: 62-317
Cow position: chr18:52251677-52251924 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 25, 74

Conread position: 62-318
Cow position: chr18:1571060-1571303 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 75

Conread position: 62-318
Cow position: chr18:22120708-22120951 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 46

Conread position: 62-319
Cow position: chr18:24343035-24342772 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 20

Conread position: 62-320
Cow position: chr18:7965411-7965162 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 72

Conread position: 62-321
Cow position: chr18:44909229-44908982 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 74

Conread position: 62-323
Cow position: chr18:23446882-23447134 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 20

Conread position: 62-323
Cow position: chr18:55747867-55747613 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 76

Conread position: 63-255
Cow position: chr18:22045235-22045418 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 77

Conread position: 63-279
Cow position: chr18:39460392-39460191 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 35

Conread position: 63-283
Cow position: chr18:49040435-49040650 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 71, 18

Conread position: 63-291
Cow position: chr18:37187815-37188038 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 76

Conread position: 63-303
Cow position: chr18:14172037-14172260 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 73

Conread position: 63-304
Cow position: chr18:4851314-4851531 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 63-306
Cow position: chr18:21081704-21081947 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 44

Conread position: 63-313
Cow position: chr18:36768643-36768874 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 63-318
Cow position: chr18:37023361-37023616 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 63-319
Cow position: chr18:4264219-4264462 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 72

Conread position: 63-323
Cow position: chr18:18369176-18369433 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 71, 21

Conread position: 63-323
Cow position: chr18:39875066-39875330 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 87

Conread position: 64-233
Cow position: chr18:19881986-19882160 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 16

Conread position: 64-271
Cow position: chr18:41724643-41724839 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 64-279
Cow position: chr18:30295434-30295653 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 103

Conread position: 64-280
Cow position: chr18:20998235-20998446 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 66

Conread position: 64-280
Cow position: chr18:23821660-23821862 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 64-293
Cow position: chr18:53092839-53093061 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 32

Conread position: 64-313
Cow position: chr18:46072647-46072401 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 40

Conread position: 64-314
Cow position: chr18:11867517-11867273 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 73

Conread position: 64-318
Cow position: chr18:3158412-3158665 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 112, 16

Conread position: 64-319
Cow position: chr18:7956324-7956078 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 44

Conread position: 64-323
Cow position: chr18:10051922-10051674 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 44

Conread position: 64-323
Cow position: chr18:40759397-40759136 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 65-242
Cow position: chr18:50384287-50384118 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 65-252
Cow position: chr18:47175204-47175383 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 72

Conread position: 65-260
Cow position: chr18:41553191-41553379 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 68

Conread position: 65-262
Cow position: chr18:52387043-52387232 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 72

Conread position: 65-264
Cow position: chr18:17195172-17195359 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 68

Conread position: 65-273
Cow position: chr18:14091171-14090958 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 19

Conread position: 65-280
Cow position: chr18:18664190-18664403 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 72

Conread position: 65-306
Cow position: chr18:28768565-28768310 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 137

Conread position: 65-316
Cow position: chr18:35888919-35889161 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 69, 16

Conread position: 65-318
Cow position: chr18:45104257-45104509 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 154, 67

Conread position: 66-282
Cow position: chr18:47806096-47806316 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 107

Conread position: 66-292
Cow position: chr18:23649099-23648880 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 71

Conread position: 66-314
Cow position: chr18:24529664-24529933 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 165

Conread position: 66-318
Cow position: chr18:48633950-48633718 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 42

Conread position: 66-323
Cow position: chr18:39623977-39623728 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 20, 74

Conread position: 67-262
Cow position: chr18:4000523-4000334 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 70

Conread position: 67-315
Cow position: chr18:35534978-35535211 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 40

Conread position: 67-323
Cow position: chr18:10656623-10656364 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 83, 15

Conread position: 67-323
Cow position: chr18:51643197-51643438 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 69

Conread position: 69-237
Cow position: chr18:30676482-30676646 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 67

Conread position: 69-276
Cow position: chr18:41703004-41702811 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 67

Conread position: 69-284
Cow position: chr18:237943-238150 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 67

Conread position: 69-299
Cow position: chr18:19796748-19796972 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 66

Conread position: 69-317
Cow position: chr18:50974118-50974361 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 18

Conread position: 70-237
Cow position: chr18:37690320-37690163 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 66

Conread position: 70-280
Cow position: chr18:35795051-35795252 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 66

Conread position: 70-280
Cow position: chr18:49970482-49970683 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 36

Conread position: 70-304
Cow position: chr18:38211328-38211107 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 17, 66

Conread position: 70-313
Cow position: chr18:29372039-29371803 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 66

Conread position: 71-264
Cow position: chr18:5189523-5189707 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 55

Conread position: 72-258
Cow position: chr18:39865834-39866019 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 15, 35

Conread position: 72-263
Cow position: chr18:23921519-23921715 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 12

Conread position: 72-306
Cow position: chr18:4555997-4556222 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 61

Conread position: 72-306
Cow position: chr18:10214024-10214247 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 61

Conread position: 72-313
Cow position: chr18:17390823-17391056 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 74

Conread position: 72-315
Cow position: chr18:42479413-42479652 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 61

Conread position: 72-318
Cow position: chr18:22568901-22569133 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 48

Conread position: 72-318
Cow position: chr18:24266239-24266475 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 72-321
Cow position: chr18:18699331-18699070 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 72-323
Cow position: chr18:1954413-1954661 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 75

Conread position: 72-323
Cow position: chr18:12270679-12270428 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 68

Conread position: 72-323
Cow position: chr18:45903729-45903967 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 61

Conread position: 72-323
Cow position: chr18:51383231-51383468 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 64

Conread position: 73-245
Cow position: chr18:2576527-2576695 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 68

Conread position: 73-270
Cow position: chr18:30921398-30921195 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 45

Conread position: 73-277
Cow position: chr18:2108414-2108220 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 55

Conread position: 73-278
Cow position: chr18:4489735-4489936 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 73

Conread position: 73-305
Cow position: chr18:15025869-15025618 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 34

Conread position: 73-307
Cow position: chr18:30341016-30341237 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 68

Conread position: 73-311
Cow position: chr18:43555347-43555585 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 60

Conread position: 73-312
Cow position: chr18:45558309-45558085 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 63

Conread position: 73-313
Cow position: chr18:247534-247752 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 223, 9

Conread position: 73-313
Cow position: chr18:20270845-20271082 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 63

Conread position: 73-313
Cow position: chr18:50959655-50959423 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 62

Conread position: 73-316
Cow position: chr18:53642586-53642815 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 62

Conread position: 73-317
Cow position: chr18:38937986-38937755 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 63

Conread position: 73-318
Cow position: chr18:3044623-3044382 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 178

Conread position: 73-318
Cow position: chr18:41950379-41950141 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 27

Conread position: 73-323
Cow position: chr18:5701430-5701178 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 189

Conread position: 73-323
Cow position: chr18:18918797-18919028 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 63

Conread position: 73-323
Cow position: chr18:31672352-31672583 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 63

Conread position: 73-323
Cow position: chr18:35693041-35692784 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 80

Conread position: 73-323
Cow position: chr18:37303320-37303074 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 63

Conread position: 73-323
Cow position: chr18:43283590-43283829 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 54

Conread position: 74-271
Cow position: chr18:18320383-18320577 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 78

Conread position: 74-314
Cow position: chr18:52649174-52649411 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 66

Conread position: 74-323
Cow position: chr18:5647973-5647740 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 62

Conread position: 74-323
Cow position: chr18:47547817-47548055 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 33

Conread position: 77-272
Cow position: chr18:19961974-19962165 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 56

Conread position: 77-272
Cow position: chr18:56150302-56150497 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 75

Conread position: 77-273
Cow position: chr18:50612354-50612554 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 59

Conread position: 77-283
Cow position: chr18:19809521-19809715 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 59

Conread position: 81-312
Cow position: chr18:35874234-35874018 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 54

Conread position: 81-322
Cow position: chr18:3212036-3211806 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 81-323
Cow position: chr18:43950984-43950751 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 133, 50

Conread position: 82-292
Cow position: chr18:33159098-33158901 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 82-321
Cow position: chr18:36459107-36458864 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 14

Conread position: 82-323
Cow position: chr18:53039004-53038756 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 84-294
Cow position: chr18:47963792-47963581 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 99

Conread position: 84-311
Cow position: chr18:56157904-56157651 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 84-315
Cow position: chr18:39662934-39662714 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 84-318
Cow position: chr18:47417153-47416933 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 228, 50

Conread position: 84-320
Cow position: chr18:26999042-26998814 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 175, 47

Conread position: 87-226
Cow position: chr18:35478677-35478531 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 87-272
Cow position: chr18:26586462-26586636 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 87-278
Cow position: chr18:3097875-3098060 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 87-302
Cow position: chr18:25757164-25757363 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 47

Conread position: 87-306
Cow position: chr18:23652964-23653179 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 175, 42

Conread position: 87-317
Cow position: chr18:37381941-37382155 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 87-318
Cow position: chr18:38601735-38601953 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 177, 47

Conread position: 87-323
Cow position: chr18:22055712-22055947 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 58

Conread position: 90-283
Cow position: chr18:34490428-34490247 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 146, 44

Conread position: 90-294
Cow position: chr18:30359996-30360195 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 198, 44

Conread position: 90-305
Cow position: chr18:42747745-42747537 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 90-305
Cow position: chr18:48112819-48113019 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 206, 41

Conread position: 90-306
Cow position: chr18:40047357-40047554 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 90-314
Cow position: chr18:6399475-6399696 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 62

Conread position: 91-321
Cow position: chr18:52245368-52245123 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 43

Conread position: 92-320
Cow position: chr18:4534861-4535091 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 214

Conread position: 93-320
Cow position: chr18:4673467-4673238 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 165

Conread position: 93-320
Cow position: chr18:34834640-34834425 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 220, 46

Conread position: 94-313
Cow position: chr18:34813793-34813583 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 213, 40

Conread position: 107-245
Cow position: chr18:37810188-37810328 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 107-312
Cow position: chr18:2774006-2774200 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 107-315
Cow position: chr18:11754263-11754069 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 107-317
Cow position: chr18:52414104-52413898 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 158, 27

Conread position: 108-306
Cow position: chr18:33883918-33883728 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 108-308
Cow position: chr18:2619068-2619271 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 108-323
Cow position: chr18:6609709-6609929 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 61

Conread position: 108-323
Cow position: chr18:24508095-24508309 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 162, 26

Conread position: 109-313
Cow position: chr18:7481279-7481090 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 109-318
Cow position: chr18:4757902-4758100 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 109-323
Cow position: chr18:51392496-51392712 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 25

Conread position: 117-300
Cow position: chr18:4757436-4757620 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 64

Conread position: 118-323
Cow position: chr18:19896320-19896526 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 194, 32

Conread position: 127-262
Cow position: chr18:33607087-33606950 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 127-264
Cow position: chr18:35077375-35077236 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 127-306
Cow position: chr18:43020276-43020458 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 145

Conread position: 127-318
Cow position: chr18:25984453-25984639 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 56

Conread position: 128-323
Cow position: chr18:21102656-21102843 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 45

Conread position: 128-323
Cow position: chr18:27109170-27109365 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 20

Conread position: 128-323
Cow position: chr18:47966804-47966995 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 35

Conread position: 131-263
Cow position: chr18:52625341-52625477 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 131-305
Cow position: chr18:22214608-22214433 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 131-306
Cow position: chr18:19272978-19273152 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 131-308
Cow position: chr18:16379042-16378865 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 16

Conread position: 131-313
Cow position: chr18:39022380-39022194 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 180

Conread position: 131-323
Cow position: chr18:21266626-21266432 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 19

Conread position: 131-323
Cow position: chr18:35012193-35012389 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 184

Conread position: 132-281
Cow position: chr18:49982847-49982699 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 132-294
Cow position: chr18:44917875-44917713 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 132-317
Cow position: chr18:38757718-38757906 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 42

Conread position: 133-303
Cow position: chr18:21768729-21768566 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 135-255
Cow position: chr18:47918590-47918713 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 15

Conread position: 136-306
Cow position: chr18:12584725-12584897 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 160, 0

Conread position: 136-312
Cow position: chr18:56166092-56165920 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 10

Conread position: 136-313
Cow position: chr18:4872178-4872009 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 72

Conread position: 140-270
Cow position: chr18:42157992-42158119 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 140-313
Cow position: chr18:56190851-56191024 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 116

Conread position: 143-316
Cow position: chr18:911998-912169 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 108

Conread position: 144-318
Cow position: chr18:135551-135722 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 145-323
Cow position: chr18:30794529-30794357 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 146-311
Cow position: chr18:56044658-56044496 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 107

Conread position: 146-320
Cow position: chr18:19788088-19787909 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 147-320
Cow position: chr18:18844118-18843943 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 112, 7

Conread position: 148-266
Cow position: chr18:27637596-27637476 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 148-307
Cow position: chr18:46048854-46048695 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 148-313
Cow position: chr18:48962040-48961871 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 148-316
Cow position: chr18:47123351-47123520 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 45

Conread position: 148-317
Cow position: chr18:47705335-47705168 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 148-319
Cow position: chr18:47835928-47835755 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 88

Conread position: 148-322
Cow position: chr18:10977111-10977283 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 19

Conread position: 148-323
Cow position: chr18:14225496-14225317 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 0

Conread position: 149-291
Cow position: chr18:29080908-29080766 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 149-312
Cow position: chr18:29474844-29474682 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 150-323
Cow position: chr18:20175099-20175266 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 151-299
Cow position: chr18:50632344-50632491 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 151-310
Cow position: chr18:45985527-45985683 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 151-320
Cow position: chr18:9066800-9066627 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 18

Conread position: 152-305
Cow position: chr18:4203832-4203983 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 153-260
Cow position: chr18:3062430-3062318 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 153-306
Cow position: chr18:19646270-19646119 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 153-313
Cow position: chr18:4649658-4649498 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 153-313
Cow position: chr18:21782787-21782628 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 92

Conread position: 153-315
Cow position: chr18:24759559-24759720 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 153-321
Cow position: chr18:9974232-9974399 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 153-321
Cow position: chr18:49038559-49038391 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 154-308
Cow position: chr18:49655782-49655626 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 49

Conread position: 154-316
Cow position: chr18:55000646-55000807 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 154-321
Cow position: chr18:16997350-16997183 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 154-322
Cow position: chr18:51691367-51691534 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 154-323
Cow position: chr18:19883629-19883458 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 144
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 15

Conread position: 155-277
Cow position: chr18:53962333-53962453 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 155-305
Cow position: chr18:19295975-19295833 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 27

Conread position: 155-306
Cow position: chr18:28657814-28657967 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 155-306
Cow position: chr18:51192645-51192796 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 155-312
Cow position: chr18:24719408-24719251 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 155-316
Cow position: chr18:56159556-56159396 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 155-323
Cow position: chr18:5766508-5766341 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 95

Conread position: 155-323
Cow position: chr18:20174036-20174200 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 157-283
Cow position: chr18:49197510-49197387 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 157-293
Cow position: chr18:9846319-9846453 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 157-306
Cow position: chr18:28923754-28923903 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 157-314
Cow position: chr18:5072317-5072474 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 157-319
Cow position: chr18:50359425-50359263 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 157-323
Cow position: chr18:48242285-48242118 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 108

Conread position: 157-323
Cow position: chr18:51655948-51656115 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 158-299
Cow position: chr18:47410635-47410494 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 158-304
Cow position: chr18:7359837-7359691 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 158-312
Cow position: chr18:22170710-22170555 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 148, 0

Conread position: 158-318
Cow position: chr18:25282463-25282623 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 156, 21

Conread position: 158-323
Cow position: chr18:4624058-4624219 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 159-268
Cow position: chr18:33492451-33492342 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 159-305
Cow position: chr18:47565913-47565772 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 159-306
Cow position: chr18:32883396-32883251 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 59

Conread position: 159-306
Cow position: chr18:55015457-55015312 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 160-310
Cow position: chr18:10322895-10322746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 161-318
Cow position: chr18:18649608-18649756 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 161-318
Cow position: chr18:19849671-19849820 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 161-323
Cow position: chr18:30586136-30586293 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 162-284
Cow position: chr18:47872129-47872007 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 69

Conread position: 162-323
Cow position: chr18:56171926-56172082 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 164-277
Cow position: chr18:28297782-28297889 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 164-290
Cow position: chr18:19158236-19158364 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 164-311
Cow position: chr18:48828689-48828835 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 85

Conread position: 164-316
Cow position: chr18:51850478-51850623 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 164-321
Cow position: chr18:31711476-31711635 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 22

Conread position: 165-315
Cow position: chr18:33299989-33299840 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 165-320
Cow position: chr18:1732790-1732936 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 166-319
Cow position: chr18:24976973-24977129 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 144

Conread position: 170-281
Cow position: chr18:28189641-28189754 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 170-309
Cow position: chr18:15301221-15301083 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 9

Conread position: 172-323
Cow position: chr18:381009-380858 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 145, 7

Conread position: 173-306
Cow position: chr18:9900839-9900701 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 173-306
Cow position: chr18:11377441-11377309 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 59

Conread position: 173-317
Cow position: chr18:47693143-47693000 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 173-318
Cow position: chr18:52634993-52635138 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 173-323
Cow position: chr18:52855132-52854979 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 173-323
Cow position: chr18:56301969-56301819 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 71

Conread position: 174-318
Cow position: chr18:44801813-44801957 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 175-312
Cow position: chr18:36746184-36746321 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-306
Cow position: chr18:2549232-2549359 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 179-311
Cow position: chr18:14586399-14586531 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 179-312
Cow position: chr18:5711582-5711712 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 179-321
Cow position: chr18:40036063-40035925 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 179-323
Cow position: chr18:11685053-11684909 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 179-323
Cow position: chr18:44028001-44028139 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 181-312
Cow position: chr18:1607318-1607192 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 181-323
Cow position: chr18:2863921-2864066 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 183-323
Cow position: chr18:4182121-4182260 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 184-315
Cow position: chr18:23476621-23476750 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 185-320
Cow position: chr18:29796363-29796499 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 189-313
Cow position: chr18:49659822-49659945 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 60

Conread position: 190-313
Cow position: chr18:13360114-13359992 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 191-302
Cow position: chr18:25018307-25018418 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 192-320
Cow position: chr18:33508615-33508740 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 55

Show alignments to all cow chromosomes.