Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig1-9K17
        

               Conread position:
               11-277
               

               Cow position:
               chr9:151634-151891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 125
               

               Conread position:
               44-279
               

               Cow position:
               chr9:31344806-31344582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               47-276
               

               Cow position:
               chr9:1884339-1884108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 111
               

               Conread position:
               48-264
               

               Cow position:
               chr9:40221379-40221176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               48-306
               

               Cow position:
               chr9:20815668-20815917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               53-320
               

               Cow position:
               chr9:33219147-33218887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               55-308
               

               Cow position:
               chr9:34484400-34484649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               55-323
               

               Cow position:
               chr9:60080707-60080974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               56-323
               

               Cow position:
               chr9:18253103-18252851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               265, 17
               

               Conread position:
               57-323
               

               Cow position:
               chr9:27279121-27279377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               58-308
               

               Cow position:
               chr9:38792829-38793070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               58-323
               

               Cow position:
               chr9:33822935-33823189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               251, 23
               

               Conread position:
               59-303
               

               Cow position:
               chr9:44822506-44822275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               59-306
               

               Cow position:
               chr9:14738068-14738301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               59-315
               

               Cow position:
               chr9:32670133-32669886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               59-322
               

               Cow position:
               chr9:13169849-13169595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               60-288
               

               Cow position:
               chr9:35306532-35306312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               60-323
               

               Cow position:
               chr9:5110673-5110926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               61-243
               

               Cow position:
               chr9:13141346-13141527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               61-244
               

               Cow position:
               chr9:53323969-53323794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               61-278
               

               Cow position:
               chr9:1878730-1878947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               61-312
               

               Cow position:
               chr9:9724058-9723823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               61-319
               

               Cow position:
               chr9:6934268-6934009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               62-243
               

               Cow position:
               chr9:1984665-1984491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               62-260
               

               Cow position:
               chr9:61019546-61019356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               62-262
               

               Cow position:
               chr9:29824835-29825037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               62-264
               

               Cow position:
               chr9:1403718-1403526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               62-264
               

               Cow position:
               chr9:17785751-17785556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               62-266
               

               Cow position:
               chr9:28315242-28315441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               62-270
               

               Cow position:
               chr9:32662217-32662015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               62-272
               

               Cow position:
               chr9:8645084-8645285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               62-281
               

               Cow position:
               chr9:46344749-46344963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               62-283
               

               Cow position:
               chr9:5068656-5068870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               62-283
               

               Cow position:
               chr9:51011982-51011764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               62-287
               

               Cow position:
               chr9:35466711-35466489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               62-290
               

               Cow position:
               chr9:60395231-60395012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               62-300
               

               Cow position:
               chr9:34423439-34423668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               62-304
               

               Cow position:
               chr9:23541583-23541346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               62-305
               

               Cow position:
               chr9:35028349-35028113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               62-306
               

               Cow position:
               chr9:28747701-28747468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               62-306
               

               Cow position:
               chr9:56827284-56827533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               62-312
               

               Cow position:
               chr9:11123661-11123427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               62-312
               

               Cow position:
               chr9:28156519-28156752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               62-312
               

               Cow position:
               chr9:52130831-52131069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               62-313
               

               Cow position:
               chr9:8901407-8901168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               62-313
               

               Cow position:
               chr9:28392228-28391966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               62-313
               

               Cow position:
               chr9:39011650-39011410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               62-314
               

               Cow position:
               chr9:40215066-40215303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               62-315
               

               Cow position:
               chr9:55084517-55084242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               17, 189
               

               Conread position:
               62-316
               

               Cow position:
               chr9:13744115-13743867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               62-318
               

               Cow position:
               chr9:9654510-9654250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 196
               

               Conread position:
               62-318
               

               Cow position:
               chr9:34697483-34697236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               62-318
               

               Cow position:
               chr9:52267943-52267694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               62-320
               

               Cow position:
               chr9:8834312-8834067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               62-321
               

               Cow position:
               chr9:12786660-12786406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               62-323
               

               Cow position:
               chr9:1370754-1370996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               62-323
               

               Cow position:
               chr9:4629931-4630172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               62-323
               

               Cow position:
               chr9:11304271-11304012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               62-323
               

               Cow position:
               chr9:50977437-50977175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               62-323
               

               Cow position:
               chr9:51566679-51566426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               62-323
               

               Cow position:
               chr9:52510934-52511183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               63-266
               

               Cow position:
               chr9:36634329-36634519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               63-270
               

               Cow position:
               chr9:5772855-5772661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               63-280
               

               Cow position:
               chr9:9557501-9557712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               63-306
               

               Cow position:
               chr9:9753579-9753339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               63-306
               

               Cow position:
               chr9:40005297-40005526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               63-307
               

               Cow position:
               chr9:28295100-28295343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               63-311
               

               Cow position:
               chr9:54677076-54677314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               63-317
               

               Cow position:
               chr9:6839804-6840058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               63-318
               

               Cow position:
               chr9:8562626-8562885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               71, 19
               

               Conread position:
               63-318
               

               Cow position:
               chr9:34286616-34286863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               63-320
               

               Cow position:
               chr9:49709665-49709912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               63-320
               

               Cow position:
               chr9:56032497-56032248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               63-323
               

               Cow position:
               chr9:25583651-25583898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               63-323
               

               Cow position:
               chr9:26102550-26102792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               63-323
               

               Cow position:
               chr9:26279353-26279101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               63-323
               

               Cow position:
               chr9:28726904-28726653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               64-227
               

               Cow position:
               chr9:4991319-4991156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               64-242
               

               Cow position:
               chr9:34910258-34910073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               64-250
               

               Cow position:
               chr9:54086189-54086019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-260
               

               Cow position:
               chr9:55013520-55013326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               64-263
               

               Cow position:
               chr9:31694217-31694023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               64-264
               

               Cow position:
               chr9:9091286-9091095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               64-267
               

               Cow position:
               chr9:33681467-33681672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               64-278
               

               Cow position:
               chr9:44467550-44467315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 192
               

               Conread position:
               64-283
               

               Cow position:
               chr9:41470280-41470069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               64-294
               

               Cow position:
               chr9:55354414-55354651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               64-297
               

               Cow position:
               chr9:36457817-36458044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               64-302
               

               Cow position:
               chr9:35832794-35832571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               64-304
               

               Cow position:
               chr9:9243369-9243589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               64-305
               

               Cow position:
               chr9:7859814-7859586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               64-306
               

               Cow position:
               chr9:7362824-7363076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               23, 196
               

               Conread position:
               64-312
               

               Cow position:
               chr9:39709673-39709915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               64-320
               

               Cow position:
               chr9:16300752-16300504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               64-323
               

               Cow position:
               chr9:6954431-6954179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               64-323
               

               Cow position:
               chr9:8723620-8723863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               253, 16
               

               Conread position:
               64-323
               

               Cow position:
               chr9:17518702-17518421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 267
               

               Conread position:
               64-323
               

               Cow position:
               chr9:45285721-45285466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               65-269
               

               Cow position:
               chr9:8016693-8016887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               65-276
               

               Cow position:
               chr9:20828726-20828926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               65-286
               

               Cow position:
               chr9:63134211-63134423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               65-301
               

               Cow position:
               chr9:44526931-44527153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               65-302
               

               Cow position:
               chr9:41644931-41644702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               65-306
               

               Cow position:
               chr9:33597795-33598038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               65-313
               

               Cow position:
               chr9:34283778-34284013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               234, 25
               

               Conread position:
               65-313
               

               Cow position:
               chr9:56065391-56065616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               240, 17
               

               Conread position:
               65-320
               

               Cow position:
               chr9:52513639-52513384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               65-323
               

               Cow position:
               chr9:9311681-9311928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               65-323
               

               Cow position:
               chr9:15806104-15805852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               65-323
               

               Cow position:
               chr9:17277070-17276820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               65-323
               

               Cow position:
               chr9:26477034-26477283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               66-254
               

               Cow position:
               chr9:34760543-34760364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               66-305
               

               Cow position:
               chr9:29984284-29984515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               66-306
               

               Cow position:
               chr9:14975108-14974867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               66-311
               

               Cow position:
               chr9:37016724-37016948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               67-305
               

               Cow position:
               chr9:16216801-16217026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               67-313
               

               Cow position:
               chr9:15389403-15389165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               67-313
               

               Cow position:
               chr9:47214724-47214486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               68-272
               

               Cow position:
               chr9:40984329-40984523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               68-285
               

               Cow position:
               chr9:30665175-30664957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               68-322
               

               Cow position:
               chr9:33940422-33940671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               69-264
               

               Cow position:
               chr9:8535683-8535877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               69-270
               

               Cow position:
               chr9:34811281-34811492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               69-302
               

               Cow position:
               chr9:27345763-27345536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               69-306
               

               Cow position:
               chr9:44396485-44396713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               69-306
               

               Cow position:
               chr9:52755026-52754803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               69-312
               

               Cow position:
               chr9:1729861-1729616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               69-323
               

               Cow position:
               chr9:47517023-47517266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               70-281
               

               Cow position:
               chr9:40603494-40603695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               70-306
               

               Cow position:
               chr9:37934412-37934184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               70-315
               

               Cow position:
               chr9:34344436-34344671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               70-323
               

               Cow position:
               chr9:34410566-34410328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               71-275
               

               Cow position:
               chr9:53496935-53496733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 87
               

               Conread position:
               71-304
               

               Cow position:
               chr9:4263260-4263046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               71-314
               

               Cow position:
               chr9:45749263-45749501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               71-320
               

               Cow position:
               chr9:20942792-20942548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 66
               

               Conread position:
               71-323
               

               Cow position:
               chr9:15215862-15215618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               72-254
               

               Cow position:
               chr9:34264912-34265095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               72-278
               

               Cow position:
               chr9:12773523-12773714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               72-286
               

               Cow position:
               chr9:24443391-24443600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               72-323
               

               Cow position:
               chr9:9686589-9686345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               72-323
               

               Cow position:
               chr9:38941608-38941364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               73-236
               

               Cow position:
               chr9:46370152-46369984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               73-254
               

               Cow position:
               chr9:23840575-23840394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               73-272
               

               Cow position:
               chr9:53061483-53061680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               73-288
               

               Cow position:
               chr9:18226920-18226701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               73-290
               

               Cow position:
               chr9:52807591-52807369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               73-294
               

               Cow position:
               chr9:24887035-24887246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               73-297
               

               Cow position:
               chr9:34375097-34374881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               73-306
               

               Cow position:
               chr9:36843616-36843849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               188, 9
               

               Conread position:
               73-308
               

               Cow position:
               chr9:42586731-42586502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               73-315
               

               Cow position:
               chr9:4341326-4341098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               73-315
               

               Cow position:
               chr9:5104580-5104342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               73-318
               

               Cow position:
               chr9:13670466-13670700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               73-319
               

               Cow position:
               chr9:34279229-34278995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               73-320
               

               Cow position:
               chr9:50310933-50310700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               73-321
               

               Cow position:
               chr9:37198960-37199193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               73-322
               

               Cow position:
               chr9:3356927-3356685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               73-323
               

               Cow position:
               chr9:1751159-1751405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               73-323
               

               Cow position:
               chr9:12337730-12337970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               73-323
               

               Cow position:
               chr9:31557899-31557659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               73-323
               

               Cow position:
               chr9:33114169-33114414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               73-323
               

               Cow position:
               chr9:34024529-34024770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               73-323
               

               Cow position:
               chr9:39681131-39681408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               74-263
               

               Cow position:
               chr9:3198366-3198178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               74-264
               

               Cow position:
               chr9:14357246-14357425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               74-318
               

               Cow position:
               chr9:52840070-52839819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               74-319
               

               Cow position:
               chr9:62668048-62668314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               74-320
               

               Cow position:
               chr9:5342415-5342181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               74-323
               

               Cow position:
               chr9:54716784-54716540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               76-264
               

               Cow position:
               chr9:58440542-58440358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               76-310
               

               Cow position:
               chr9:18217290-18217042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               77-285
               

               Cow position:
               chr9:11427478-11427694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               77-285
               

               Cow position:
               chr9:23632828-23632620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               77-315
               

               Cow position:
               chr9:4268169-4267921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               77-323
               

               Cow position:
               chr9:54664682-54664919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               77-323
               

               Cow position:
               chr9:55117916-55118153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               78-312
               

               Cow position:
               chr9:29006397-29006615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               81-278
               

               Cow position:
               chr9:34362576-34362760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               81-280
               

               Cow position:
               chr9:3847235-3847428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               159
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               81-289
               

               Cow position:
               chr9:52000836-52001052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 136
               

               Conread position:
               81-321
               

               Cow position:
               chr9:32307394-32307165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               225, 50
               

               Conread position:
               81-323
               

               Cow position:
               chr9:12226145-12225909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               82-301
               

               Cow position:
               chr9:53123927-53124135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               82-312
               

               Cow position:
               chr9:22408598-22408815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               151, 52
               

               Conread position:
               82-312
               

               Cow position:
               chr9:30402588-30402368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               83-276
               

               Cow position:
               chr9:48282036-48282224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               84-276
               

               Cow position:
               chr9:13993606-13993787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               84-278
               

               Cow position:
               chr9:34707467-34707288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               84-280
               

               Cow position:
               chr9:27698051-27697850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 128
               

               Conread position:
               84-286
               

               Cow position:
               chr9:37955331-37955139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               84-287
               

               Cow position:
               chr9:7101277-7101475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               84-297
               

               Cow position:
               chr9:22165874-22165670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               84-315
               

               Cow position:
               chr9:10010655-10010870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               84-316
               

               Cow position:
               chr9:32955851-32955623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               84-320
               

               Cow position:
               chr9:38645506-38645280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               84-320
               

               Cow position:
               chr9:50202397-50202641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 47
               

               Conread position:
               84-323
               

               Cow position:
               chr9:26085900-26086124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               146, 37
               

               Conread position:
               85-318
               

               Cow position:
               chr9:24652243-24652468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               86-312
               

               Cow position:
               chr9:20755914-20755702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               87-284
               

               Cow position:
               chr9:35932968-35932782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               165, 44
               

               Conread position:
               87-306
               

               Cow position:
               chr9:29195186-29194972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               87-306
               

               Cow position:
               chr9:38846495-38846285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               87-313
               

               Cow position:
               chr9:31514089-31513880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               87-315
               

               Cow position:
               chr9:41282858-41283075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               87-317
               

               Cow position:
               chr9:29185294-29185074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               87-318
               

               Cow position:
               chr9:18216066-18215845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               225, 47
               

               Conread position:
               87-319
               

               Cow position:
               chr9:56772907-56773146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               87-321
               

               Cow position:
               chr9:55288043-55287826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               87-323
               

               Cow position:
               chr9:42061939-42062171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               89-253
               

               Cow position:
               chr9:42482751-42482908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 65
               

               Conread position:
               90-294
               

               Cow position:
               chr9:20637224-20637413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               90-318
               

               Cow position:
               chr9:61738770-61738985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               90-323
               

               Cow position:
               chr9:5164136-5163917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               91-301
               

               Cow position:
               chr9:34014420-34014202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               91-318
               

               Cow position:
               chr9:55495139-55494924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               92-264
               

               Cow position:
               chr9:42998719-42998535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 165
               

               Conread position:
               92-272
               

               Cow position:
               chr9:31345328-31345518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               94-323
               

               Cow position:
               chr9:33541905-33542125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               150, 37
               

               Conread position:
               101-321
               

               Cow position:
               chr9:20416654-20416443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               107-263
               

               Cow position:
               chr9:14597388-14597229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               107-305
               

               Cow position:
               chr9:38624761-38624573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               107-311
               

               Cow position:
               chr9:47906424-47906224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               107-318
               

               Cow position:
               chr9:5836011-5836221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               140, 27
               

               Conread position:
               107-323
               

               Cow position:
               chr9:1520898-1520670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               25, 217
               

               Conread position:
               107-323
               

               Cow position:
               chr9:26310349-26310575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               108-283
               

               Cow position:
               chr9:6118573-6118409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               108-284
               

               Cow position:
               chr9:54611461-54611283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               108-292
               

               Cow position:
               chr9:32089250-32089427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 22
               

               Conread position:
               108-300
               

               Cow position:
               chr9:24243873-24243675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               108-313
               

               Cow position:
               chr9:5509584-5509783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               108-320
               

               Cow position:
               chr9:42446128-42445916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               108-323
               

               Cow position:
               chr9:9443744-9443536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               108-323
               

               Cow position:
               chr9:41394783-41394580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               109-311
               

               Cow position:
               chr9:19758573-19758776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 181
               

               Conread position:
               113-300
               

               Cow position:
               chr9:36849848-36850043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 166
               

               Conread position:
               115-310
               

               Cow position:
               chr9:54051634-54051830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               116-323
               

               Cow position:
               chr9:22696084-22696291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               123-306
               

               Cow position:
               chr9:10878020-10877842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               124-302
               

               Cow position:
               chr9:44915233-44915050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 129
               

               Conread position:
               127-323
               

               Cow position:
               chr9:45171353-45171151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               128-294
               

               Cow position:
               chr9:6293471-6293635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               131-267
               

               Cow position:
               chr9:46190020-46190155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               131-305
               

               Cow position:
               chr9:25627962-25628135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               131-306
               

               Cow position:
               chr9:11313636-11313458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               131-313
               

               Cow position:
               chr9:17411313-17411134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-316
               

               Cow position:
               chr9:31814508-31814323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               131-316
               

               Cow position:
               chr9:59386893-59386706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               131-323
               

               Cow position:
               chr9:10819951-10819764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               131-323
               

               Cow position:
               chr9:17310684-17310496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               131-323
               

               Cow position:
               chr9:32982199-32982004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 182
               

               Conread position:
               131-323
               

               Cow position:
               chr9:50543551-50543356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               132-306
               

               Cow position:
               chr9:5072956-5072786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               132-306
               

               Cow position:
               chr9:55532688-55532866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               133-322
               

               Cow position:
               chr9:55889691-55889877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               135-274
               

               Cow position:
               chr9:50540817-50540682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               135-280
               

               Cow position:
               chr9:26277711-26277854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               135-323
               

               Cow position:
               chr9:11319754-11319565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               135-323
               

               Cow position:
               chr9:33092835-33093020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               136-273
               

               Cow position:
               chr9:45454955-45455094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               136-309
               

               Cow position:
               chr9:10309115-10308945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               137-264
               

               Cow position:
               chr9:9088489-9088613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               139-267
               

               Cow position:
               chr9:41716328-41716454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               139-280
               

               Cow position:
               chr9:61981404-61981545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               139-313
               

               Cow position:
               chr9:36445508-36445680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               168, 11
               

               Conread position:
               139-317
               

               Cow position:
               chr9:39315739-39315910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               139-320
               

               Cow position:
               chr9:26859240-26859414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               139-322
               

               Cow position:
               chr9:52258177-52257999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               140-320
               

               Cow position:
               chr9:50081155-50080975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               10, 171
               

               Conread position:
               142-323
               

               Cow position:
               chr9:8288505-8288684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               143-318
               

               Cow position:
               chr9:64064474-64064302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               145-306
               

               Cow position:
               chr9:904403-904250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               145-313
               

               Cow position:
               chr9:34888402-34888238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               152, 10
               

               Conread position:
               146-323
               

               Cow position:
               chr9:6596337-6596166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               170, 10
               

               Conread position:
               147-308
               

               Cow position:
               chr9:3379038-3379193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               147-322
               

               Cow position:
               chr9:17741047-17740874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               169, 20
               

               Conread position:
               147-322
               

               Cow position:
               chr9:41781549-41781721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               147-323
               

               Cow position:
               chr9:5327151-5327325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               147-323
               

               Cow position:
               chr9:5650080-5649904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               148-272
               

               Cow position:
               chr9:52998485-52998362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               148-294
               

               Cow position:
               chr9:34958161-34958016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               148-304
               

               Cow position:
               chr9:16811762-16811604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               148-313
               

               Cow position:
               chr9:31772181-31772019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               157, 25
               

               Conread position:
               148-320
               

               Cow position:
               chr9:9551985-9552155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               148-322
               

               Cow position:
               chr9:41728155-41728325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               149-300
               

               Cow position:
               chr9:16137445-16137296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               149-323
               

               Cow position:
               chr9:35105895-35105722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               150-280
               

               Cow position:
               chr9:1909720-1909588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               150-316
               

               Cow position:
               chr9:18828156-18827992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               150-319
               

               Cow position:
               chr9:52598824-52598655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               156, 7
               

               Conread position:
               150-320
               

               Cow position:
               chr9:623251-623418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               151-306
               

               Cow position:
               chr9:22443727-22443575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               151-312
               

               Cow position:
               chr9:22434031-22433871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               151-316
               

               Cow position:
               chr9:64050664-64050501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               151-320
               

               Cow position:
               chr9:29339417-29339259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 96
               

               Conread position:
               152-283
               

               Cow position:
               chr9:34135615-34135745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               153-278
               

               Cow position:
               chr9:36401764-36401641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               153-280
               

               Cow position:
               chr9:35295589-35295716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               153-281
               

               Cow position:
               chr9:59586211-59586338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               153-302
               

               Cow position:
               chr9:3353261-3353403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               153-302
               

               Cow position:
               chr9:11030088-11030232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               153-303
               

               Cow position:
               chr9:8767519-8767367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               153-305
               

               Cow position:
               chr9:4646426-4646274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               153-306
               

               Cow position:
               chr9:9199880-9199728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               153-306
               

               Cow position:
               chr9:50139184-50139339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               153-306
               

               Cow position:
               chr9:54528412-54528564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               153-311
               

               Cow position:
               chr9:8998250-8998406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               153-313
               

               Cow position:
               chr9:58369097-58368938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               153-314
               

               Cow position:
               chr9:9596052-9595890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               153-314
               

               Cow position:
               chr9:64559983-64559823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               153-315
               

               Cow position:
               chr9:30477876-30477715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               153-315
               

               Cow position:
               chr9:31346847-31347011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               153-315
               

               Cow position:
               chr9:41964837-41964673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               153-317
               

               Cow position:
               chr9:8992283-8992117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               153-318
               

               Cow position:
               chr9:23956081-23955917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               153-319
               

               Cow position:
               chr9:33584786-33584621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               153-322
               

               Cow position:
               chr9:56011399-56011567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               153-322
               

               Cow position:
               chr9:64105801-64105967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               153-323
               

               Cow position:
               chr9:31079180-31079013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               153-323
               

               Cow position:
               chr9:43342230-43342399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               154, 132
               

               Conread position:
               154-277
               

               Cow position:
               chr9:3468547-3468671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               154-281
               

               Cow position:
               chr9:2951606-2951478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               154-302
               

               Cow position:
               chr9:5245754-5245903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               154-306
               

               Cow position:
               chr9:15225398-15225244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               154-323
               

               Cow position:
               chr9:8337925-8338097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               155-292
               

               Cow position:
               chr9:62631771-62631633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               155-304
               

               Cow position:
               chr9:22152186-22152036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               155-313
               

               Cow position:
               chr9:63785014-63784855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               155-317
               

               Cow position:
               chr9:7409665-7409829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 18
               

               Conread position:
               155-319
               

               Cow position:
               chr9:23970996-23970830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               155-323
               

               Cow position:
               chr9:20579692-20579534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 16
               

               Conread position:
               155-323
               

               Cow position:
               chr9:28354418-28354588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               156-262
               

               Cow position:
               chr9:32710552-32710660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               156-313
               

               Cow position:
               chr9:5594406-5594562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               156-323
               

               Cow position:
               chr9:12280874-12281039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               156-323
               

               Cow position:
               chr9:23797139-23797305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               157-276
               

               Cow position:
               chr9:18003287-18003169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               157-294
               

               Cow position:
               chr9:33119985-33119848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-306
               

               Cow position:
               chr9:7806058-7805909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               129
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-306
               

               Cow position:
               chr9:11168632-11168782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               157-306
               

               Cow position:
               chr9:29819622-29819770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               157-315
               

               Cow position:
               chr9:5665967-5666127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               159-270
               

               Cow position:
               chr9:32773118-32773229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               159-279
               

               Cow position:
               chr9:34917281-34917162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               159-313
               

               Cow position:
               chr9:54681416-54681566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               159-320
               

               Cow position:
               chr9:48016885-48017046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 152
               

               Conread position:
               159-323
               

               Cow position:
               chr9:17799531-17799697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               159-323
               

               Cow position:
               chr9:19493561-19493397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-305
               

               Cow position:
               chr9:44584498-44584644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               160-318
               

               Cow position:
               chr9:55321542-55321701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               161-277
               

               Cow position:
               chr9:52648950-52648835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               161-304
               

               Cow position:
               chr9:13742430-13742573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-305
               

               Cow position:
               chr9:39135724-39135577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               161-319
               

               Cow position:
               chr9:25400292-25400138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               162-306
               

               Cow position:
               chr9:55075221-55075080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               164-299
               

               Cow position:
               chr9:60355303-60355167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               164-306
               

               Cow position:
               chr9:43443714-43443853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 84
               

               Conread position:
               164-313
               

               Cow position:
               chr9:51720987-51720842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               164-316
               

               Cow position:
               chr9:5433542-5433696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               164-320
               

               Cow position:
               chr9:4580494-4580339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               165-300
               

               Cow position:
               chr9:5757080-5756942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               165-312
               

               Cow position:
               chr9:1867359-1867508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               165-323
               

               Cow position:
               chr9:6852156-6852002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               166-320
               

               Cow position:
               chr9:24429186-24429030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               171-323
               

               Cow position:
               chr9:6879696-6879840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               141, 76
               

               Conread position:
               172-323
               

               Cow position:
               chr9:38289405-38289257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               173-295
               

               Cow position:
               chr9:35793596-35793718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-301
               

               Cow position:
               chr9:39148997-39149126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               173-306
               

               Cow position:
               chr9:13846208-13846075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               173-311
               

               Cow position:
               chr9:3343667-3343806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               173-312
               

               Cow position:
               chr9:3774083-3774219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               173-312
               

               Cow position:
               chr9:34973793-34973654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-315
               

               Cow position:
               chr9:25921741-25921884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               173-320
               

               Cow position:
               chr9:14796851-14796704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-320
               

               Cow position:
               chr9:43870894-43871041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-322
               

               Cow position:
               chr9:45756282-45756433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               173-322
               

               Cow position:
               chr9:62656722-62656870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               173-323
               

               Cow position:
               chr9:1878083-1877940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               173-323
               

               Cow position:
               chr9:19713999-19714149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               126, 121
               

               Conread position:
               173-323
               

               Cow position:
               chr9:26403703-26403851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               173-323
               

               Cow position:
               chr9:32371832-32371688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               173-323
               

               Cow position:
               chr9:63745734-63745879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-306
               

               Cow position:
               chr9:64155929-64155799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               179-294
               

               Cow position:
               chr9:29792302-29792186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               179-311
               

               Cow position:
               chr9:19903007-19903139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               179-323
               

               Cow position:
               chr9:5399060-5399205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               179-323
               

               Cow position:
               chr9:24872761-24872903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               179-323
               

               Cow position:
               chr9:60027122-60027269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               180-323
               

               Cow position:
               chr9:41679673-41679814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               181-312
               

               Cow position:
               chr9:49416914-49417045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               181-317
               

               Cow position:
               chr9:3220063-3220197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               182-314
               

               Cow position:
               chr9:33347562-33347430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-318
               

               Cow position:
               chr9:29684074-29684208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 93
               

               Conread position:
               184-321
               

               Cow position:
               chr9:13761029-13761166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               185-313
               

               Cow position:
               chr9:40776729-40776857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 109
               

               Conread position:
               191-323
               

               Cow position:
               chr9:5209517-5209648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               196-320
               

               Cow position:
               chr9:43936887-43937010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               112, 0
               
Show alignments to all cow chromosomes.
Conread position:	11-277
Cow position:	chr9:151634-151891 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	153
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	76, 125
Conread position:	44-279
Cow position:	chr9:31344806-31344582 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	173
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	38, 9
Conread position:	47-276
Cow position:	chr9:1884339-1884108 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	171
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	33, 111
Conread position:	48-264
Cow position:	chr9:40221379-40221176 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	158
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	39, 84
Conread position:	48-306
Cow position:	chr9:20815668-20815917 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	181
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	26, 91
Conread position:	53-320
Cow position:	chr9:33219147-33218887 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	194
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	15, 80
Conread position:	55-308
Cow position:	chr9:34484400-34484649 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	201
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 83
Conread position:	55-323
Cow position:	chr9:60080707-60080974 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	186
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	31, 17
Conread position:	56-323
Cow position:	chr9:18253103-18252851 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	186
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	265, 17
Conread position:	57-323
Cow position:	chr9:27279121-27279377 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	191
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	25, 16
Conread position:	58-308
Cow position:	chr9:38792829-38793070 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	181
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	18, 74
Conread position:	58-323
Cow position:	chr9:33822935-33823189 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	180
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	251, 23
Conread position:	59-303
Cow position:	chr9:44822506-44822275 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	178
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	29, 77
Conread position:	59-306
Cow position:	chr9:14738068-14738301 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	180
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	23, 81
Conread position:	59-315
Cow position:	chr9:32670133-32669886 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	186
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	13, 51
Conread position:	59-322
Cow position:	chr9:13169849-13169595 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	180
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	28, 77
Conread position:	60-288
Cow position:	chr9:35306532-35306312 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	167
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	27, 49
Conread position:	60-323
Cow position:	chr9:5110673-5110926 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	193
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	23, 76
Conread position:	61-243
Cow position:	chr9:13141346-13141527 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	142
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	26, 83
Conread position:	61-244
Cow position:	chr9:53323969-53323794 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	137
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	26, 75