Cow genome map
| Conread name: | Pig2-102D19 |
| Conread position: | 1-434 |
| Cow position: | chr11:68571148-68570719 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 76 |
| Conread position: | 1-451 |
| Cow position: | chr11:40251083-40250624 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 1-493 |
| Cow position: | chr11:43361266-43360773 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 200, 77 |
| Conread position: | 2-337 |
| Cow position: | chr11:6084561-6084253 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 2-431 |
| Cow position: | chr11:65694321-65693894 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 2-502 |
| Cow position: | chr11:42232122-42232620 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 2-504 |
| Cow position: | chr11:59366559-59366057 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 12 |
| Conread position: | 2-506 |
| Cow position: | chr11:43644584-43644084 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 2-506 |
| Cow position: | chr11:67744856-67745341 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 2-508 |
| Cow position: | chr11:47193048-47193537 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 2-508 |
| Cow position: | chr11:65987740-65988246 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 14 |
| Conread position: | 7-502 |
| Cow position: | chr11:14649759-14649298 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 320 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 251, 69 |
| Conread position: | 7-514 |
| Cow position: | chr11:34112785-34113288 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 245 |
| Conread position: | 7-515 |
| Cow position: | chr11:18067317-18066803 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 8-423 |
| Cow position: | chr11:34412630-34413034 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 68 |
| Conread position: | 8-427 |
| Cow position: | chr11:35363026-35363438 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 48 |
| Conread position: | 8-437 |
| Cow position: | chr11:74929310-74929733 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 63 |
| Conread position: | 8-438 |
| Cow position: | chr11:47169465-47169054 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 110 |
| Conread position: | 8-460 |
| Cow position: | chr11:8233037-8232597 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 8-473 |
| Cow position: | chr11:38794072-38794534 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 26 |
| Conread position: | 8-502 |
| Cow position: | chr11:10076305-10076784 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 45 |
| Conread position: | 8-502 |
| Cow position: | chr11:77745733-77745236 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 179, 68 |
| Conread position: | 8-506 |
| Cow position: | chr11:63157378-63156898 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 130 |
| Conread position: | 8-508 |
| Cow position: | chr11:63847393-63847868 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 110 |
| Conread position: | 8-515 |
| Cow position: | chr11:8339874-8339382 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 9-449 |
| Cow position: | chr11:27248027-27248454 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 71 |
| Conread position: | 10-451 |
| Cow position: | chr11:40819110-40818674 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 73 |
| Conread position: | 10-506 |
| Cow position: | chr11:63507966-63508434 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 86 |
| Conread position: | 12-447 |
| Cow position: | chr11:31900583-31901006 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 16-492 |
| Cow position: | chr11:23129013-23128538 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 16-509 |
| Cow position: | chr11:42358663-42359137 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 62 |
| Conread position: | 19-487 |
| Cow position: | chr11:67746823-67747282 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 60 |
| Conread position: | 24-504 |
| Cow position: | chr11:11752974-11752499 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 25-506 |
| Cow position: | chr11:47566421-47565917 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 224 |
| Conread position: | 29-469 |
| Cow position: | chr11:56797180-56796761 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 30-499 |
| Cow position: | chr11:77705317-77705771 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 46 |
| Conread position: | 41-483 |
| Cow position: | chr11:60823171-60822736 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 54-501 |
| Cow position: | chr11:23252032-23251577 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 41 |
| Conread position: | 57-430 |
| Cow position: | chr11:46474118-46473738 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 186 |
| Conread position: | 59-508 |
| Cow position: | chr11:7334139-7333702 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 41 |
| Conread position: | 60-468 |
| Cow position: | chr11:15125385-15124999 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 132 |
| Conread position: | 67-506 |
| Cow position: | chr11:27681086-27681521 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 71-498 |
| Cow position: | chr11:66265211-66265609 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 40 |
| Conread position: | 76-445 |
| Cow position: | chr11:55744066-55744428 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 161 |
| Conread position: | 77-487 |
| Cow position: | chr11:65970045-65970457 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 162 |
| Conread position: | 77-502 |
| Cow position: | chr11:59872520-59872946 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 159 |
| Conread position: | 78-437 |
| Cow position: | chr11:85764554-85764888 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 137, 92 |
| Conread position: | 79-502 |
| Cow position: | chr11:48672304-48672728 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 158 |
| Conread position: | 80-503 |
| Cow position: | chr11:40486325-40485918 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 110 |
| Conread position: | 89-450 |
| Cow position: | chr11:80923729-80923360 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 91-498 |
| Cow position: | chr11:19238549-19238144 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 149 |
| Conread position: | 96-439 |
| Cow position: | chr11:49105667-49106009 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 104-443 |
| Cow position: | chr11:57047342-57047015 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 133 |
| Conread position: | 120-440 |
| Cow position: | chr11:35684860-35684543 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 132-495 |
| Cow position: | chr11:53130464-53130822 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 126, 102 |
| Conread position: | 133-435 |
| Cow position: | chr11:9253377-9253070 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 143-498 |
| Cow position: | chr11:53452681-53452333 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 144-462 |
| Cow position: | chr11:46398783-46399098 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 149-506 |
| Cow position: | chr11:28692084-28691734 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 152-451 |
| Cow position: | chr11:439990-439701 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 154-437 |
| Cow position: | chr11:43913893-43914163 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 154-503 |
| Cow position: | chr11:41271815-41272154 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 170-502 |
| Cow position: | chr11:65159752-65159437 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 171-462 |
| Cow position: | chr11:6835218-6835505 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 172-451 |
| Cow position: | chr11:46001993-46001708 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 172-495 |
| Cow position: | chr11:34962751-34963077 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 174-439 |
| Cow position: | chr11:46770764-46770505 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 174-503 |
| Cow position: | chr11:62019910-62019567 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 175-434 |
| Cow position: | chr11:32609686-32609949 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 175-467 |
| Cow position: | chr11:53262462-53262758 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 182-440 |
| Cow position: | chr11:64845347-64845602 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 185-439 |
| Cow position: | chr11:32800035-32800288 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 186-502 |
| Cow position: | chr11:87155215-87155535 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 189-475 |
| Cow position: | chr11:11460206-11460482 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 199-503 |
| Cow position: | chr11:38845544-38845245 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 200-449 |
| Cow position: | chr11:57111588-57111345 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-450 |
| Cow position: | chr11:70399580-70399823 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 200-502 |
| Cow position: | chr11:74316426-74316725 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-503 |
| Cow position: | chr11:77682899-77683186 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 264, 33 |
| Conread position: | 200-516 |
| Cow position: | chr11:48932863-48932559 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 201-506 |
| Cow position: | chr11:50951271-50951577 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 204-419 |
| Cow position: | chr11:2281563-2281359 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 204-506 |
| Cow position: | chr11:37160514-37160809 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 205-439 |
| Cow position: | chr11:13039405-13039192 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 205-446 |
| Cow position: | chr11:80012107-80011881 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 205-447 |
| Cow position: | chr11:17964229-17963993 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 205-450 |
| Cow position: | chr11:45646866-45646632 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 205-460 |
| Cow position: | chr11:30110696-30110932 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 205-468 |
| Cow position: | chr11:44856099-44855862 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 205-492 |
| Cow position: | chr11:8148167-8147895 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 205-498 |
| Cow position: | chr11:8828904-8828616 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 205-498 |
| Cow position: | chr11:25332004-25331729 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 246, 29 |
| Conread position: | 205-498 |
| Cow position: | chr11:48650519-48650806 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 205-499 |
| Cow position: | chr11:46705798-46705524 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-502 |
| Cow position: | chr11:377926-377626 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 205-502 |
| Cow position: | chr11:1362756-1362452 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-502 |
| Cow position: | chr11:14308363-14308655 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 205-502 |
| Cow position: | chr11:42003229-42002932 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 205-504 |
| Cow position: | chr11:55761604-55761886 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-506 |
| Cow position: | chr11:56892544-56892837 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 205-508 |
| Cow position: | chr11:1668399-1668692 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 205-508 |
| Cow position: | chr11:12950217-12949925 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 29 |
| Conread position: | 205-514 |
| Cow position: | chr11:33341421-33341122 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-516 |
| Cow position: | chr11:71309804-71309499 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 206-458 |
| Cow position: | chr11:53142487-53142248 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 206-503 |
| Cow position: | chr11:58312966-58313256 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 206-506 |
| Cow position: | chr11:20491299-20491589 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 206-506 |
| Cow position: | chr11:35282848-35283159 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 206-506 |
| Cow position: | chr11:62738941-62739238 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 207-439 |
| Cow position: | chr11:77207775-77207998 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 207-499 |
| Cow position: | chr11:16000655-16000942 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 207-506 |
| Cow position: | chr11:68422807-68423084 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 207-510 |
| Cow position: | chr11:11125389-11125685 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 208-495 |
| Cow position: | chr11:32071877-32072161 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 209-418 |
| Cow position: | chr11:73474045-73473839 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 209-433 |
| Cow position: | chr11:70163628-70163850 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 210-502 |
| Cow position: | chr11:34032466-34032186 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 210-508 |
| Cow position: | chr11:24584909-24585203 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 212-503 |
| Cow position: | chr11:18145073-18144800 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 269, 21 |
| Conread position: | 215-506 |
| Cow position: | chr11:32439214-32438931 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 216-467 |
| Cow position: | chr11:34121492-34121742 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 21 |
| Conread position: | 216-503 |
| Cow position: | chr11:17192546-17192263 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 216-508 |
| Cow position: | chr11:30952783-30952495 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 21 |
| Conread position: | 220-499 |
| Cow position: | chr11:49410594-49410329 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 221-504 |
| Cow position: | chr11:45889694-45889977 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 224-506 |
| Cow position: | chr11:43526381-43526110 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 227-506 |
| Cow position: | chr11:19269325-19269066 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 228-461 |
| Cow position: | chr11:10876983-10877212 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 229-439 |
| Cow position: | chr11:65956020-65955808 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 229-450 |
| Cow position: | chr11:56728693-56728909 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 229-496 |
| Cow position: | chr11:45872572-45872301 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 229-497 |
| Cow position: | chr11:42519488-42519749 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 230-450 |
| Cow position: | chr11:35154080-35153863 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 230-498 |
| Cow position: | chr11:39808736-39809005 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 234-439 |
| Cow position: | chr11:25165195-25165396 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 235-504 |
| Cow position: | chr11:64904748-64905016 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 235-506 |
| Cow position: | chr11:67236160-67236418 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 248-486 |
| Cow position: | chr11:35668953-35668714 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 249-447 |
| Cow position: | chr11:36301313-36301116 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 131, 78 |
| Conread position: | 251-514 |
| Cow position: | chr11:33348416-33348164 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 258-451 |
| Cow position: | chr11:18372855-18373039 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 260-435 |
| Cow position: | chr11:47903629-47903801 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 267-497 |
| Cow position: | chr11:75242431-75242656 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 268-450 |
| Cow position: | chr11:876886-877062 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 270-505 |
| Cow position: | chr11:9083260-9083496 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 280-504 |
| Cow position: | chr11:27764951-27765171 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 285-508 |
| Cow position: | chr11:72375885-72375661 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 289-500 |
| Cow position: | chr11:36286506-36286709 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 290-485 |
| Cow position: | chr11:12896808-12896992 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 290-502 |
| Cow position: | chr11:13592542-13592751 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 294-506 |
| Cow position: | chr11:70097096-70097303 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 145, 13 |
| Conread position: | 295-453 |
| Cow position: | chr11:48012145-48011996 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 296-486 |
| Cow position: | chr11:55821895-55821707 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 304-485 |
| Cow position: | chr11:78543754-78543932 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 304-506 |
| Cow position: | chr11:52832886-52832701 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 180, 23 |
| Conread position: | 315-498 |
| Cow position: | chr11:9874150-9874332 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 170, 12 |
| Conread position: | 315-505 |
| Cow position: | chr11:31894107-31894291 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 326-504 |
| Cow position: | chr11:65445007-65444825 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 327-508 |
| Cow position: | chr11:7683814-7683988 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 344-505 |
| Cow position: | chr11:51745212-51745368 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 344-506 |
| Cow position: | chr11:31575855-31576018 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 347-506 |
| Cow position: | chr11:26468005-26468168 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 124 |
| Conread position: | 350-507 |
| Cow position: | chr11:37372172-37372326 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 355-501 |
| Cow position: | chr11:8846629-8846478 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 362-506 |
| Cow position: | chr11:84795873-84795729 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 372-506 |
| Cow position: | chr11:41034675-41034814 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.