Cow genome map

Conread name: Pig2-102D19

Conread position: 1-447
Cow position:
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 74

Conread position: 1-448
Cow position:
Alignm length: 454
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 39

Conread position: 2-435
Cow position:
Alignm length: 438
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 14

Conread position: 2-438
Cow position:
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 244

Conread position: 2-446
Cow position:
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 75

Conread position: 2-453
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 150, 58

Conread position: 2-485
Cow position:
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 2-498
Cow position:
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 2-499
Cow position:
Alignm length: 508
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 2-504
Cow position:
Alignm length: 515
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 7-508
Cow position:
Alignm length: 511
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 64

Conread position: 8-434
Cow position:
Alignm length: 429
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 230

Conread position: 8-446
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 250, 70

Conread position: 8-506
Cow position:
Alignm length: 509
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 231

Conread position: 9-447
Cow position:
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 9-448
Cow position:
Alignm length: 443
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 68

Conread position: 9-485
Cow position:
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 51

Conread position: 9-506
Cow position:
Alignm length: 507
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 230

Conread position: 9-506
Cow position:
Alignm length: 506
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 10-506
Cow position:
Alignm length: 501
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 92

Conread position: 13-467
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 71

Conread position: 14-503
Cow position:
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 27

Conread position: 14-508
Cow position:
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 225

Conread position: 15-506
Cow position:
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 236

Conread position: 17-451
Cow position:
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 62

Conread position: 25-501
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 71

Conread position: 31-508
Cow position:
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 29

Conread position: 32-501
Cow position:
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 142

Conread position: 33-498
Cow position:
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 7

Conread position: 44-471
Cow position:
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 115

Conread position: 58-504
Cow position:
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 148

Conread position: 59-484
Cow position:
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 71-498
Cow position:
Alignm length: 437
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 166

Conread position: 80-494
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 84-440
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 106-438
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 95, 68

Conread position: 111-443
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 128-502
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 62

Conread position: 131-447
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 68

Conread position: 139-506
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 28

Conread position: 142-510
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 16

Conread position: 143-449
Cow position:
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 108

Conread position: 144-445
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 93

Conread position: 156-443
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 80

Conread position: 162-507
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 70

Conread position: 170-499
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 25

Conread position: 172-482
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 30

Conread position: 174-496
Cow position:
Alignm length: 329
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 53

Conread position: 197-483
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 61, 5

Conread position: 197-502
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 39

Conread position: 197-508
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 38

Conread position: 200-489
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 19

Conread position: 200-498
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 34

Conread position: 201-421
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 80

Conread position: 205-423
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 205-442
Cow position:
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 205-451
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 29

Conread position: 205-460
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 33

Conread position: 205-486
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 205-492
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 29

Conread position: 205-503
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 33

Conread position: 205-506
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 205-506
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 207-427
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 27

Conread position: 207-498
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 207-506
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 207-506
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 27

Conread position: 208-508
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 26

Conread position: 212-453
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 22

Conread position: 212-453
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 22

Conread position: 212-503
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 39

Conread position: 212-506
Cow position:
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 212-508
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 22

Conread position: 213-503
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 21

Conread position: 215-442
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 93

Conread position: 215-505
Cow position:
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 215-506
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 19

Conread position: 217-502
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 20

Conread position: 219-502
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 15

Conread position: 220-500
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 110

Conread position: 220-513
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 250, 14

Conread position: 223-502
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 100

Conread position: 225-502
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 73

Conread position: 226-505
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 102

Conread position: 229-442
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 77

Conread position: 229-504
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 69

Conread position: 229-508
Cow position:
Alignm length: 285
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 92

Conread position: 235-506
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 93

Conread position: 236-503
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 92

Conread position: 243-499
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 85

Conread position: 245-445
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 257-499
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 68

Conread position: 263-506
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 183, 40

Conread position: 265-486
Cow position:
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 275-508
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 214, 30

Conread position: 276-513
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 147, 51

Conread position: 282-461
Cow position:
Alignm length: 180
Alignm identity: 149
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 283-508
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 173, 22

Conread position: 285-506
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 202, 42

Conread position: 288-508
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 19

Conread position: 293-502
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 150, 16

Conread position: 309-495
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 18

Conread position: 310-469
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 18

Conread position: 331-498
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 17

Conread position: 346-495
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 120

Conread position: 360-506
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 392-499
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 97, 46

Show alignments to all cow chromosomes.