Cow genome map
| Conread name: | Pig2-102D19 |
| Conread position: | 1-503 |
| Cow position: | chr23:16610272-16609769 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 236 |
| Conread position: | 2-448 |
| Cow position: | chr23:37191038-37190605 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 298 |
| Conread position: | 2-459 |
| Cow position: | chr23:23470472-23470927 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 2-499 |
| Cow position: | chr23:20586174-20585665 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 4-461 |
| Cow position: | chr23:406608-406181 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 195, 17 |
| Conread position: | 5-506 |
| Cow position: | chr23:14126102-14126606 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 8-427 |
| Cow position: | chr23:15710528-15710113 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 39 |
| Conread position: | 8-439 |
| Cow position: | chr23:3745158-3745580 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 118 |
| Conread position: | 8-451 |
| Cow position: | chr23:18491725-18492149 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 55 |
| Conread position: | 8-495 |
| Cow position: | chr23:13520009-13520478 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 69 |
| Conread position: | 8-500 |
| Cow position: | chr23:792477-791996 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 185 |
| Conread position: | 8-503 |
| Cow position: | chr23:10852606-10853089 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 80 |
| Conread position: | 8-503 |
| Cow position: | chr23:40861905-40862383 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 103 |
| Conread position: | 8-504 |
| Cow position: | chr23:22804280-22804762 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 8-508 |
| Cow position: | chr23:13598905-13599382 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 69 |
| Conread position: | 9-461 |
| Cow position: | chr23:10014098-10014531 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 9-502 |
| Cow position: | chr23:9595277-9594799 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 69 |
| Conread position: | 10-503 |
| Cow position: | chr23:19002521-19002031 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 227 |
| Conread position: | 10-506 |
| Cow position: | chr23:615355-614861 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 178 |
| Conread position: | 30-456 |
| Cow position: | chr23:7750760-7751171 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 85 |
| Conread position: | 41-451 |
| Cow position: | chr23:7175207-7175599 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 15 |
| Conread position: | 44-506 |
| Cow position: | chr23:11434686-11434220 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 204 |
| Conread position: | 59-506 |
| Cow position: | chr23:40526375-40525943 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 56 |
| Conread position: | 67-502 |
| Cow position: | chr23:38455579-38455143 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 91-500 |
| Cow position: | chr23:25408465-25408866 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 92-508 |
| Cow position: | chr23:16058228-16058632 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 145 |
| Conread position: | 100-499 |
| Cow position: | chr23:31607535-31607117 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 152 |
| Conread position: | 104-502 |
| Cow position: | chr23:9734061-9734446 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 104-508 |
| Cow position: | chr23:17000356-17000749 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 117-502 |
| Cow position: | chr23:5162081-5162465 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 145-508 |
| Cow position: | chr23:20752695-20753054 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 161-440 |
| Cow position: | chr23:29459396-29459117 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 171-504 |
| Cow position: | chr23:20171287-20171617 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 184-507 |
| Cow position: | chr23:7550927-7550612 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 189-439 |
| Cow position: | chr23:21453004-21452759 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 191-458 |
| Cow position: | chr23:12408782-12408519 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 197-495 |
| Cow position: | chr23:4562623-4562912 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 198-482 |
| Cow position: | chr23:38854996-38854722 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 265, 36 |
| Conread position: | 200-500 |
| Cow position: | chr23:37224326-37224032 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 201-440 |
| Cow position: | chr23:4810491-4810722 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 201-506 |
| Cow position: | chr23:41590168-41589881 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 205-439 |
| Cow position: | chr23:9711844-9711610 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-450 |
| Cow position: | chr23:1991682-1991446 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 205-504 |
| Cow position: | chr23:17092743-17092459 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-507 |
| Cow position: | chr23:11380513-11380215 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 206-502 |
| Cow position: | chr23:16583163-16582874 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 206-503 |
| Cow position: | chr23:7221268-7220976 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 207-492 |
| Cow position: | chr23:29034060-29034340 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 211-504 |
| Cow position: | chr23:15872950-15872656 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 212-428 |
| Cow position: | chr23:38248652-38248854 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 212-498 |
| Cow position: | chr23:16237508-16237219 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 212-503 |
| Cow position: | chr23:2436574-2436290 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 212-513 |
| Cow position: | chr23:20781576-20781868 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 216-506 |
| Cow position: | chr23:13359576-13359867 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 226-455 |
| Cow position: | chr23:25189103-25189332 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 230-492 |
| Cow position: | chr23:36076053-36075794 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 235-504 |
| Cow position: | chr23:40891134-40891400 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 235-506 |
| Cow position: | chr23:30307681-30307948 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 242-487 |
| Cow position: | chr23:32662355-32662598 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 247-439 |
| Cow position: | chr23:32148551-32148364 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 251-499 |
| Cow position: | chr23:28895179-28894922 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 251-502 |
| Cow position: | chr23:18296596-18296842 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 263-504 |
| Cow position: | chr23:35177120-35177356 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 199, 35 |
| Conread position: | 266-458 |
| Cow position: | chr23:30773874-30773689 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 283-505 |
| Cow position: | chr23:40651640-40651434 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 290-486 |
| Cow position: | chr23:39028604-39028797 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 295-485 |
| Cow position: | chr23:7252902-7253084 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 171, 14 |
| Conread position: | 303-506 |
| Cow position: | chr23:6031718-6031916 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 326-504 |
| Cow position: | chr23:26050896-26051076 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 329-476 |
| Cow position: | chr23:496514-496367 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 330-494 |
| Cow position: | chr23:2956045-2956204 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 374-502 |
| Cow position: | chr23:21276115-21275984 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 16 |
Show alignments to all cow chromosomes.