Cow genome map
| Conread name: | Pig2-102D19 |
| Conread position: | 1-506 |
| Cow position: | chr25:18160851-18161322 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 2-438 |
| Cow position: | chr25:2135906-2136320 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 256, 69 |
| Conread position: | 2-506 |
| Cow position: | chr25:23410200-23410699 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 4-495 |
| Cow position: | chr25:20496078-20496556 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 8-437 |
| Cow position: | chr25:12204016-12204435 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 71 |
| Conread position: | 8-443 |
| Cow position: | chr25:4002349-4002772 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 205, 58 |
| Conread position: | 8-445 |
| Cow position: | chr25:24227798-24227366 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 16 |
| Conread position: | 8-455 |
| Cow position: | chr25:26654455-26654892 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 68 |
| Conread position: | 8-461 |
| Cow position: | chr25:36779043-36779487 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 77 |
| Conread position: | 8-462 |
| Cow position: | chr25:20394746-20395179 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 211 |
| Conread position: | 8-475 |
| Cow position: | chr25:394899-395355 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 32 |
| Conread position: | 8-506 |
| Cow position: | chr25:24136910-24136406 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 245 |
| Conread position: | 9-450 |
| Cow position: | chr25:10012507-10012067 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 50 |
| Conread position: | 9-504 |
| Cow position: | chr25:14569909-14570408 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 10-439 |
| Cow position: | chr25:27504624-27504210 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 63 |
| Conread position: | 10-485 |
| Cow position: | chr25:12824479-12824006 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 325 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 175, 37 |
| Conread position: | 10-501 |
| Cow position: | chr25:25827010-25827497 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 66 |
| Conread position: | 11-435 |
| Cow position: | chr25:21191039-21191450 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 60 |
| Conread position: | 16-469 |
| Cow position: | chr25:37687603-37687183 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 60 |
| Conread position: | 24-504 |
| Cow position: | chr25:20076055-20076530 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 30-499 |
| Cow position: | chr25:12235183-12234733 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 33-507 |
| Cow position: | chr25:22910299-22909820 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 77-473 |
| Cow position: | chr25:31733122-31732735 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 77-485 |
| Cow position: | chr25:5514620-5515025 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 77-502 |
| Cow position: | chr25:26225427-26224998 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 77-507 |
| Cow position: | chr25:7641838-7641415 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 84-451 |
| Cow position: | chr25:4680859-4681210 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 330, 10 |
| Conread position: | 88-506 |
| Cow position: | chr25:18000906-18000495 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 96 |
| Conread position: | 91-462 |
| Cow position: | chr25:6464404-6464043 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 92-504 |
| Cow position: | chr25:12239510-12239114 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 102-502 |
| Cow position: | chr25:40957351-40956953 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 135 |
| Conread position: | 112-473 |
| Cow position: | chr25:10137751-10138093 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 126-439 |
| Cow position: | chr25:2126128-2126433 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 111 |
| Conread position: | 128-498 |
| Cow position: | chr25:20625268-20624904 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 95 |
| Conread position: | 137-502 |
| Cow position: | chr25:9957364-9957007 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 142-439 |
| Cow position: | chr25:9961491-9961203 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 200-475 |
| Cow position: | chr25:13798965-13799215 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 200-481 |
| Cow position: | chr25:35344774-35345038 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 200-486 |
| Cow position: | chr25:35625435-35625172 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 200-502 |
| Cow position: | chr25:36081611-36081906 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 200-506 |
| Cow position: | chr25:8512355-8512052 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 38 |
| Conread position: | 205-502 |
| Cow position: | chr25:12081574-12081291 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 206-461 |
| Cow position: | chr25:16001779-16001539 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 206-505 |
| Cow position: | chr25:22575776-22575490 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 207-460 |
| Cow position: | chr25:33142167-33141919 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 208-499 |
| Cow position: | chr25:10448955-10448684 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 212-433 |
| Cow position: | chr25:36026755-36026970 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 212-506 |
| Cow position: | chr25:34668992-34669279 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 215-502 |
| Cow position: | chr25:24405985-24405702 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 216-488 |
| Cow position: | chr25:10205128-10204860 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 228-504 |
| Cow position: | chr25:8560631-8560902 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 235-441 |
| Cow position: | chr25:14467316-14467110 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 92 |
| Conread position: | 236-487 |
| Cow position: | chr25:36033206-36033451 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 236-506 |
| Cow position: | chr25:17365487-17365223 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 243-433 |
| Cow position: | chr25:16007566-16007755 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 253-503 |
| Cow position: | chr25:33245720-33245951 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 257-505 |
| Cow position: | chr25:26270142-26269907 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 210, 48 |
| Conread position: | 280-446 |
| Cow position: | chr25:11989703-11989532 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 280-502 |
| Cow position: | chr25:18905696-18905916 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 280-508 |
| Cow position: | chr25:36644139-36643921 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 282-434 |
| Cow position: | chr25:35110313-35110163 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 284-505 |
| Cow position: | chr25:26457865-26457643 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 285-431 |
| Cow position: | chr25:32606506-32606362 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 295-504 |
| Cow position: | chr25:17144253-17144461 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 27 |
| Conread position: | 298-503 |
| Cow position: | chr25:27535081-27534886 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 305-502 |
| Cow position: | chr25:21893174-21893369 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 307-505 |
| Cow position: | chr25:16560337-16560138 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 315-508 |
| Cow position: | chr25:36501392-36501204 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 330-506 |
| Cow position: | chr25:16691523-16691696 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 332-499 |
| Cow position: | chr25:33112106-33111940 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 154, 16 |
| Conread position: | 334-506 |
| Cow position: | chr25:9519189-9519356 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 356-506 |
| Cow position: | chr25:14075187-14075339 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 372-503 |
| Cow position: | chr25:107184-107051 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 98, 69 |
Show alignments to all cow chromosomes.