Cow genome map

Conread name: Pig2-102D19

Conread position: 2-424
Cow position: chr28:2090716-2091132 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 14

Conread position: 2-437
Cow position: chr28:29074217-29073780 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 56

Conread position: 2-454
Cow position: chr28:31972205-31971766 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 2-458
Cow position: chr28:14493110-14493535 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 22

Conread position: 2-485
Cow position: chr28:21844506-21844975 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 2-492
Cow position: chr28:7751737-7751276 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 14

Conread position: 2-498
Cow position: chr28:13693287-13693789 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 4-451
Cow position: chr28:7864882-7865311 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 75

Conread position: 4-502
Cow position: chr28:9285812-9285332 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 75

Conread position: 4-504
Cow position: chr28:2814947-2814469 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 68

Conread position: 4-506
Cow position: chr28:15677441-15677928 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 31

Conread position: 8-354
Cow position: chr28:7724120-7723774 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 233

Conread position: 8-435
Cow position: chr28:7685121-7684712 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 68

Conread position: 8-450
Cow position: chr28:30303632-30303209 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 8-453
Cow position: chr28:30994835-30995267 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 12

Conread position: 8-501
Cow position: chr28:21598696-21598215 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 18

Conread position: 9-498
Cow position: chr28:10642466-10641994 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 62

Conread position: 9-508
Cow position: chr28:25726934-25727416 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 9-514
Cow position: chr28:3914266-3914762 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 70

Conread position: 10-502
Cow position: chr28:21380441-21380919 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 45

Conread position: 11-506
Cow position: chr28:32300814-32300312 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 67

Conread position: 29-444
Cow position: chr28:30294011-30293605 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 48

Conread position: 32-506
Cow position: chr28:3770097-3769622 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 219

Conread position: 44-503
Cow position: chr28:6486186-6486634 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 63-501
Cow position: chr28:30977890-30978309 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 96

Conread position: 68-462
Cow position: chr28:10744815-10745207 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 133, 19

Conread position: 72-506
Cow position: chr28:18463011-18462570 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 84

Conread position: 77-508
Cow position: chr28:25563696-25564129 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 122

Conread position: 83-453
Cow position: chr28:6971715-6971364 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 118, 154

Conread position: 87-425
Cow position: chr28:17738449-17738113 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 9

Conread position: 91-453
Cow position: chr28:16364339-16363979 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 91-486
Cow position: chr28:33163825-33163440 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 168, 75

Conread position: 107-493
Cow position: chr28:34878321-34877942 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 151, 37

Conread position: 111-485
Cow position: chr28:9851288-9851631 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 147, 121

Conread position: 118-487
Cow position: chr28:7549403-7549038 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 119

Conread position: 127-448
Cow position: chr28:7590515-7590197 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 46

Conread position: 137-519
Cow position: chr28:19222916-19222549 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 64

Conread position: 145-495
Cow position: chr28:4308212-4307868 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 92

Conread position: 148-448
Cow position: chr28:29455965-29455673 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 148-457
Cow position: chr28:2124128-2124421 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 89

Conread position: 160-487
Cow position: chr28:10035116-10035412 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 163-516
Cow position: chr28:7606940-7607289 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 7

Conread position: 169-502
Cow position: chr28:31110295-31109966 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 68

Conread position: 169-504
Cow position: chr28:23008018-23007690 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 32, 132

Conread position: 173-492
Cow position: chr28:25596348-25596655 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 62

Conread position: 184-502
Cow position: chr28:15263999-15263676 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 51

Conread position: 197-440
Cow position: chr28:24996847-24996613 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 37

Conread position: 200-502
Cow position: chr28:16253111-16252818 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 33

Conread position: 200-503
Cow position: chr28:11380299-11380001 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 59, 34

Conread position: 200-504
Cow position: chr28:2518093-2517770 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 34

Conread position: 200-514
Cow position: chr28:8408479-8408779 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 78

Conread position: 204-447
Cow position: chr28:16244011-16243776 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 30

Conread position: 204-506
Cow position: chr28:14218728-14218433 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 205-433
Cow position: chr28:27659947-27659711 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 32

Conread position: 205-439
Cow position: chr28:22081327-22081540 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 33

Conread position: 205-440
Cow position: chr28:26719109-26719327 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 29

Conread position: 205-477
Cow position: chr28:15688790-15689054 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 27

Conread position: 205-506
Cow position: chr28:9177005-9176709 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 205-506
Cow position: chr28:23621297-23621580 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 205-508
Cow position: chr28:34199349-34199063 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 32

Conread position: 205-516
Cow position: chr28:25796865-25797172 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 29

Conread position: 207-440
Cow position: chr28:2898746-2898973 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 27

Conread position: 207-455
Cow position: chr28:17153533-17153760 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 26

Conread position: 207-460
Cow position: chr28:21873523-21873769 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 27

Conread position: 207-500
Cow position: chr28:27218071-27218359 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 51, 31

Conread position: 208-446
Cow position: chr28:28414422-28414655 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 208-502
Cow position: chr28:15498466-15498167 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 212-483
Cow position: chr28:2340287-2340553 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 212-485
Cow position: chr28:8084453-8084722 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 22

Conread position: 215-499
Cow position: chr28:30961681-30961943 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 19

Conread position: 216-506
Cow position: chr28:11501132-11500845 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 223-504
Cow position: chr28:4275065-4274803 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 14

Conread position: 228-445
Cow position: chr28:34430657-34430440 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 102

Conread position: 228-504
Cow position: chr28:4098615-4098870 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 62

Conread position: 229-440
Cow position: chr28:16204563-16204350 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 100

Conread position: 229-451
Cow position: chr28:23775816-23776031 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 99

Conread position: 229-508
Cow position: chr28:11006947-11007245 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 99

Conread position: 229-515
Cow position: chr28:750997-751274 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 18

Conread position: 231-444
Cow position: chr28:17625364-17625152 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 27, 99

Conread position: 238-505
Cow position: chr28:15082143-15081880 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 127, 8

Conread position: 262-435
Cow position: chr28:19564019-19563851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 268-439
Cow position: chr28:26982936-26982762 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 59

Conread position: 282-485
Cow position: chr28:19023957-19024163 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 63

Conread position: 292-498
Cow position: chr28:26901240-26901034 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 126, 35

Conread position: 295-500
Cow position: chr28:23352403-23352613 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 32

Conread position: 295-502
Cow position: chr28:15577425-15577224 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 299-508
Cow position: chr28:33285276-33285066 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 29

Conread position: 304-505
Cow position: chr28:21570030-21570232 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 306-507
Cow position: chr28:4763722-4763923 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 137, 14

Conread position: 307-508
Cow position: chr28:23668940-23668738 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 20

Conread position: 342-508
Cow position: chr28:9237192-9237359 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 119

Conread position: 355-506
Cow position: chr28:1202348-1202202 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 369-506
Cow position: chr28:19253380-19253525 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 397-506
Cow position: chr28:31166053-31165940 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.