Cow genome map
| Conread name: | Pig2-102D19 |
| Conread position: | 1-462 |
| Cow position: | chr3:61539316-61539770 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 75 |
| Conread position: | 1-497 |
| Cow position: | chr3:53538033-53538523 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 75 |
| Conread position: | 2-423 |
| Cow position: | chr3:70130303-70129881 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 14 |
| Conread position: | 2-430 |
| Cow position: | chr3:82473560-82473995 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 2-442 |
| Cow position: | chr3:33633355-33632943 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 14 |
| Conread position: | 2-484 |
| Cow position: | chr3:83443122-83442666 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 335 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 96, 162 |
| Conread position: | 2-504 |
| Cow position: | chr3:33327206-33327720 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 2-508 |
| Cow position: | chr3:38497454-38497952 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 247 |
| Conread position: | 4-439 |
| Cow position: | chr3:74561879-74561464 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-451 |
| Cow position: | chr3:79208466-79208040 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 74 |
| Conread position: | 4-462 |
| Cow position: | chr3:7857872-7858335 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 6-501 |
| Cow position: | chr3:40344918-40345417 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 234 |
| Conread position: | 7-451 |
| Cow position: | chr3:1831040-1830618 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 7-484 |
| Cow position: | chr3:49337234-49337714 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 104 |
| Conread position: | 8-419 |
| Cow position: | chr3:70913567-70913151 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 8-450 |
| Cow position: | chr3:42603348-42603785 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 231 |
| Conread position: | 8-473 |
| Cow position: | chr3:43658194-43657728 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 8-485 |
| Cow position: | chr3:44535234-44534770 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 315 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 250, 68 |
| Conread position: | 8-492 |
| Cow position: | chr3:65968681-65969162 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 137 |
| Conread position: | 8-502 |
| Cow position: | chr3:49218782-49218305 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 8-502 |
| Cow position: | chr3:49649907-49650397 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 68 |
| Conread position: | 8-503 |
| Cow position: | chr3:80082291-80081803 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 69 |
| Conread position: | 8-504 |
| Cow position: | chr3:63147636-63147139 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 8-505 |
| Cow position: | chr3:15685380-15684909 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 68 |
| Conread position: | 8-508 |
| Cow position: | chr3:18459994-18459513 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 57 |
| Conread position: | 8-514 |
| Cow position: | chr3:26219534-26219035 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 42 |
| Conread position: | 8-515 |
| Cow position: | chr3:64281421-64280913 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 331 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 9-437 |
| Cow position: | chr3:2506952-2506532 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 70 |
| Conread position: | 9-460 |
| Cow position: | chr3:14466177-14465748 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 67 |
| Conread position: | 9-504 |
| Cow position: | chr3:72131775-72131287 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 68 |
| Conread position: | 9-505 |
| Cow position: | chr3:31907637-31907131 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 9-508 |
| Cow position: | chr3:7566887-7566402 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 70 |
| Conread position: | 10-427 |
| Cow position: | chr3:49327475-49327875 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 46 |
| Conread position: | 10-439 |
| Cow position: | chr3:58350105-58350535 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 59 |
| Conread position: | 10-500 |
| Cow position: | chr3:42489793-42489294 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 142 |
| Conread position: | 10-506 |
| Cow position: | chr3:12255003-12255494 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 22 |
| Conread position: | 12-498 |
| Cow position: | chr3:54959729-54960194 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 65 |
| Conread position: | 21-502 |
| Cow position: | chr3:50614178-50614650 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 180 |
| Conread position: | 25-455 |
| Cow position: | chr3:48296248-48296671 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 26-449 |
| Cow position: | chr3:14262939-14263349 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 42 |
| Conread position: | 28-438 |
| Cow position: | chr3:23476548-23476947 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 33-506 |
| Cow position: | chr3:53588848-53588370 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 207 |
| Conread position: | 33-507 |
| Cow position: | chr3:46350193-46350687 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 40-507 |
| Cow position: | chr3:56059345-56059825 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 43-498 |
| Cow position: | chr3:36174520-36174060 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 34 |
| Conread position: | 52-506 |
| Cow position: | chr3:51147101-51146657 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 67-502 |
| Cow position: | chr3:46094404-46094833 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 78-502 |
| Cow position: | chr3:79292418-79292838 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 96-501 |
| Cow position: | chr3:42584139-42584551 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 245 |
| Conread position: | 98-506 |
| Cow position: | chr3:50461950-50462350 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 111-439 |
| Cow position: | chr3:13352983-13353308 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 111-502 |
| Cow position: | chr3:49461314-49460917 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 126 |
| Conread position: | 113-467 |
| Cow position: | chr3:22021346-22021001 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 115-462 |
| Cow position: | chr3:48211136-48211458 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 142-504 |
| Cow position: | chr3:77224768-77225130 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 144-456 |
| Cow position: | chr3:3457565-3457882 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 145-447 |
| Cow position: | chr3:22954192-22953905 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 145-506 |
| Cow position: | chr3:83816144-83815774 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 148-455 |
| Cow position: | chr3:2393312-2393003 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 148-498 |
| Cow position: | chr3:4222979-4223310 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 153-502 |
| Cow position: | chr3:65058367-65058707 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 155-502 |
| Cow position: | chr3:78530209-78530544 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 161-440 |
| Cow position: | chr3:73776946-73777232 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 169-502 |
| Cow position: | chr3:28898547-28898214 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 172-432 |
| Cow position: | chr3:53112852-53113112 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 176-502 |
| Cow position: | chr3:27784967-27785279 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 191-499 |
| Cow position: | chr3:45691161-45690864 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 191-506 |
| Cow position: | chr3:27532958-27532641 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 197-451 |
| Cow position: | chr3:32399542-32399298 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 199-511 |
| Cow position: | chr3:56704141-56703832 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 200-446 |
| Cow position: | chr3:19789404-19789160 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-455 |
| Cow position: | chr3:4031683-4031933 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-485 |
| Cow position: | chr3:59205956-59206232 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-498 |
| Cow position: | chr3:44623182-44622883 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 200-502 |
| Cow position: | chr3:8393654-8393948 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 200-504 |
| Cow position: | chr3:42480339-42480630 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 200-506 |
| Cow position: | chr3:23111789-23111499 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 200-506 |
| Cow position: | chr3:45647852-45648143 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 200-508 |
| Cow position: | chr3:55124563-55124265 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 201-433 |
| Cow position: | chr3:16810075-16809845 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 202-446 |
| Cow position: | chr3:23496839-23496617 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 205-419 |
| Cow position: | chr3:55815064-55815264 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-433 |
| Cow position: | chr3:17284556-17284785 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 205-433 |
| Cow position: | chr3:51227875-51228110 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 205-437 |
| Cow position: | chr3:25691469-25691698 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-442 |
| Cow position: | chr3:66116392-66116162 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 205-445 |
| Cow position: | chr3:65581296-65581064 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 205-450 |
| Cow position: | chr3:19006387-19006616 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 205-454 |
| Cow position: | chr3:32869869-32870109 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-473 |
| Cow position: | chr3:34316244-34315977 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-474 |
| Cow position: | chr3:81473724-81473992 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 205-495 |
| Cow position: | chr3:77365574-77365288 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-499 |
| Cow position: | chr3:55373870-55373559 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 205-506 |
| Cow position: | chr3:22170909-22171200 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 205-506 |
| Cow position: | chr3:37451789-37452082 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-506 |
| Cow position: | chr3:56637386-56637678 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 205-506 |
| Cow position: | chr3:58174631-58174918 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 29 |
| Conread position: | 205-506 |
| Cow position: | chr3:62292396-62292105 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 29 |
| Conread position: | 205-506 |
| Cow position: | chr3:74699675-74699369 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 205-508 |
| Cow position: | chr3:54862704-54862401 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 205-508 |
| Cow position: | chr3:62883922-62884219 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 205-516 |
| Cow position: | chr3:48629866-48629566 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 206-441 |
| Cow position: | chr3:48433666-48433898 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 206-497 |
| Cow position: | chr3:20437924-20437654 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 206-504 |
| Cow position: | chr3:57624184-57624475 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 206-506 |
| Cow position: | chr3:58130721-58131009 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 207-502 |
| Cow position: | chr3:5096925-5097216 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 207-504 |
| Cow position: | chr3:27546111-27545808 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 207-506 |
| Cow position: | chr3:23092266-23091962 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 207-506 |
| Cow position: | chr3:36100550-36100851 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 208-483 |
| Cow position: | chr3:45744436-45744689 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 208-502 |
| Cow position: | chr3:58540807-58540521 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 215-498 |
| Cow position: | chr3:8923775-8924051 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 215-506 |
| Cow position: | chr3:8457386-8457668 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 215-506 |
| Cow position: | chr3:74611292-74611577 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 215-508 |
| Cow position: | chr3:13302126-13301835 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 218-505 |
| Cow position: | chr3:7366144-7365880 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 220-441 |
| Cow position: | chr3:73394851-73395070 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 226-458 |
| Cow position: | chr3:4087427-4087199 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 226-506 |
| Cow position: | chr3:41718127-41718405 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 228-508 |
| Cow position: | chr3:54881498-54881782 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 229-506 |
| Cow position: | chr3:20092763-20092512 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 230-504 |
| Cow position: | chr3:14633244-14632972 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 231-450 |
| Cow position: | chr3:81401563-81401348 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 235-439 |
| Cow position: | chr3:26970573-26970773 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 235-508 |
| Cow position: | chr3:18725886-18725629 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 246-506 |
| Cow position: | chr3:55992112-55991855 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 250-495 |
| Cow position: | chr3:15859906-15859666 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 201, 25 |
| Conread position: | 256-487 |
| Cow position: | chr3:71135558-71135783 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 214, 71 |
| Conread position: | 257-502 |
| Cow position: | chr3:55106672-55106430 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 99, 72 |
| Conread position: | 257-504 |
| Cow position: | chr3:11711724-11711976 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 6 |
| Conread position: | 260-500 |
| Cow position: | chr3:26960821-26960581 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 209, 67 |
| Conread position: | 263-462 |
| Cow position: | chr3:12576537-12576332 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 263-486 |
| Cow position: | chr3:47524732-47524516 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 200, 34 |
| Conread position: | 263-505 |
| Cow position: | chr3:61913377-61913603 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 181, 20 |
| Conread position: | 264-506 |
| Cow position: | chr3:61009658-61009420 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 268-499 |
| Cow position: | chr3:70354457-70354227 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 271-461 |
| Cow position: | chr3:63038920-63039098 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 276-506 |
| Cow position: | chr3:3736074-3736312 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 277-427 |
| Cow position: | chr3:15976959-15977103 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 277-506 |
| Cow position: | chr3:55777824-55778050 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 172, 50 |
| Conread position: | 278-498 |
| Cow position: | chr3:18757985-18757781 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 280-498 |
| Cow position: | chr3:79376052-79376277 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 280-504 |
| Cow position: | chr3:2198676-2198894 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 206, 20 |
| Conread position: | 282-440 |
| Cow position: | chr3:10896624-10896777 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 282-475 |
| Cow position: | chr3:43029076-43028869 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 285-502 |
| Cow position: | chr3:27697184-27696969 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 286-505 |
| Cow position: | chr3:74206010-74205796 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 287-435 |
| Cow position: | chr3:8790794-8790649 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 287-436 |
| Cow position: | chr3:83395993-83396139 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 301-508 |
| Cow position: | chr3:50281947-50281737 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 302-506 |
| Cow position: | chr3:61322660-61322854 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 303-468 |
| Cow position: | chr3:2810431-2810269 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 303-487 |
| Cow position: | chr3:4082282-4082106 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 304-486 |
| Cow position: | chr3:78647318-78647496 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 309-500 |
| Cow position: | chr3:35278389-35278583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 311-503 |
| Cow position: | chr3:27634193-27634001 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 311-508 |
| Cow position: | chr3:50347787-50347980 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 326-502 |
| Cow position: | chr3:28477923-28478102 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 330-498 |
| Cow position: | chr3:55815694-55815859 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 346-487 |
| Cow position: | chr3:25250762-25250899 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 347-506 |
| Cow position: | chr3:51492636-51492798 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 363-505 |
| Cow position: | chr3:34675590-34675735 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 369-486 |
| Cow position: | chr3:36125698-36125583 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 369-494 |
| Cow position: | chr3:11124902-11124773 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.