Cow genome map
| Conread name: | Pig2-102D19 |
| Conread position: | 1-427 |
| Cow position: | chr5:56467273-56467683 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 200, 78 |
| Conread position: | 1-436 |
| Cow position: | chr5:51293169-51292728 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 285 |
| Conread position: | 1-462 |
| Cow position: | chr5:31480721-31481162 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 200, 76 |
| Conread position: | 1-502 |
| Cow position: | chr5:50637406-50637880 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 1-503 |
| Cow position: | chr5:15882914-15882405 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 201 |
| Conread position: | 1-507 |
| Cow position: | chr5:41334175-41334668 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 132 |
| Conread position: | 1-514 |
| Cow position: | chr5:21828424-21828934 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 77 |
| Conread position: | 1-520 |
| Cow position: | chr5:57074748-57074258 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 343 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 257, 75 |
| Conread position: | 2-197 |
| Cow position: | chr5:13045209-13045014 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 2-438 |
| Cow position: | chr5:6086996-6086564 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 2-446 |
| Cow position: | chr5:26376133-26376555 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 14 |
| Conread position: | 2-446 |
| Cow position: | chr5:49478893-49479332 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 2-451 |
| Cow position: | chr5:39710410-39710849 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 138 |
| Conread position: | 2-482 |
| Cow position: | chr5:4630687-4631159 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 2-492 |
| Cow position: | chr5:41546321-41545848 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 54 |
| Conread position: | 2-503 |
| Cow position: | chr5:68082393-68081913 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 2-506 |
| Cow position: | chr5:27615064-27615577 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 2-506 |
| Cow position: | chr5:40711886-40711376 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 3-502 |
| Cow position: | chr5:360372-359880 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 4-465 |
| Cow position: | chr5:27690494-27690037 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 7-500 |
| Cow position: | chr5:59303699-59303221 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 7-502 |
| Cow position: | chr5:17027667-17028154 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 70 |
| Conread position: | 8-444 |
| Cow position: | chr5:34678470-34678893 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 47 |
| Conread position: | 8-447 |
| Cow position: | chr5:30816290-30816720 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 51 |
| Conread position: | 8-448 |
| Cow position: | chr5:65776822-65776377 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 83 |
| Conread position: | 8-451 |
| Cow position: | chr5:10261668-10261232 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 62 |
| Conread position: | 8-461 |
| Cow position: | chr5:16184667-16185102 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 68 |
| Conread position: | 8-502 |
| Cow position: | chr5:6896546-6896064 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 45 |
| Conread position: | 8-502 |
| Cow position: | chr5:54405320-54404831 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 62 |
| Conread position: | 8-514 |
| Cow position: | chr5:34638468-34638950 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 71 |
| Conread position: | 8-514 |
| Cow position: | chr5:52165604-52165111 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 70 |
| Conread position: | 9-481 |
| Cow position: | chr5:67654881-67655372 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 9-501 |
| Cow position: | chr5:16206566-16206098 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 69 |
| Conread position: | 9-504 |
| Cow position: | chr5:57935529-57935047 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 49 |
| Conread position: | 10-476 |
| Cow position: | chr5:6044863-6045324 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 43 |
| Conread position: | 10-498 |
| Cow position: | chr5:41604183-41604683 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 84 |
| Conread position: | 10-502 |
| Cow position: | chr5:28946486-28946001 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 10-504 |
| Cow position: | chr5:65593450-65593933 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 61 |
| Conread position: | 16-506 |
| Cow position: | chr5:58748345-58748833 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 16-506 |
| Cow position: | chr5:72172613-72173090 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 74 |
| Conread position: | 17-502 |
| Cow position: | chr5:65887430-65886951 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 18-447 |
| Cow position: | chr5:9430904-9430460 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 241 |
| Conread position: | 28-449 |
| Cow position: | chr5:20974863-20974440 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 29-503 |
| Cow position: | chr5:61030639-61030162 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 208 |
| Conread position: | 29-506 |
| Cow position: | chr5:45941027-45940546 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 221 |
| Conread position: | 64-453 |
| Cow position: | chr5:6986783-6987174 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 173 |
| Conread position: | 72-457 |
| Cow position: | chr5:14539015-14538640 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 5 |
| Conread position: | 77-450 |
| Cow position: | chr5:12149185-12149545 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 77-499 |
| Cow position: | chr5:72564397-72564818 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 92 |
| Conread position: | 83-507 |
| Cow position: | chr5:58793970-58793543 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 91-506 |
| Cow position: | chr5:38805692-38805281 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 91-508 |
| Cow position: | chr5:32697145-32696757 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 167, 107 |
| Conread position: | 91-508 |
| Cow position: | chr5:35209820-35209410 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 145 |
| Conread position: | 93-514 |
| Cow position: | chr5:42845946-42845527 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 108, 144 |
| Conread position: | 98-506 |
| Cow position: | chr5:34183877-34184287 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 99-451 |
| Cow position: | chr5:45226168-45225817 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 100-504 |
| Cow position: | chr5:52645419-52645019 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 201 |
| Conread position: | 106-491 |
| Cow position: | chr5:23535840-23536216 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 107-477 |
| Cow position: | chr5:43330025-43329655 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 134 |
| Conread position: | 115-506 |
| Cow position: | chr5:41599022-41598648 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 124-468 |
| Cow position: | chr5:41229396-41229729 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 125-502 |
| Cow position: | chr5:42063888-42064264 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 113 |
| Conread position: | 128-450 |
| Cow position: | chr5:5111388-5111070 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 109 |
| Conread position: | 139-435 |
| Cow position: | chr5:61600112-61600410 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 143-500 |
| Cow position: | chr5:23753509-23753161 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 169-506 |
| Cow position: | chr5:14153872-14154211 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 173-506 |
| Cow position: | chr5:61488374-61488048 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 174-435 |
| Cow position: | chr5:3491936-3492186 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 181-495 |
| Cow position: | chr5:65924959-65924638 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 194-483 |
| Cow position: | chr5:13044654-13044355 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 197-504 |
| Cow position: | chr5:20779619-20779337 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 200-429 |
| Cow position: | chr5:56753491-56753713 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-498 |
| Cow position: | chr5:48144027-48143729 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 200-498 |
| Cow position: | chr5:51502774-51503063 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 200-502 |
| Cow position: | chr5:30844876-30845172 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 200-504 |
| Cow position: | chr5:64398766-64399070 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 200-506 |
| Cow position: | chr5:25919850-25919569 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 201-501 |
| Cow position: | chr5:32956325-32956036 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 281, 34 |
| Conread position: | 202-498 |
| Cow position: | chr5:41636639-41636927 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 204-504 |
| Cow position: | chr5:64758999-64758706 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 205-439 |
| Cow position: | chr5:45036789-45037016 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 205-440 |
| Cow position: | chr5:26046103-26046331 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-441 |
| Cow position: | chr5:19905509-19905270 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 205-446 |
| Cow position: | chr5:56384996-56385231 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 205-453 |
| Cow position: | chr5:33467272-33467031 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-462 |
| Cow position: | chr5:17063325-17063071 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 205-481 |
| Cow position: | chr5:66831945-66831675 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 238, 31 |
| Conread position: | 205-498 |
| Cow position: | chr5:1344089-1343795 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 205-502 |
| Cow position: | chr5:458241-458548 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 205-515 |
| Cow position: | chr5:50900677-50900970 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 206-467 |
| Cow position: | chr5:1276705-1276441 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 206-467 |
| Cow position: | chr5:68480994-68481260 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 206-496 |
| Cow position: | chr5:22839703-22839416 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 206-515 |
| Cow position: | chr5:49685511-49685204 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 207-462 |
| Cow position: | chr5:41303320-41303072 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 208-453 |
| Cow position: | chr5:34922063-34921830 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 208-485 |
| Cow position: | chr5:70582126-70581853 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 208-486 |
| Cow position: | chr5:37714133-37713854 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 212-504 |
| Cow position: | chr5:27411614-27411340 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 251, 22 |
| Conread position: | 212-506 |
| Cow position: | chr5:12803271-12803579 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 213-503 |
| Cow position: | chr5:48757721-48758000 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 214-439 |
| Cow position: | chr5:1027922-1027696 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 214-508 |
| Cow position: | chr5:54111696-54111978 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 217-506 |
| Cow position: | chr5:39442073-39442361 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 224-412 |
| Cow position: | chr5:14512899-14513086 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 140, 10 |
| Conread position: | 228-502 |
| Cow position: | chr5:26262884-26262619 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 229-423 |
| Cow position: | chr5:504119-503938 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 229-444 |
| Cow position: | chr5:62027156-62026946 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 229-503 |
| Cow position: | chr5:58320670-58320410 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 230-506 |
| Cow position: | chr5:39695444-39695715 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 225, 30 |
| Conread position: | 234-498 |
| Cow position: | chr5:1688317-1688056 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 239-506 |
| Cow position: | chr5:32282131-32282397 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 254-506 |
| Cow position: | chr5:54089854-54090099 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 256-508 |
| Cow position: | chr5:63188507-63188261 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 181, 55 |
| Conread position: | 257-486 |
| Cow position: | chr5:57575585-57575811 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 205, 70 |
| Conread position: | 257-500 |
| Cow position: | chr5:34167780-34168020 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 213, 54 |
| Conread position: | 257-502 |
| Cow position: | chr5:47323270-47323521 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 258-506 |
| Cow position: | chr5:36486306-36486557 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 262-514 |
| Cow position: | chr5:29980161-29979915 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 172, 52 |
| Conread position: | 263-504 |
| Cow position: | chr5:55928768-55929005 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 198, 41 |
| Conread position: | 273-486 |
| Cow position: | chr5:37068727-37068931 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 189, 54 |
| Conread position: | 275-508 |
| Cow position: | chr5:73526215-73526432 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 279-444 |
| Cow position: | chr5:44417512-44417348 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 280-498 |
| Cow position: | chr5:38629130-38629346 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 163, 8 |
| Conread position: | 280-508 |
| Cow position: | chr5:7552576-7552351 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 281-504 |
| Cow position: | chr5:23529433-23529221 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 207, 46 |
| Conread position: | 282-446 |
| Cow position: | chr5:59356831-59356994 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 139 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 282-498 |
| Cow position: | chr5:33265602-33265408 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 204, 31 |
| Conread position: | 295-498 |
| Cow position: | chr5:39182057-39181857 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 32 |
| Conread position: | 296-504 |
| Cow position: | chr5:48405319-48405115 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 299-508 |
| Cow position: | chr5:73556328-73556130 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 303-446 |
| Cow position: | chr5:42795012-42794879 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 309-510 |
| Cow position: | chr5:29844147-29844347 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 311-506 |
| Cow position: | chr5:31561402-31561600 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 132, 16 |
| Conread position: | 316-443 |
| Cow position: | chr5:13906742-13906867 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 316-487 |
| Cow position: | chr5:36407033-36407198 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 326-508 |
| Cow position: | chr5:41713186-41713361 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 141, 22 |
| Conread position: | 329-506 |
| Cow position: | chr5:4927680-4927501 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 337-506 |
| Cow position: | chr5:17268002-17267828 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 346-504 |
| Cow position: | chr5:21535212-21535050 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 351-499 |
| Cow position: | chr5:59449666-59449514 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
Show alignments to all cow chromosomes.