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Cow genome map

           
Conread name:
           
Pig2-106G07
        

               
Conread position:
               
44-319
               

               
Cow position:
               
chr13:52057368-52057644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr13:15069785-15069963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
170, 60
               

               
Conread position:
               
47-304
               

               
Cow position:
               
chr13:10845431-10845678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 60
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr13:45593736-45594004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr13:5279393-5279075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
48-168
               

               
Cow position:
               
chr13:9108858-9108734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-169
               

               
Cow position:
               
chr13:53847305-53847179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
48-173
               

               
Cow position:
               
chr13:5659951-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
48-176
               

               
Cow position:
               
chr13:34300034-34299910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
48-179
               

               
Cow position:
               
chr13:23823216-23823082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-181
               

               
Cow position:
               
chr13:7097400-7097541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
48-181
               

               
Cow position:
               
chr13:37946572-37946435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
48-189
               

               
Cow position:
               
chr13:1339331-1339179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-192
               

               
Cow position:
               
chr13:8367532-8367680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
48-192
               

               
Cow position:
               
chr13:57446299-57446154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
48-196
               

               
Cow position:
               
chr13:15060467-15060608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
48-205
               

               
Cow position:
               
chr13:369312-369146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr13:45499045-45499208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
48-208
               

               
Cow position:
               
chr13:21277643-21277487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
48-209
               

               
Cow position:
               
chr13:37555057-37554893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
48-209
               

               
Cow position:
               
chr13:52913690-52913854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr13:11146867-11147039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr13:37030163-37030324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
48-211
               

               
Cow position:
               
chr13:3153561-3153733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
48-211
               

               
Cow position:
               
chr13:8637508-8637681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
48-211
               

               
Cow position:
               
chr13:9124742-9124907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
48-212
               

               
Cow position:
               
chr13:13797003-13796827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
48-212
               

               
Cow position:
               
chr13:20042450-20042281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr13:24094503-24094330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr13:11565653-11565825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr13:2393205-2393380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr13:17813285-17813465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr13:21294894-21295069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
48-223
               

               
Cow position:
               
chr13:4404348-4404527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
48-224
               

               
Cow position:
               
chr13:38012153-38012328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
48-225
               

               
Cow position:
               
chr13:50583004-50582823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr13:14644867-14645049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr13:20217584-20217400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr13:40541295-40541107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
48-231
               

               
Cow position:
               
chr13:28536507-28536318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr13:6980739-6980924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr13:52536385-52536569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr13:6486439-6486245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr13:15144017-15143837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr13:16908027-16908223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr13:55765362-55765172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr13:57986118-57985932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr13:8699929-8699728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr13:18340344-18340542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr13:21981156-21980967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr13:2776098-2776300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr13:6926326-6926529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr13:56958791-56958980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr13:59461061-59461250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
48-243
               

               
Cow position:
               
chr13:33974560-33974749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
48-243
               

               
Cow position:
               
chr13:50646815-50646618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
48-250
               

               
Cow position:
               
chr13:17089699-17089498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr13:17611737-17611529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
48-255
               

               
Cow position:
               
chr13:47243740-47243528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
48-260
               

               
Cow position:
               
chr13:38035653-38035871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chr13:34873399-34873633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr13:585060-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
48-271
               

               
Cow position:
               
chr13:52641137-52640903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
48-275
               

               
Cow position:
               
chr13:12673474-12673245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
48-275
               

               
Cow position:
               
chr13:21171758-21171520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr13:62007921-62008166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
48-290
               

               
Cow position:
               
chr13:6860989-6861251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
48-294
               

               
Cow position:
               
chr13:52055779-52055521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
48-299
               

               
Cow position:
               
chr13:46111782-46112044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr13:19779041-19778770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 212
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr13:46043988-46044241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr13:15195387-15195121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr13:20473861-20473593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr13:44278158-44278440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr13:11260091-11260359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr13:13533848-13533579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr13:2192551-2192803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr13:10989260-10988983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr13:15257555-15257284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr13:15868923-15869215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr13:56035043-56034766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
48-316
               

               
Cow position:
               
chr13:14063707-14063427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:8362933-8362659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:8374947-8374675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:9975254-9974979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:12876162-12875876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:15445863-15446139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr13:19223465-19223743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr13:20360089-20360368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
48-320
               

               
Cow position:
               
chr13:17823136-17822855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
48-320
               

               
Cow position:
               
chr13:47007899-47007631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr13:6189786-6189516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr13:18851902-18852180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr13:19022078-19022375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr13:43479875-43480157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr13:49795852-49796120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
80, 65
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:2773929-2774230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
43, 216
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:4552639-4552904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:5263465-5263187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:9800335-9800608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:12670638-12670345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:14576029-14576309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:15041661-15041371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:15194907-15194629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:15289105-15288826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:17114567-17114275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:17745072-17745342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:17821444-17821165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 58
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:18166546-18166836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:19883220-19882933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:20784408-20784691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:20880011-20879730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:21235854-21235584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:21275670-21275957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:24230023-24230312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:24715063-24715346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:25817343-25817625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:26261978-26261696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:29831613-29831334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:32282938-32283227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:34263559-34263266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:37985934-37985656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:42200434-42200721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:45074089-45073823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:47186044-47186327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:48597723-48598012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:49503724-49503428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:55674396-55674106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:56686255-56686535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr13:58763795-58763529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr13:20137631-20137929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr13:16038469-16038189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr13:21288271-21287984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr13:6973976-6974266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr13:25926602-25926895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr13:28552400-28552699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr13:43139385-43139121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr13:6442293-6441999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr13:10220771-10221052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr13:18929339-18929634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr13:18999345-18999645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr13:1568748-1569032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr13:52893962-52894250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr13:54128784-54128483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
48-331
               

               
Cow position:
               
chr13:52477831-52477537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr13:18994936-18995237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr13:19240253-19240546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr13:13338672-13338970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr13:15974432-15974724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr13:10925109-10924800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr13:620434-620145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
48-344
               

               
Cow position:
               
chr13:42113829-42114145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
49-186
               

               
Cow position:
               
chr13:21426004-21425871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr13:49356234-49356043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 145
               

               
Conread position:
               
49-236
               

               
Cow position:
               
chr13:6465868-6465681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
49-304
               

               
Cow position:
               
chr13:34261050-34261313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 192
               

               
Conread position:
               
49-306
               

               
Cow position:
               
chr13:27180852-27181115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr13:15193073-15192787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr13:38329433-38329729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
49-327
               

               
Cow position:
               
chr13:15991416-15991125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr13:21242260-21242122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
50-197
               

               
Cow position:
               
chr13:52177418-52177570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
50-198
               

               
Cow position:
               
chr13:1363276-1363425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr13:37751254-37751074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
50-233
               

               
Cow position:
               
chr13:7104471-7104660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
50-233
               

               
Cow position:
               
chr13:15993199-15993392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
50-233
               

               
Cow position:
               
chr13:47676121-47675929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr13:15083477-15083671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr13:37069157-37069357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 147
               

               
Conread position:
               
50-246
               

               
Cow position:
               
chr13:7046696-7046888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr13:48222733-48222527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
50-271
               

               
Cow position:
               
chr13:16020675-16020899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr13:1147335-1147098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr13:12206877-12207125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr13:33256313-33256583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr13:17159066-17158787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr13:4665034-4664773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr13:19188130-19188393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
50-315
               

               
Cow position:
               
chr13:18197792-18197509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
50-315
               

               
Cow position:
               
chr13:32017700-32017432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr13:13501795-13501525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr13:61977142-61976866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
50-321
               

               
Cow position:
               
chr13:49023050-49022774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr13:21127526-21127243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:18058431-18058143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:19033371-19033657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:20154821-20155103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:20174554-20174851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:20881105-20880823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:24753709-24753983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:25435290-25435017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:60509308-60509018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr13:6663940-6663642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr13:44201825-44202096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
50-328
               

               
Cow position:
               
chr13:45352843-45353149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr13:47964357-47964089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
212, 75
               

               
Conread position:
               
50-332
               

               
Cow position:
               
chr13:25579378-25579078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr13:6616947-6616641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 282
               

               
Conread position:
               
50-353
               

               
Cow position:
               
chr13:19278911-19279222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
51-176
               

               
Cow position:
               
chr13:9492590-9492720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
51-206
               

               
Cow position:
               
chr13:6976026-6975867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
51-231
               

               
Cow position:
               
chr13:10522756-10522937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr13:44003513-44003708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr13:55494705-55494517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 139
               

               
Conread position:
               
51-241
               

               
Cow position:
               
chr13:25941449-25941248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
51-251
               

               
Cow position:
               
chr13:52459659-52459462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr13:11434760-11434521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr13:45073432-45073179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
51-317
               

               
Cow position:
               
chr13:19582264-19581991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr13:6540484-6540210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr13:38278323-38278037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:6079586-6079316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:12282653-12282937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:14771273-14771558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:20839397-20839666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:26480389-26480110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:27525443-27525162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:46329789-46329501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:49804802-49805073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr13:46515873-46516175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
51-340
               

               
Cow position:
               
chr13:17498035-17498336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
51-340
               

               
Cow position:
               
chr13:20534714-20535002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
52-201
               

               
Cow position:
               
chr13:9391382-9391533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
52-212
               

               
Cow position:
               
chr13:30148742-30148579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr13:7190785-7191051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr13:5758519-5758238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr13:8667433-8667716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr13:19393109-19393392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
52-331
               

               
Cow position:
               
chr13:34729025-34728734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
53-194
               

               
Cow position:
               
chr13:47538333-47538191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
53-203
               

               
Cow position:
               
chr13:16163405-16163557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
53-213
               

               
Cow position:
               
chr13:8393068-8392912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
53-215
               

               
Cow position:
               
chr13:50622992-50622825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
53-239
               

               
Cow position:
               
chr13:15996853-15997046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr13:20519890-20520074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
53-271
               

               
Cow position:
               
chr13:7149682-7149466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 44
               

               
Conread position:
               
53-314
               

               
Cow position:
               
chr13:26698678-26698404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
53-318
               

               
Cow position:
               
chr13:43595288-43595016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
53-321
               

               
Cow position:
               
chr13:20666567-20666287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
53-322
               

               
Cow position:
               
chr13:37593132-37592842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr13:17021906-17021626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr13:25604787-25604527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr13:37818930-37818647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr13:54389202-54388916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
53-328
               

               
Cow position:
               
chr13:5911074-5910793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr13:8355029-8355300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr13:24369404-24369683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
54-331
               

               
Cow position:
               
chr13:151785-152064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
54-350
               

               
Cow position:
               
chr13:185356-185665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
56-226
               

               
Cow position:
               
chr13:11942347-11942181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr13:25504360-25504553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
56-314
               

               
Cow position:
               
chr13:23512208-23512459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
206, 51
               

               
Conread position:
               
56-319
               

               
Cow position:
               
chr13:9587763-9587491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
57-223
               

               
Cow position:
               
chr13:13286548-13286373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr13:40943068-40943342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr13:23167271-23166994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
58-180
               

               
Cow position:
               
chr13:42613906-42614037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
58-181
               

               
Cow position:
               
chr13:57929748-57929616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
58-214
               

               
Cow position:
               
chr13:28439231-28439395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr13:38703055-38702872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
58-251
               

               
Cow position:
               
chr13:28071693-28071896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr13:47193220-47193423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr13:11321785-11321518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr13:40722869-40722610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr13:12449166-12448890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr13:15110142-15110422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr13:23270367-23270109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr13:51940561-51940839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
59-231
               

               
Cow position:
               
chr13:54652493-54652325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
60-259
               

               
Cow position:
               
chr13:8232835-8233029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr13:3315842-3315575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
62-312
               

               
Cow position:
               
chr13:3211379-3211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
63-324
               

               
Cow position:
               
chr13:21136071-21135797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 44
               

               
Conread position:
               
64-211
               

               
Cow position:
               
chr13:6608549-6608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
65-324
               

               
Cow position:
               
chr13:18491429-18491704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
66-270
               

               
Cow position:
               
chr13:52586199-52585988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
66-299
               

               
Cow position:
               
chr13:7149064-7149306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr13:4463857-4464100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
66-321
               

               
Cow position:
               
chr13:972065-971793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr13:17439931-17439667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr13:18172173-18172441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr13:60430241-60429972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
68-205
               

               
Cow position:
               
chr13:16790047-16790186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
68-318
               

               
Cow position:
               
chr13:54702013-54702284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr13:17569264-17568997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr13:41806606-41806878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
71-296
               

               
Cow position:
               
chr13:20288485-20288726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
71-321
               

               
Cow position:
               
chr13:18989569-18989814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr13:2413874-2414131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr13:19320371-19320638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
74-318
               

               
Cow position:
               
chr13:26369368-26369622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr13:39367803-39368056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr13:52749628-52749376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
75-271
               

               
Cow position:
               
chr13:37503745-37503534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
76-216
               

               
Cow position:
               
chr13:9884380-9884522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr13:47227513-47227369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
76-274
               

               
Cow position:
               
chr13:11643784-11643991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 115
               

               
Conread position:
               
77-189
               

               
Cow position:
               
chr13:15808615-15808728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
77-319
               

               
Cow position:
               
chr13:4420177-4420442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
78-324
               

               
Cow position:
               
chr13:28683212-28683465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr13:24110331-24110501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
81-249
               

               
Cow position:
               
chr13:18516900-18517068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
81-320
               

               
Cow position:
               
chr13:43185030-43184773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
81-331
               

               
Cow position:
               
chr13:46736067-46736321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
83-239
               

               
Cow position:
               
chr13:6342233-6342077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
83-324
               

               
Cow position:
               
chr13:11591604-11591848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr13:43893468-43893234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr13:1043109-1042863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
86-215
               

               
Cow position:
               
chr13:43787980-43787850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
86-215
               

               
Cow position:
               
chr13:43839819-43839689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
86-253
               

               
Cow position:
               
chr13:36666418-36666247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr13:827102-827316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr13:15885163-15884922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
87-236
               

               
Cow position:
               
chr13:19750572-19750724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
87-236
               

               
Cow position:
               
chr13:51814073-51813927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
87-239
               

               
Cow position:
               
chr13:42640243-42640394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr13:43919403-43919235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-258
               

               
Cow position:
               
chr13:13775386-13775212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
87-260
               

               
Cow position:
               
chr13:41157262-41157439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
87-272
               

               
Cow position:
               
chr13:40154872-40154688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr13:12925636-12925827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
87-290
               

               
Cow position:
               
chr13:55162069-55162280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-292
               

               
Cow position:
               
chr13:5005859-5006063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
87-299
               

               
Cow position:
               
chr13:38873087-38872874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr13:7076114-7076350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr13:12547051-12546818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr13:55727759-55727993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
87-316
               

               
Cow position:
               
chr13:20706348-20706111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr13:60973937-60974180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
87-321
               

               
Cow position:
               
chr13:23960945-23960713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:2404613-2404842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:9265969-9265729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:15282077-15281835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:36771564-36771317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:37803748-37803982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:45023348-45023109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:46181654-46181894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:51822015-51821787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr13:55316340-55316086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
88-209
               

               
Cow position:
               
chr13:37978270-37978150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
88-214
               

               
Cow position:
               
chr13:1075181-1075053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
88-215
               

               
Cow position:
               
chr13:5079505-5079374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
88-271
               

               
Cow position:
               
chr13:9117707-9117524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
88-271
               

               
Cow position:
               
chr13:21283846-21283655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr13:17837809-17838014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
88-303
               

               
Cow position:
               
chr13:17563598-17563816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
88-314
               

               
Cow position:
               
chr13:61990462-61990244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
88-317
               

               
Cow position:
               
chr13:20562853-20563091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr13:37381659-37381902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr13:45725744-45725998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
88-328
               

               
Cow position:
               
chr13:11096042-11096280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
88-329
               

               
Cow position:
               
chr13:35659619-35659861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
88-331
               

               
Cow position:
               
chr13:11381864-11381612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr13:25380820-25381062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
89-338
               

               
Cow position:
               
chr13:4158519-4158778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
89-338
               

               
Cow position:
               
chr13:17110086-17110334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
90-203
               

               
Cow position:
               
chr13:32363320-32363205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
90-251
               

               
Cow position:
               
chr13:54145605-54145450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr13:8609685-8609449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr13:9900019-9900251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr13:23856071-23856321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
91-211
               

               
Cow position:
               
chr13:44434968-44434848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
91-326
               

               
Cow position:
               
chr13:547356-547588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
92-309
               

               
Cow position:
               
chr13:42229175-42229407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr13:37640454-37640680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr13:9142143-9142392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr13:9593370-9593611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
93-214
               

               
Cow position:
               
chr13:39398514-39398637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
93-310
               

               
Cow position:
               
chr13:8524748-8524526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
94-271
               

               
Cow position:
               
chr13:17350219-17350400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
95-226
               

               
Cow position:
               
chr13:43794426-43794552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
95-256
               

               
Cow position:
               
chr13:6183555-6183391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
95-292
               

               
Cow position:
               
chr13:37947085-37946883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
95-302
               

               
Cow position:
               
chr13:37981878-37981664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
95-314
               

               
Cow position:
               
chr13:43829110-43829332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr13:9644015-9643785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr13:43762034-43762272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr13:16014677-16014918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
99-268
               

               
Cow position:
               
chr13:51857015-51856842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
99-295
               

               
Cow position:
               
chr13:9981970-9981767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
99-310
               

               
Cow position:
               
chr13:20679209-20679428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
99-314
               

               
Cow position:
               
chr13:49457554-49457766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr13:311308-311533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
99-329
               

               
Cow position:
               
chr13:8555335-8555566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
100-310
               

               
Cow position:
               
chr13:43194040-43194264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
101-271
               

               
Cow position:
               
chr13:25428351-25428181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
101-312
               

               
Cow position:
               
chr13:51901456-51901683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
101-314
               

               
Cow position:
               
chr13:12614125-12614348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
101-321
               

               
Cow position:
               
chr13:17971157-17970928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr13:31813747-31813974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
101-330
               

               
Cow position:
               
chr13:20650110-20649876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
103-324
               

               
Cow position:
               
chr13:11060861-11061088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr13:7663546-7663321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
106-314
               

               
Cow position:
               
chr13:47322533-47322312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr13:6153906-6153685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr13:15902903-15903119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr13:6061127-6060907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
112-271
               

               
Cow position:
               
chr13:60393667-60393830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
113-311
               

               
Cow position:
               
chr13:17622173-17622371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
115-319
               

               
Cow position:
               
chr13:15529151-15528934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
115-324
               

               
Cow position:
               
chr13:16024480-16024693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
125-314
               

               
Cow position:
               
chr13:8201585-8201392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr13:13176548-13176754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr13:25531892-25531685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr13:52879300-52879509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
125-327
               

               
Cow position:
               
chr13:8652544-8652333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
126-313
               

               
Cow position:
               
chr13:16187997-16187806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
126-324
               

               
Cow position:
               
chr13:18243761-18243964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
127-326
               

               
Cow position:
               
chr13:50713110-50713305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr13:9386119-9385937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
129-330
               

               
Cow position:
               
chr13:7488443-7488642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr13:50751153-50750961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr13:52228197-52228010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr13:30651091-30651275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
132-315
               

               
Cow position:
               
chr13:11955212-11955015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
135-324
               

               
Cow position:
               
chr13:52929619-52929810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr13:12045430-12045235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr13:17613248-17613449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr13:60389580-60389376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
137-330
               

               
Cow position:
               
chr13:61047124-61047309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
139-330
               

               
Cow position:
               
chr13:44626280-44626475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
161-331
               

               
Cow position:
               
chr13:20128600-20128775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
187-329
               

               
Cow position:
               
chr13:30026068-30026219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
189-319
               

               
Cow position:
               
chr13:16711588-16711724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.