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Cow genome map

           
Conread name:
           
Pig2-106G07
        

               
Conread position:
               
16-243
               

               
Cow position:
               
chr3:21997616-21997844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr3:31046777-31047092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
18-189
               

               
Cow position:
               
chr3:73162218-73162389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr3:80053387-80053685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 141
               

               
Conread position:
               
39-327
               

               
Cow position:
               
chr3:38783766-38783472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
47-198
               

               
Cow position:
               
chr3:37641475-37641316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
47-319
               

               
Cow position:
               
chr3:30180232-30179945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr3:53739048-53739327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
48-167
               

               
Cow position:
               
chr3:22078226-22078096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-167
               

               
Cow position:
               
chr3:22903610-22903732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
48-170
               

               
Cow position:
               
chr3:24922890-24922765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
48-172
               

               
Cow position:
               
chr3:2637093-2636964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
48-180
               

               
Cow position:
               
chr3:11607965-11607830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
48-181
               

               
Cow position:
               
chr3:5003780-5003640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
48-181
               

               
Cow position:
               
chr3:19611205-19611345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
48-184
               

               
Cow position:
               
chr3:17039765-17039616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
48-188
               

               
Cow position:
               
chr3:77654068-77653928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
48-189
               

               
Cow position:
               
chr3:12899798-12899941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
48-189
               

               
Cow position:
               
chr3:70333081-70333222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
48-190
               

               
Cow position:
               
chr3:22094466-22094601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
48-190
               

               
Cow position:
               
chr3:43895915-43896062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
48-192
               

               
Cow position:
               
chr3:68624367-68624214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
48-193
               

               
Cow position:
               
chr3:14211838-14211988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
48-196
               

               
Cow position:
               
chr3:15859234-15859386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
48-204
               

               
Cow position:
               
chr3:27286663-27286503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
48-204
               

               
Cow position:
               
chr3:59317848-59317687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr3:23037360-23037527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr3:62312946-62312778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr3:62370205-62370037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
48-208
               

               
Cow position:
               
chr3:50350830-50350988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
48-208
               

               
Cow position:
               
chr3:59681759-59681923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:986163-985993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:4518036-4518207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:18699960-18700132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:43388977-43389149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:58101823-58101658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr3:61023872-61024044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
48-212
               

               
Cow position:
               
chr3:53604596-53604769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
48-213
               

               
Cow position:
               
chr3:44534386-44534555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chr3:78071644-78071817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chr3:81400958-81401125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr3:18831566-18831395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr3:76056140-76056311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr3:80023167-80023335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
48-216
               

               
Cow position:
               
chr3:75966634-75966808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr3:70756491-70756669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
48-218
               

               
Cow position:
               
chr3:22924232-22924404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
48-218
               

               
Cow position:
               
chr3:52845703-52845522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-218
               

               
Cow position:
               
chr3:84174452-84174272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
48-221
               

               
Cow position:
               
chr3:5703324-5703146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr3:44960093-44959909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr3:10733026-10732853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
159, 29
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr3:41863770-41863587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-230
               

               
Cow position:
               
chr3:54905754-54905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
48-231
               

               
Cow position:
               
chr3:79272428-79272616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr3:15973718-15973522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr3:2484150-2483959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr3:3698792-3698614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr3:74644708-74644512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr3:82366277-82366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr3:23203081-23203279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
48-236
               

               
Cow position:
               
chr3:39988104-39988283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
48-237
               

               
Cow position:
               
chr3:15160665-15160474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr3:40212887-40213084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr3:74787574-74787380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
48-250
               

               
Cow position:
               
chr3:31804622-31804828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr3:31361571-31361358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 198
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr3:81234536-81234326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chr3:10668731-10668946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chr3:59299721-59299509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
48-254
               

               
Cow position:
               
chr3:2638081-2637860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
48-256
               

               
Cow position:
               
chr3:23132020-23132240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
48-260
               

               
Cow position:
               
chr3:14547147-14546927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr3:27976374-27976606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr3:46305610-46305387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr3:47316230-47316461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
48-270
               

               
Cow position:
               
chr3:49363255-49363030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
48-271
               

               
Cow position:
               
chr3:39873560-39873783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
48-271
               

               
Cow position:
               
chr3:84250401-84250630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
48-275
               

               
Cow position:
               
chr3:31349960-31350196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr3:75777921-75778154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
48-279
               

               
Cow position:
               
chr3:40145615-40145373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
48-288
               

               
Cow position:
               
chr3:22165267-22165523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
48-293
               

               
Cow position:
               
chr3:46005867-46006122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
48-301
               

               
Cow position:
               
chr3:48459181-48459448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 147
               

               
Conread position:
               
48-302
               

               
Cow position:
               
chr3:52651932-52652198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 148
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr3:58527525-58527277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr3:59604990-59604729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
48-306
               

               
Cow position:
               
chr3:59000615-59000875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
48-309
               

               
Cow position:
               
chr3:13380130-13380413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-309
               

               
Cow position:
               
chr3:61224601-61224869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr3:56678199-56678481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-311
               

               
Cow position:
               
chr3:30463028-30463295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr3:70333821-70334093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
48-313
               

               
Cow position:
               
chr3:51233956-51234226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr3:2506328-2506607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr3:17134479-17134205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr3:53875614-53875890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr3:54373709-54373990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr3:76138607-76138349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
48-316
               

               
Cow position:
               
chr3:9641703-9641432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr3:2392821-2393097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr3:7662005-7661718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr3:13301701-13301982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr3:15443578-15443864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr3:26904247-26903981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr3:60597685-60597408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:2025351-2025050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:2675180-2674892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:9663021-9663307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:19793442-19793727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:29360016-29360276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:53270981-53270693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 148
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:53318558-53318268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 155
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:55712579-55712295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:60264573-60264852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:71231546-71231263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:71496981-71497278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
48-319
               

               
Cow position:
               
chr3:73395263-73394985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
48-320
               

               
Cow position:
               
chr3:53222160-53221877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr3:17235056-17235347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
59, 213
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr3:22232520-22232790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 5
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr3:34271047-34270777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr3:55177603-55177889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr3:78093245-78093522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
48-322
               

               
Cow position:
               
chr3:14553020-14552739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
48-322
               

               
Cow position:
               
chr3:18393254-18393527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
48-322
               

               
Cow position:
               
chr3:67520028-67520311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:210470-210176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:3883672-3883960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:3889429-3889708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:3985464-3985186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:8393488-8393210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:11254017-11254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:15051804-15052093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:15153836-15153551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:17936699-17936976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:20802492-20802764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:23105217-23105507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:23920278-23920569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:26970961-26970686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:27274675-27274390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:29813374-29813103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:34871716-34871427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:36375390-36375683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:39969715-39970009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:44932660-44932371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:45211452-45211159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:45647814-45647539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:45882047-45881768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:50768827-50768541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:52608329-52608046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:53046510-53046798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:53150481-53150187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:54506854-54506568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:55189602-55189897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:56476822-56476539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:57274206-57273925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:59597321-59597042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:59610571-59610862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:62046819-62046521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:64280790-64281073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:68587166-68586879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:68648325-68648024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:68707874-68708145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
219, 77
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:68880983-68881253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:70761975-70762264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:71238298-71238015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:73764067-73764335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:74533482-74533211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:75050473-75050760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:75480146-75479861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:76922525-76922804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr3:83491228-83490945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr3:77582254-77581967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr3:2036452-2036157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr3:11987476-11987186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr3:43233651-43233366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr3:65058846-65058561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:4050329-4050051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:17957609-17957321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:33252744-33253021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:55819897-55819606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:57754327-57754621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr3:76267826-76268123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr3:2648360-2648655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr3:57577844-57577554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr3:59035191-59034892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr3:62998847-62999142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr3:53384132-53384430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
48-330
               

               
Cow position:
               
chr3:66900578-66900883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr3:82055980-82056258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr3:65969322-65969010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
48-335
               

               
Cow position:
               
chr3:72342396-72342091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr3:1517365-1517665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr3:14194041-14194334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr3:17058399-17058695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 146
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr3:71238623-71238318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
48-344
               

               
Cow position:
               
chr3:48363217-48362923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
49-185
               

               
Cow position:
               
chr3:12637651-12637512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
49-215
               

               
Cow position:
               
chr3:28902615-28902785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr3:59947815-59947625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
49-243
               

               
Cow position:
               
chr3:23753631-23753443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr3:71474260-71474466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr3:48468323-48468058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
49-312
               

               
Cow position:
               
chr3:3032556-3032276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
49-313
               

               
Cow position:
               
chr3:61894034-61894299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
49-317
               

               
Cow position:
               
chr3:35153753-35153487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr3:17221986-17222285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr3:54946271-54945987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr3:76713165-76713465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr3:83215416-83215118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
49-326
               

               
Cow position:
               
chr3:22221473-22221178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
49-326
               

               
Cow position:
               
chr3:73237330-73237051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
50-181
               

               
Cow position:
               
chr3:64909949-64910089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr3:2016578-2016434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr3:83199659-83199510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
50-200
               

               
Cow position:
               
chr3:11716127-11715986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
50-207
               

               
Cow position:
               
chr3:20158220-20158050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 151
               

               
Conread position:
               
50-207
               

               
Cow position:
               
chr3:28884016-28884179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
50-211
               

               
Cow position:
               
chr3:19788685-19788852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
50-211
               

               
Cow position:
               
chr3:31115132-31115292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
50-212
               

               
Cow position:
               
chr3:47198979-47199150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
50-212
               

               
Cow position:
               
chr3:56943783-56943951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
50-213
               

               
Cow position:
               
chr3:27246821-27246983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr3:20021414-20021240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr3:28896875-28897048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr3:77276319-77276487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
50-221
               

               
Cow position:
               
chr3:76270034-76269860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr3:35624397-35624586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
50-233
               

               
Cow position:
               
chr3:30357655-30357478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr3:68303464-68303268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr3:5040157-5040357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr3:64196971-64196775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr3:79271563-79271763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
50-252
               

               
Cow position:
               
chr3:9025937-9026148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
50-261
               

               
Cow position:
               
chr3:35075018-35074808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr3:75238606-75238374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
50-271
               

               
Cow position:
               
chr3:11640882-11640642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr3:65019711-65019974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
50-299
               

               
Cow position:
               
chr3:54435114-54434858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
50-311
               

               
Cow position:
               
chr3:73299214-73298958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr3:35055830-35056108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr3:77365141-77365427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:18687047-18686776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:25477938-25477683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:59474266-59473989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:65237169-65236894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:65413128-65413411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr3:84199810-84199545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
50-316
               

               
Cow position:
               
chr3:76156132-76155854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr3:18059850-18059567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr3:51578178-51578457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr3:55318752-55319038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 272
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr3:58764940-58765218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:1830427-1830710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:12705401-12705687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:15159180-15158900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:20841734-20841996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:23408216-23408493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:48253025-48252743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:58317797-58318096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:59040716-59040426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr3:70896185-70895909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr3:7566275-7566561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr3:17456121-17456406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr3:81087490-81087763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
50-328
               

               
Cow position:
               
chr3:72391234-72390941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 151
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr3:55010025-55010306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr3:72566-72273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr3:3556694-3556403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr3:70334546-70334843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr3:40100583-40100856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr3:44102113-44101821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr3:48900184-48900492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr3:19711190-19711506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
51-210
               

               
Cow position:
               
chr3:3401687-3401524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
51-215
               

               
Cow position:
               
chr3:46559571-46559741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr3:71423421-71423599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr3:23804650-23804431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr3:39247884-39248107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
51-300
               

               
Cow position:
               
chr3:3656663-3656393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 148
               

               
Conread position:
               
51-300
               

               
Cow position:
               
chr3:14801892-14801630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr3:80740701-80740443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
51-311
               

               
Cow position:
               
chr3:24872840-24872586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr3:18459389-18459652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr3:31309206-31309485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr3:59333903-59333641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr3:75853187-75853462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr3:21081232-21081509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr3:76024649-76024383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr3:10958096-10958384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 142
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr3:23168920-23169207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr3:29887292-29887563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr3:67744495-67744764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr3:75158503-75158218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
51-326
               

               
Cow position:
               
chr3:14465567-14465855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 138
               

               
Conread position:
               
51-328
               

               
Cow position:
               
chr3:13329648-13329919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
51-328
               

               
Cow position:
               
chr3:53910254-53909972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
51-330
               

               
Cow position:
               
chr3:73820217-73820517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
52-184
               

               
Cow position:
               
chr3:53249629-53249497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
52-311
               

               
Cow position:
               
chr3:54739751-54740017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr3:38828895-38828627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr3:57764362-57764086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
52-330
               

               
Cow position:
               
chr3:37041565-37041269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr3:10372405-10372124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
53-191
               

               
Cow position:
               
chr3:26760002-26759862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
53-206
               

               
Cow position:
               
chr3:54557809-54557657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
53-229
               

               
Cow position:
               
chr3:18001331-18001157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr3:39996748-39996934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr3:52457057-52456872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
53-236
               

               
Cow position:
               
chr3:3584483-3584299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
53-312
               

               
Cow position:
               
chr3:23471320-23471592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
53-316
               

               
Cow position:
               
chr3:64010667-64010956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
53-319
               

               
Cow position:
               
chr3:48241753-48241480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr3:5374454-5374193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 54
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr3:19793043-19792752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
53-328
               

               
Cow position:
               
chr3:49482569-49482850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr3:24468239-24468525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr3:32585288-32585007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
53-330
               

               
Cow position:
               
chr3:21014811-21015107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
53-331
               

               
Cow position:
               
chr3:74500400-74500090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
55-199
               

               
Cow position:
               
chr3:35582982-35582828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
55-211
               

               
Cow position:
               
chr3:4271510-4271350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr3:55124140-55124395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
55-302
               

               
Cow position:
               
chr3:15950777-15951031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
55-309
               

               
Cow position:
               
chr3:35621436-35621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr3:5100635-5100899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
55-319
               

               
Cow position:
               
chr3:71247159-71246890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
55-324
               

               
Cow position:
               
chr3:20677707-20677976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr3:59649399-59649113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 149
               

               
Conread position:
               
55-329
               

               
Cow position:
               
chr3:5365806-5365531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr3:63657728-63657911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
58-157
               

               
Cow position:
               
chr3:83921457-83921357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
58-206
               

               
Cow position:
               
chr3:25037856-25038009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
58-224
               

               
Cow position:
               
chr3:24596286-24596458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
58-306
               

               
Cow position:
               
chr3:61323472-61323210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
58-313
               

               
Cow position:
               
chr3:77271140-77271404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr3:14601565-14601848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr3:15751576-15751862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr3:26982196-26981925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
59-189
               

               
Cow position:
               
chr3:47284948-47284812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr3:53904580-53904406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr3:69650753-69650940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
61-202
               

               
Cow position:
               
chr3:35285172-35285030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
61-206
               

               
Cow position:
               
chr3:77589642-77589496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
61-221
               

               
Cow position:
               
chr3:8813986-8814145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
61-305
               

               
Cow position:
               
chr3:78945712-78945957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
65-320
               

               
Cow position:
               
chr3:13507593-13507329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
65-322
               

               
Cow position:
               
chr3:6690134-6689862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
65-324
               

               
Cow position:
               
chr3:8061255-8060986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
66-198
               

               
Cow position:
               
chr3:2179242-2179110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
66-209
               

               
Cow position:
               
chr3:41366577-41366730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr3:25692149-25692004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
66-252
               

               
Cow position:
               
chr3:28258217-28258031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
66-267
               

               
Cow position:
               
chr3:36914175-36913972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
66-306
               

               
Cow position:
               
chr3:8901753-8901519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr3:17934815-17935063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr3:26921034-26920778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr3:48296823-48296578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr3:80072253-80071990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr3:14626026-14626298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr3:54100606-54100862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
67-313
               

               
Cow position:
               
chr3:28898090-28898352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
67-314
               

               
Cow position:
               
chr3:49790689-49790941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
67-318
               

               
Cow position:
               
chr3:58767389-58767134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
67-349
               

               
Cow position:
               
chr3:73709176-73708881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
68-164
               

               
Cow position:
               
chr3:58691038-58691137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
68-226
               

               
Cow position:
               
chr3:82123422-82123585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
68-240
               

               
Cow position:
               
chr3:20515695-20515870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
68-246
               

               
Cow position:
               
chr3:4549152-4548968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
68-310
               

               
Cow position:
               
chr3:31225554-31225312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr3:53790411-53790678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr3:68145723-68145983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr3:75107900-75107653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 131
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr3:80565092-80564822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
71-208
               

               
Cow position:
               
chr3:8526246-8526383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
71-245
               

               
Cow position:
               
chr3:3947157-3946982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
71-296
               

               
Cow position:
               
chr3:36160067-36160304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
71-336
               

               
Cow position:
               
chr3:15228708-15228972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr3:63269340-63269081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr3:75080879-75080629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr3:82461298-82461037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
75-267
               

               
Cow position:
               
chr3:48477918-48478114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr3:8733245-8733496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
76-196
               

               
Cow position:
               
chr3:31352759-31352883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
77-324
               

               
Cow position:
               
chr3:66375434-66375177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr3:53113287-53113027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
80-288
               

               
Cow position:
               
chr3:3316707-3316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
80-293
               

               
Cow position:
               
chr3:33329930-33329703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
80-312
               

               
Cow position:
               
chr3:5366879-5366641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
80-317
               

               
Cow position:
               
chr3:52863072-52863318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
80-324
               

               
Cow position:
               
chr3:18067243-18066994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
80-324
               

               
Cow position:
               
chr3:55835709-55835966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
81-319
               

               
Cow position:
               
chr3:34669626-34669863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
81-324
               

               
Cow position:
               
chr3:43727181-43726936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
84-305
               

               
Cow position:
               
chr3:3649119-3649340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr3:67930078-67930321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr3:55271938-55272188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
86-221
               

               
Cow position:
               
chr3:24372026-24371890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
86-222
               

               
Cow position:
               
chr3:11705356-11705218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr3:19006764-19006522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
87-189
               

               
Cow position:
               
chr3:52634211-52634107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
87-189
               

               
Cow position:
               
chr3:75772898-75772794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
87-196
               

               
Cow position:
               
chr3:53256631-53256520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
87-202
               

               
Cow position:
               
chr3:6853433-6853547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
87-204
               

               
Cow position:
               
chr3:15660191-15660305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
87-210
               

               
Cow position:
               
chr3:1534002-1534126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-233
               

               
Cow position:
               
chr3:68130188-68130328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
87-239
               

               
Cow position:
               
chr3:4481046-4480892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
87-239
               

               
Cow position:
               
chr3:64373052-64373208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr3:55984202-55983986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
87-306
               

               
Cow position:
               
chr3:10104144-10103924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr3:63179958-63179731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr3:84175720-84175957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr3:12711811-12712052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr3:24615747-24615973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr3:59621544-59621779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
87-318
               

               
Cow position:
               
chr3:4319814-4319580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-318
               

               
Cow position:
               
chr3:79645326-79645577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr3:24935468-24935234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
87-321
               

               
Cow position:
               
chr3:79196862-79196621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:1785142-1785383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:2680617-2680376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:26874693-26874450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:46901300-46901057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:48810542-48810778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:59630409-59630643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:59691992-59691757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:59883966-59884213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:61144198-61143959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr3:66883841-66884081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr3:17447511-17447751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
87-329
               

               
Cow position:
               
chr3:67704650-67704396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
88-211
               

               
Cow position:
               
chr3:28937503-28937627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
88-236
               

               
Cow position:
               
chr3:21642088-21641940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr3:7428101-7427891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
88-301
               

               
Cow position:
               
chr3:33693922-33693699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
88-312
               

               
Cow position:
               
chr3:61279011-61278786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr3:49328045-49327805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr3:75045773-75046018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
88-335
               

               
Cow position:
               
chr3:81470993-81471247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
89-226
               

               
Cow position:
               
chr3:64648594-64648455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
89-271
               

               
Cow position:
               
chr3:74900541-74900724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr3:75570352-75570580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr3:30222292-30222046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr3:57624566-57624324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
90-314
               

               
Cow position:
               
chr3:22510124-22509895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr3:74134805-74134564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
90-327
               

               
Cow position:
               
chr3:5097307-5097062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
91-239
               

               
Cow position:
               
chr3:57877666-57877515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
91-244
               

               
Cow position:
               
chr3:67959822-67959972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
91-273
               

               
Cow position:
               
chr3:23667720-23667535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
91-289
               

               
Cow position:
               
chr3:27940043-27940249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
91-314
               

               
Cow position:
               
chr3:20993912-20993680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
91-322
               

               
Cow position:
               
chr3:70401996-70401761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
91-322
               

               
Cow position:
               
chr3:72503796-72504039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr3:38691308-38691548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
91-338
               

               
Cow position:
               
chr3:39171390-39171638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
92-233
               

               
Cow position:
               
chr3:56704222-56704366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
92-293
               

               
Cow position:
               
chr3:27727733-27727940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
93-271
               

               
Cow position:
               
chr3:53703866-53704052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
93-324
               

               
Cow position:
               
chr3:17895945-17895705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
94-215
               

               
Cow position:
               
chr3:13349056-13349175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
94-312
               

               
Cow position:
               
chr3:16254746-16254953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr3:32183923-32184152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
94-318
               

               
Cow position:
               
chr3:57760595-57760364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
96-242
               

               
Cow position:
               
chr3:909539-909687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr3:61116760-61116994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
96-324
               

               
Cow position:
               
chr3:62826524-62826760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
97-236
               

               
Cow position:
               
chr3:58940219-58940078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
97-324
               

               
Cow position:
               
chr3:45648223-45647991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr3:74846616-74846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
99-232
               

               
Cow position:
               
chr3:11292157-11292292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
99-310
               

               
Cow position:
               
chr3:51033457-51033243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr3:19585954-19585720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr3:24352951-24352719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
99-324
               

               
Cow position:
               
chr3:55970597-55970365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr3:83928336-83928159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
100-312
               

               
Cow position:
               
chr3:18725554-18725765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
100-313
               

               
Cow position:
               
chr3:64172530-64172314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr3:55085080-55085312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr3:8394032-8393795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr3:37186916-37186689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr3:50614731-50614496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr3:70565648-70565879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
101-213
               

               
Cow position:
               
chr3:40199206-40199319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
101-226
               

               
Cow position:
               
chr3:68059403-68059278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
101-251
               

               
Cow position:
               
chr3:51349912-51349761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
101-319
               

               
Cow position:
               
chr3:26960499-26960726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr3:15506537-15506310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr3:26218964-26219191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr3:80581744-80581523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
101-332
               

               
Cow position:
               
chr3:31850288-31850517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
102-302
               

               
Cow position:
               
chr3:4036002-4036196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
102-324
               

               
Cow position:
               
chr3:28908115-28908343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
102-324
               

               
Cow position:
               
chr3:49650476-49650245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
102-324
               

               
Cow position:
               
chr3:66292088-66292318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
103-324
               

               
Cow position:
               
chr3:54781917-54782158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
103-324
               

               
Cow position:
               
chr3:75687351-75687579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
104-327
               

               
Cow position:
               
chr3:38347276-38347060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
104-327
               

               
Cow position:
               
chr3:59101913-59101687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr3:74502242-74502461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
109-324
               

               
Cow position:
               
chr3:55109532-55109758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
109-328
               

               
Cow position:
               
chr3:11712046-11711816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
110-320
               

               
Cow position:
               
chr3:46541749-46541965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
110-321
               

               
Cow position:
               
chr3:61840355-61840138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr3:72676171-72675951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr3:79292908-79292689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
113-253
               

               
Cow position:
               
chr3:81277391-81277530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr3:58968826-58969041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr3:50069840-50069627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
115-319
               

               
Cow position:
               
chr3:3638253-3638051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
115-339
               

               
Cow position:
               
chr3:27545744-27545978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
118-324
               

               
Cow position:
               
chr3:76015361-76015150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr3:7940489-7940697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
124-312
               

               
Cow position:
               
chr3:73759453-73759645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
125-321
               

               
Cow position:
               
chr3:75711369-75711173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr3:23444825-23445034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr3:78896710-78896508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
125-325
               

               
Cow position:
               
chr3:80468615-80468817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
126-310
               

               
Cow position:
               
chr3:56315-56504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr3:20437594-20437782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
129-259
               

               
Cow position:
               
chr3:45222092-45222228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
129-319
               

               
Cow position:
               
chr3:72019175-72018981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
129-331
               

               
Cow position:
               
chr3:81359048-81359251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
130-232
               

               
Cow position:
               
chr3:44772660-44772558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr3:15954027-15954218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
130-314
               

               
Cow position:
               
chr3:34937902-34937712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr3:30026425-30026240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr3:53592631-53592830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr3:64526906-64526712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
130-324
               

               
Cow position:
               
chr3:11199921-11200122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr3:5044755-5044947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr3:25945151-25944940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr3:31206934-31206731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr3:39661399-39661594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
130-327
               

               
Cow position:
               
chr3:79591833-79592026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
130-331
               

               
Cow position:
               
chr3:13890535-13890327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
131-324
               

               
Cow position:
               
chr3:66609787-66609984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
133-324
               

               
Cow position:
               
chr3:81277637-81277840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
135-324
               

               
Cow position:
               
chr3:74878536-74878730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
136-320
               

               
Cow position:
               
chr3:65800637-65800458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr3:67929209-67929402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
137-326
               

               
Cow position:
               
chr3:68582948-68583144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
137-327
               

               
Cow position:
               
chr3:26489029-26489226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
137-327
               

               
Cow position:
               
chr3:61539852-61539659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
137-327
               

               
Cow position:
               
chr3:81507060-81507253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
139-314
               

               
Cow position:
               
chr3:71430155-71430338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
139-324
               

               
Cow position:
               
chr3:27696929-27697118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
155-334
               

               
Cow position:
               
chr3:80953680-80953495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr3:33698762-33698584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
160-312
               

               
Cow position:
               
chr3:60892653-60892494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
163-324
               

               
Cow position:
               
chr3:5416195-5416360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
165-324
               

               
Cow position:
               
chr3:83201501-83201665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr3:39328421-39328254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
179-324
               

               
Cow position:
               
chr3:42178166-42178017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
184-324
               

               
Cow position:
               
chr3:18056444-18056302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
186-329
               

               
Cow position:
               
chr3:44622883-44623031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
189-314
               

               
Cow position:
               
chr3:78894325-78894454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
192-324
               

               
Cow position:
               
chr3:15790552-15790419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 41
               
Show alignments to all cow chromosomes.