Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig2-106G07
        

               Conread position:
               1-329
               

               Cow position:
               chrX:43527753-43527415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               16-244
               

               Cow position:
               chrX:12191988-12191756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               16-338
               

               Cow position:
               chrX:41192937-41192601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 187
               

               Conread position:
               17-221
               

               Cow position:
               chrX:32235514-32235723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               47-228
               

               Cow position:
               chrX:47061589-47061408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               47-236
               

               Cow position:
               chrX:4327981-4328180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 150
               

               Conread position:
               48-163
               

               Cow position:
               chrX:1571395-1571513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               48-179
               

               Cow position:
               chrX:11589166-11589307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               48-184
               

               Cow position:
               chrX:41199423-41199279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               48-188
               

               Cow position:
               chrX:42539748-42539610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               48-196
               

               Cow position:
               chrX:12944-12793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               48-197
               

               Cow position:
               chrX:8759824-8759668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 113
               

               Conread position:
               48-201
               

               Cow position:
               chrX:30824186-30824028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 145
               

               Conread position:
               48-203
               

               Cow position:
               chrX:16556022-16556180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               48-203
               

               Cow position:
               chrX:42875410-42875250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 146
               

               Conread position:
               48-207
               

               Cow position:
               chrX:17498524-17498355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 149
               

               Conread position:
               48-208
               

               Cow position:
               chrX:8327106-8326936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 150
               

               Conread position:
               48-208
               

               Cow position:
               chrX:31986371-31986542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 151
               

               Conread position:
               48-209
               

               Cow position:
               chrX:19795308-19795472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               48-209
               

               Cow position:
               chrX:47378929-47379090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               48-210
               

               Cow position:
               chrX:2551278-2551121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               48-211
               

               Cow position:
               chrX:2314417-2314590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 150
               

               Conread position:
               48-211
               

               Cow position:
               chrX:5026452-5026285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               48-212
               

               Cow position:
               chrX:44995701-44995526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 150
               

               Conread position:
               48-213
               

               Cow position:
               chrX:11454375-11454213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               48-214
               

               Cow position:
               chrX:23358916-23359085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 131
               

               Conread position:
               48-214
               

               Cow position:
               chrX:35681768-35681592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               44, 149
               

               Conread position:
               48-215
               

               Cow position:
               chrX:32867071-32866900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               48-218
               

               Cow position:
               chrX:28068052-28067872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 146
               

               Conread position:
               48-221
               

               Cow position:
               chrX:12437082-12437251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               48-221
               

               Cow position:
               chrX:28940445-28940261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               48-221
               

               Cow position:
               chrX:41809974-41810149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               54, 141
               

               Conread position:
               48-222
               

               Cow position:
               chrX:19761950-19761772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               48-222
               

               Cow position:
               chrX:20345652-20345471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 146
               

               Conread position:
               48-226
               

               Cow position:
               chrX:4467152-4466981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               48-226
               

               Cow position:
               chrX:20957440-20957252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 150
               

               Conread position:
               48-226
               

               Cow position:
               chrX:27668761-27668944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               48-226
               

               Cow position:
               chrX:29467581-29467764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 145
               

               Conread position:
               48-226
               

               Cow position:
               chrX:39290556-39290373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               48-228
               

               Cow position:
               chrX:46068562-46068747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 145
               

               Conread position:
               48-230
               

               Cow position:
               chrX:31480167-31479981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               48-231
               

               Cow position:
               chrX:4559935-4559747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               48-231
               

               Cow position:
               chrX:40337112-40336919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               49, 141
               

               Conread position:
               48-232
               

               Cow position:
               chrX:47079829-47079634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 150
               

               Conread position:
               48-233
               

               Cow position:
               chrX:1122345-1122537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               48-233
               

               Cow position:
               chrX:38302015-38301815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               48-236
               

               Cow position:
               chrX:17524182-17524381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               47, 92
               

               Conread position:
               48-236
               

               Cow position:
               chrX:42894123-42893927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 162
               

               Conread position:
               48-236
               

               Cow position:
               chrX:43008811-43008612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               48-237
               

               Cow position:
               chrX:35382841-35383031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               48-238
               

               Cow position:
               chrX:24054862-24054672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               48-239
               

               Cow position:
               chrX:34420937-34420734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               45, 151
               

               Conread position:
               48-239
               

               Cow position:
               chrX:35276187-35275986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               48-243
               

               Cow position:
               chrX:2936154-2935954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               48-243
               

               Cow position:
               chrX:11653968-11653760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               48-243
               

               Cow position:
               chrX:32910298-32910102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               48-243
               

               Cow position:
               chrX:35278512-35278326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               180, 57
               

               Conread position:
               48-245
               

               Cow position:
               chrX:16836093-16836291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               48-250
               

               Cow position:
               chrX:4289635-4289432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               48-250
               

               Cow position:
               chrX:42449812-42450027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               43, 150
               

               Conread position:
               48-251
               

               Cow position:
               chrX:22392787-22392995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               48-253
               

               Cow position:
               chrX:42836382-42836168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               48-258
               

               Cow position:
               chrX:42432313-42432533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               48-260
               

               Cow position:
               chrX:32330372-32330148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               48-267
               

               Cow position:
               chrX:3806879-3806654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               48-268
               

               Cow position:
               chrX:41941824-41941594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               48-270
               

               Cow position:
               chrX:27074850-27075081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               48-274
               

               Cow position:
               chrX:4645713-4645950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               48-277
               

               Cow position:
               chrX:11325907-11326142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               48-277
               

               Cow position:
               chrX:40108312-40108558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 229
               

               Conread position:
               48-281
               

               Cow position:
               chrX:19394756-19394506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               48-289
               

               Cow position:
               chrX:30840742-30840486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               48-293
               

               Cow position:
               chrX:27511622-27511367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               54, 141
               

               Conread position:
               48-293
               

               Cow position:
               chrX:39352973-39352720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               48-301
               

               Cow position:
               chrX:4109386-4109125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 150
               

               Conread position:
               48-305
               

               Cow position:
               chrX:4152843-4153107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               48-305
               

               Cow position:
               chrX:31294368-31294635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 152
               

               Conread position:
               48-306
               

               Cow position:
               chrX:1087947-1088209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               48-306
               

               Cow position:
               chrX:19469314-19469573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               48-306
               

               Cow position:
               chrX:27508823-27509096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               48-309
               

               Cow position:
               chrX:31729638-31729366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               48-312
               

               Cow position:
               chrX:4632653-4632928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 153
               

               Conread position:
               48-312
               

               Cow position:
               chrX:25815698-25815985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 150
               

               Conread position:
               48-312
               

               Cow position:
               chrX:32420412-32420141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 148
               

               Conread position:
               48-312
               

               Cow position:
               chrX:33001099-33000824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 142
               

               Conread position:
               48-312
               

               Cow position:
               chrX:36866374-36866092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               48-312
               

               Cow position:
               chrX:46770761-46771038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 150
               

               Conread position:
               48-313
               

               Cow position:
               chrX:28846691-28846961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 83
               

               Conread position:
               48-314
               

               Cow position:
               chrX:3654804-3654527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               48-314
               

               Cow position:
               chrX:8731295-8731006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 144
               

               Conread position:
               48-314
               

               Cow position:
               chrX:12309184-12309466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               44, 150
               

               Conread position:
               48-314
               

               Cow position:
               chrX:27446884-27446615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               48-314
               

               Cow position:
               chrX:31250591-31250306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 157
               

               Conread position:
               48-314
               

               Cow position:
               chrX:34554925-34554645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 156
               

               Conread position:
               48-314
               

               Cow position:
               chrX:41878736-41879013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               48-314
               

               Cow position:
               chrX:46532289-46532582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 160
               

               Conread position:
               48-317
               

               Cow position:
               chrX:45598407-45598685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               48-318
               

               Cow position:
               chrX:30962674-30962958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               48-319
               

               Cow position:
               chrX:4768929-4768657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               48-319
               

               Cow position:
               chrX:6559255-6559531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               48-319
               

               Cow position:
               chrX:8869203-8869490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               48-319
               

               Cow position:
               chrX:8925881-8925615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               179, 55
               

               Conread position:
               48-319
               

               Cow position:
               chrX:11633883-11633594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               48-319
               

               Cow position:
               chrX:27175201-27174910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               48-319
               

               Cow position:
               chrX:31489722-31489434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               41, 149
               

               Conread position:
               48-319
               

               Cow position:
               chrX:38218914-38218624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               48-319
               

               Cow position:
               chrX:38964298-38964018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               48-319
               

               Cow position:
               chrX:40680816-40680525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 150
               

               Conread position:
               48-321
               

               Cow position:
               chrX:21986100-21986380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               48-321
               

               Cow position:
               chrX:34314222-34313941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               53, 152
               

               Conread position:
               48-321
               

               Cow position:
               chrX:41871258-41870985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               48-321
               

               Cow position:
               chrX:42927629-42927907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               48-324
               

               Cow position:
               chrX:3580146-3579854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               48-324
               

               Cow position:
               chrX:4399319-4399038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               49, 110
               

               Conread position:
               48-324
               

               Cow position:
               chrX:5637978-5638256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               91, 79
               

               Conread position:
               48-324
               

               Cow position:
               chrX:6407745-6407458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 127
               

               Conread position:
               48-324
               

               Cow position:
               chrX:9201744-9201459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               10, 144
               

               Conread position:
               48-324
               

               Cow position:
               chrX:10516455-10516165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 150
               

               Conread position:
               48-324
               

               Cow position:
               chrX:11084873-11085147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               48-324
               

               Cow position:
               chrX:12095570-12095864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 150
               

               Conread position:
               48-324
               

               Cow position:
               chrX:12290919-12290637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               48-324
               

               Cow position:
               chrX:15546082-15545803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               48-324
               

               Cow position:
               chrX:25207660-25207932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 104
               

               Conread position:
               48-324
               

               Cow position:
               chrX:27145800-27145532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 144
               

               Conread position:
               48-324
               

               Cow position:
               chrX:29542027-29542310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               48-324
               

               Cow position:
               chrX:31436670-31436387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 144
               

               Conread position:
               48-324
               

               Cow position:
               chrX:33654642-33654932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               43, 150
               

               Conread position:
               48-324
               

               Cow position:
               chrX:34377140-34376856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               48-324
               

               Cow position:
               chrX:34504852-34505138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               48-324
               

               Cow position:
               chrX:35269057-35268791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               48-324
               

               Cow position:
               chrX:35543085-35542804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 148
               

               Conread position:
               48-324
               

               Cow position:
               chrX:36976153-36975861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 150
               

               Conread position:
               48-324
               

               Cow position:
               chrX:38560751-38560466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 59
               

               Conread position:
               48-324
               

               Cow position:
               chrX:40035238-40035533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 168
               

               Conread position:
               48-324
               

               Cow position:
               chrX:40685128-40685422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 148
               

               Conread position:
               48-324
               

               Cow position:
               chrX:41123246-41122977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               48-324
               

               Cow position:
               chrX:42246980-42247275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               48-324
               

               Cow position:
               chrX:44397212-44396928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               42, 113
               

               Conread position:
               48-324
               

               Cow position:
               chrX:46291342-46291047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 153
               

               Conread position:
               48-326
               

               Cow position:
               chrX:4403519-4403223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 292
               

               Conread position:
               48-326
               

               Cow position:
               chrX:24365621-24365918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               48-327
               

               Cow position:
               chrX:4991823-4992106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               48-327
               

               Cow position:
               chrX:13868905-13868609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               48-327
               

               Cow position:
               chrX:35885531-35885821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               48-327
               

               Cow position:
               chrX:40826549-40826845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               48-328
               

               Cow position:
               chrX:20152049-20151755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               48-328
               

               Cow position:
               chrX:34543987-34543694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 157
               

               Conread position:
               48-329
               

               Cow position:
               chrX:26881361-26881664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               48-329
               

               Cow position:
               chrX:27228330-27228032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               48-329
               

               Cow position:
               chrX:29601628-29601926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 148
               

               Conread position:
               48-329
               

               Cow position:
               chrX:34412049-34411746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               48-329
               

               Cow position:
               chrX:44055004-44054711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               42, 150
               

               Conread position:
               48-330
               

               Cow position:
               chrX:25035180-25035476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               48-331
               

               Cow position:
               chrX:44192241-44192541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               48-331
               

               Cow position:
               chrX:48237017-48236726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               48-336
               

               Cow position:
               chrX:36283541-36283253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 149
               

               Conread position:
               48-336
               

               Cow position:
               chrX:42855664-42855352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               48-339
               

               Cow position:
               chrX:9251962-9252268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               48-345
               

               Cow position:
               chrX:1466364-1466050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 150
               

               Conread position:
               49-208
               

               Cow position:
               chrX:48822142-48822310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               39, 148
               

               Conread position:
               49-211
               

               Cow position:
               chrX:11781447-11781282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 141
               

               Conread position:
               49-291
               

               Cow position:
               chrX:1360282-1360028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               59, 218
               

               Conread position:
               49-318
               

               Cow position:
               chrX:15006959-15007234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               49-325
               

               Cow position:
               chrX:38549646-38549355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               49-330
               

               Cow position:
               chrX:4268870-4269158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 191
               

               Conread position:
               50-175
               

               Cow position:
               chrX:3494851-3494981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               41, 108
               

               Conread position:
               50-181
               

               Cow position:
               chrX:23497498-23497633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               50-192
               

               Cow position:
               chrX:41166630-41166778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               50-194
               

               Cow position:
               chrX:37867632-37867477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               50-200
               

               Cow position:
               chrX:27415389-27415540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               50-208
               

               Cow position:
               chrX:36722614-36722773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               76, 138
               

               Conread position:
               50-215
               

               Cow position:
               chrX:16763731-16763902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               50-221
               

               Cow position:
               chrX:908140-907965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               50-226
               

               Cow position:
               chrX:23089037-23088870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               50-231
               

               Cow position:
               chrX:16323816-16324006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               50-231
               

               Cow position:
               chrX:35285373-35285181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               50-233
               

               Cow position:
               chrX:19018629-19018825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               47, 150
               

               Conread position:
               50-239
               

               Cow position:
               chrX:11762812-11763001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               50-239
               

               Cow position:
               chrX:13122143-13121938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 153
               

               Conread position:
               50-239
               

               Cow position:
               chrX:20677948-20678138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               50-239
               

               Cow position:
               chrX:29478921-29478724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 123
               

               Conread position:
               50-244
               

               Cow position:
               chrX:38587643-38587848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 148
               

               Conread position:
               50-250
               

               Cow position:
               chrX:14275549-14275752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               50-251
               

               Cow position:
               chrX:24633893-24633673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 157
               

               Conread position:
               50-271
               

               Cow position:
               chrX:17956888-17956660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               50-294
               

               Cow position:
               chrX:7648214-7648462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               50-296
               

               Cow position:
               chrX:126955-126706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               50-303
               

               Cow position:
               chrX:4825649-4825890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               50-303
               

               Cow position:
               chrX:34565484-34565211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               50-313
               

               Cow position:
               chrX:13924060-13923792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               50-314
               

               Cow position:
               chrX:11856601-11856348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               167, 39
               

               Conread position:
               50-314
               

               Cow position:
               chrX:47246560-47246828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 128
               

               Conread position:
               50-319
               

               Cow position:
               chrX:10831282-10831579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               50-319
               

               Cow position:
               chrX:20881762-20882023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               178, 54
               

               Conread position:
               50-319
               

               Cow position:
               chrX:34222912-34222628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               50-319
               

               Cow position:
               chrX:34441254-34441537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 148
               

               Conread position:
               50-321
               

               Cow position:
               chrX:11938754-11939015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               139, 59
               

               Conread position:
               50-324
               

               Cow position:
               chrX:1499853-1499576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               50-324
               

               Cow position:
               chrX:1503506-1503247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               50-324
               

               Cow position:
               chrX:1615859-1616135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 31
               

               Conread position:
               50-324
               

               Cow position:
               chrX:6544444-6544165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               50-324
               

               Cow position:
               chrX:11656277-11656001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               50-324
               

               Cow position:
               chrX:12250014-12249712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               50-324
               

               Cow position:
               chrX:14973558-14973831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               50-324
               

               Cow position:
               chrX:20584511-20584233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               167, 39
               

               Conread position:
               50-324
               

               Cow position:
               chrX:22074995-22074709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               50-324
               

               Cow position:
               chrX:27705786-27705496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 147
               

               Conread position:
               50-324
               

               Cow position:
               chrX:30420768-30421020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               50-324
               

               Cow position:
               chrX:36356303-36356024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               50-324
               

               Cow position:
               chrX:37119774-37119503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               50-324
               

               Cow position:
               chrX:39126505-39126241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               178, 38
               

               Conread position:
               50-324
               

               Cow position:
               chrX:41068919-41068630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               50-324
               

               Cow position:
               chrX:46072631-46072911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               50-325
               

               Cow position:
               chrX:27261390-27261096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               50-326
               

               Cow position:
               chrX:21672761-21672464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               67, 214
               

               Conread position:
               50-327
               

               Cow position:
               chrX:152104-151811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               50-328
               

               Cow position:
               chrX:40567804-40567512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               51-169
               

               Cow position:
               chrX:39094132-39094252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               51-180
               

               Cow position:
               chrX:11602286-11602424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               51-181
               

               Cow position:
               chrX:17525676-17525809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               51-212
               

               Cow position:
               chrX:42331474-42331312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               51-221
               

               Cow position:
               chrX:32877178-32877356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 145
               

               Conread position:
               51-224
               

               Cow position:
               chrX:32747923-32747744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               51-232
               

               Cow position:
               chrX:19717712-19717529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               51-239
               

               Cow position:
               chrX:14985964-14986151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               51-240
               

               Cow position:
               chrX:35658995-35658799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 138
               

               Conread position:
               51-306
               

               Cow position:
               chrX:45110849-45110583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               51-316
               

               Cow position:
               chrX:34792122-34792391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               51-321
               

               Cow position:
               chrX:13647586-13647873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 154
               

               Conread position:
               51-324
               

               Cow position:
               chrX:161601-161322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               51-324
               

               Cow position:
               chrX:7722175-7721898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               176, 56
               

               Conread position:
               51-324
               

               Cow position:
               chrX:9634991-9635272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 140
               

               Conread position:
               51-324
               

               Cow position:
               chrX:9650829-9651116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 139
               

               Conread position:
               51-324
               

               Cow position:
               chrX:13177283-13177556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 141
               

               Conread position:
               51-324
               

               Cow position:
               chrX:20168756-20168467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 146
               

               Conread position:
               51-324
               

               Cow position:
               chrX:21593490-21593197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               51-324
               

               Cow position:
               chrX:34836873-34837145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 139
               

               Conread position:
               51-324
               

               Cow position:
               chrX:37956046-37955742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               51-324
               

               Cow position:
               chrX:41674298-41674019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 141
               

               Conread position:
               51-324
               

               Cow position:
               chrX:43730031-43730309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               51-325
               

               Cow position:
               chrX:6488763-6488485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               51-329
               

               Cow position:
               chrX:27431723-27432010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               51-347
               

               Cow position:
               chrX:41238164-41238467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 131
               

               Conread position:
               52-321
               

               Cow position:
               chrX:41270795-41271086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               52-327
               

               Cow position:
               chrX:46588017-46587726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               53-212
               

               Cow position:
               chrX:46910006-46909843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               53-231
               

               Cow position:
               chrX:26205258-26205440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               53-234
               

               Cow position:
               chrX:1719304-1719120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               53-271
               

               Cow position:
               chrX:23188593-23188812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               48, 135
               

               Conread position:
               53-314
               

               Cow position:
               chrX:45875588-45875312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               53-316
               

               Cow position:
               chrX:15147001-15147270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 140
               

               Conread position:
               53-324
               

               Cow position:
               chrX:31442643-31442912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               53-327
               

               Cow position:
               chrX:38094328-38094614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 133
               

               Conread position:
               54-319
               

               Cow position:
               chrX:21328109-21327820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               55-236
               

               Cow position:
               chrX:39180039-39180230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               55-314
               

               Cow position:
               chrX:44961948-44961668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               55-318
               

               Cow position:
               chrX:20887451-20887724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 138
               

               Conread position:
               55-330
               

               Cow position:
               chrX:20339699-20339986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               56-260
               

               Cow position:
               chrX:32318494-32318280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               56-319
               

               Cow position:
               chrX:48385186-48385443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               57-187
               

               Cow position:
               chrX:40543336-40543469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               57-212
               

               Cow position:
               chrX:31373720-31373564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               57-215
               

               Cow position:
               chrX:37062402-37062560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               57-226
               

               Cow position:
               chrX:40531861-40532029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               57-237
               

               Cow position:
               chrX:36848393-36848575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               57-245
               

               Cow position:
               chrX:31829277-31829465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               57-314
               

               Cow position:
               chrX:40480683-40480949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               57-319
               

               Cow position:
               chrX:27393842-27394106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               57-324
               

               Cow position:
               chrX:616074-616353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 133
               

               Conread position:
               57-324
               

               Cow position:
               chrX:40269674-40269397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               57-327
               

               Cow position:
               chrX:16348389-16348661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               58-188
               

               Cow position:
               chrX:28923212-28923080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               58-258
               

               Cow position:
               chrX:17966524-17966322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 131
               

               Conread position:
               58-314
               

               Cow position:
               chrX:35413789-35413539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               58-317
               

               Cow position:
               chrX:23113474-23113194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               58-318
               

               Cow position:
               chrX:31252599-31252333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               58-324
               

               Cow position:
               chrX:30133129-30133411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               58, 137
               

               Conread position:
               58-324
               

               Cow position:
               chrX:45968337-45968069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 136
               

               Conread position:
               59-205
               

               Cow position:
               chrX:27270563-27270410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               59-316
               

               Cow position:
               chrX:45099312-45099042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               59-317
               

               Cow position:
               chrX:6265417-6265683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               59-319
               

               Cow position:
               chrX:28865814-28866085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 136
               

               Conread position:
               59-330
               

               Cow position:
               chrX:4515877-4515588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               60-324
               

               Cow position:
               chrX:34532708-34532430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               60-329
               

               Cow position:
               chrX:38853379-38853102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               61-313
               

               Cow position:
               chrX:18694755-18695004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               61-324
               

               Cow position:
               chrX:32821208-32820939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               61-335
               

               Cow position:
               chrX:32977907-32978178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               62-321
               

               Cow position:
               chrX:42171118-42171384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               64-199
               

               Cow position:
               chrX:45481276-45481414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               65-267
               

               Cow position:
               chrX:10305178-10305379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               65-312
               

               Cow position:
               chrX:44656778-44657040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               65-324
               

               Cow position:
               chrX:29194404-29194143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               66-176
               

               Cow position:
               chrX:16481395-16481507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               66-192
               

               Cow position:
               chrX:7107676-7107549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 8
               

               Conread position:
               66-212
               

               Cow position:
               chrX:23574827-23574683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               66-316
               

               Cow position:
               chrX:17726151-17725891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               66-324
               

               Cow position:
               chrX:29050426-29050156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               66-324
               

               Cow position:
               chrX:29680087-29680351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               66-324
               

               Cow position:
               chrX:37129444-37129178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               66-324
               

               Cow position:
               chrX:37780928-37781202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               68-319
               

               Cow position:
               chrX:11614866-11614614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               68-324
               

               Cow position:
               chrX:17795161-17794892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               68-324
               

               Cow position:
               chrX:43115330-43115061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 126
               

               Conread position:
               74-324
               

               Cow position:
               chrX:37232575-37232322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               75-215
               

               Cow position:
               chrX:18637654-18637514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               75-313
               

               Cow position:
               chrX:24331946-24331699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               75-317
               

               Cow position:
               chrX:24287768-24288009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               76-317
               

               Cow position:
               chrX:6278330-6278584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 116
               

               Conread position:
               78-319
               

               Cow position:
               chrX:39558187-39558436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 31
               

               Conread position:
               79-324
               

               Cow position:
               chrX:43568085-43567831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 121
               

               Conread position:
               80-210
               

               Cow position:
               chrX:4612722-4612852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               80-302
               

               Cow position:
               chrX:19097059-19097291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               80-314
               

               Cow position:
               chrX:16575274-16575042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               80-320
               

               Cow position:
               chrX:42380949-42381187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               81-317
               

               Cow position:
               chrX:47481955-47481718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               81-319
               

               Cow position:
               chrX:11073030-11073275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               81-319
               

               Cow position:
               chrX:30543128-30543374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               83-319
               

               Cow position:
               chrX:41027318-41027070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               83-324
               

               Cow position:
               chrX:42873544-42873303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               87-179
               

               Cow position:
               chrX:23182827-23182923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               87-202
               

               Cow position:
               chrX:29688023-29688137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               87-208
               

               Cow position:
               chrX:27667580-27667457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               87-210
               

               Cow position:
               chrX:23860840-23860964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               87-210
               

               Cow position:
               chrX:40649050-40648926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               87-211
               

               Cow position:
               chrX:11181043-11181167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               87-218
               

               Cow position:
               chrX:40355186-40355057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               87-226
               

               Cow position:
               chrX:23266569-23266429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               87-226
               

               Cow position:
               chrX:35985972-35985834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               87-230
               

               Cow position:
               chrX:6599627-6599772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               87-233
               

               Cow position:
               chrX:24170575-24170723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               87-233
               

               Cow position:
               chrX:42506078-42506221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               87-236
               

               Cow position:
               chrX:6222974-6223125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               87-255
               

               Cow position:
               chrX:18046551-18046386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               87-285
               

               Cow position:
               chrX:18964675-18964876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               87-290
               

               Cow position:
               chrX:31626824-31627038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               87-293
               

               Cow position:
               chrX:21665087-21665299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               87-295
               

               Cow position:
               chrX:23562012-23561799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               87-303
               

               Cow position:
               chrX:17888268-17888488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               87-312
               

               Cow position:
               chrX:22115163-22115396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               87-314
               

               Cow position:
               chrX:7278066-7277835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               87-314
               

               Cow position:
               chrX:20697456-20697685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               87-317
               

               Cow position:
               chrX:42492369-42492597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               87-319
               

               Cow position:
               chrX:9365521-9365761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               87-319
               

               Cow position:
               chrX:15815236-15815001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               87-324
               

               Cow position:
               chrX:7718987-7718765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               87-324
               

               Cow position:
               chrX:12979679-12979918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               87-324
               

               Cow position:
               chrX:13382478-13382239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               87-324
               

               Cow position:
               chrX:14599687-14599442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               87-324
               

               Cow position:
               chrX:23513867-23514106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               140, 39
               

               Conread position:
               87-324
               

               Cow position:
               chrX:34402161-34401907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               87-324
               

               Cow position:
               chrX:34503075-34502831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               87-324
               

               Cow position:
               chrX:37489873-37489637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               87-324
               

               Cow position:
               chrX:40557523-40557772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               87-324
               

               Cow position:
               chrX:41526374-41526612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               87-325
               

               Cow position:
               chrX:11717628-11717881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               87-327
               

               Cow position:
               chrX:28878019-28878262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               87-327
               

               Cow position:
               chrX:45113775-45113526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               87-328
               

               Cow position:
               chrX:23785801-23785567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               87-330
               

               Cow position:
               chrX:7710383-7710634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               6, 110
               

               Conread position:
               88-189
               

               Cow position:
               chrX:25282885-25282988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               88-207
               

               Cow position:
               chrX:44754231-44754347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               88-258
               

               Cow position:
               chrX:25412059-25411886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               88-277
               

               Cow position:
               chrX:6259996-6260190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               88-290
               

               Cow position:
               chrX:23092027-23091811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               88-314
               

               Cow position:
               chrX:18204311-18204542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               88-320
               

               Cow position:
               chrX:878226-878464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               14, 108
               

               Conread position:
               88-324
               

               Cow position:
               chrX:5118345-5118593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               88-324
               

               Cow position:
               chrX:6690108-6690346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               88-324
               

               Cow position:
               chrX:8797403-8797162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               88-333
               

               Cow position:
               chrX:7351449-7351201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               89-211
               

               Cow position:
               chrX:29562933-29563053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               89-267
               

               Cow position:
               chrX:23498527-23498709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               89-322
               

               Cow position:
               chrX:4043714-4043943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               89-324
               

               Cow position:
               chrX:31312182-31311938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               89-331
               

               Cow position:
               chrX:38226957-38227191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               89-335
               

               Cow position:
               chrX:29549399-29549650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               90-250
               

               Cow position:
               chrX:29733441-29733603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               90-299
               

               Cow position:
               chrX:15820744-15820531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               90-313
               

               Cow position:
               chrX:39220229-39220000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               90-319
               

               Cow position:
               chrX:23562784-23562549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               12, 107
               

               Conread position:
               90-319
               

               Cow position:
               chrX:38728886-38728652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               90-324
               

               Cow position:
               chrX:22387098-22387333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               90-324
               

               Cow position:
               chrX:33640125-33639884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               90-324
               

               Cow position:
               chrX:41884260-41884505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               90-327
               

               Cow position:
               chrX:46433642-46433397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               90-329
               

               Cow position:
               chrX:5872469-5872225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               91-221
               

               Cow position:
               chrX:10076122-10075992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 98
               

               Conread position:
               91-304
               

               Cow position:
               chrX:22914891-22915107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               91-324
               

               Cow position:
               chrX:5679421-5679656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               92-305
               

               Cow position:
               chrX:25037137-25036915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               93-317
               

               Cow position:
               chrX:42235376-42235612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               93-324
               

               Cow position:
               chrX:37910591-37910355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               94-347
               

               Cow position:
               chrX:5900610-5900355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               96-289
               

               Cow position:
               chrX:32623716-32623511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               97-319
               

               Cow position:
               chrX:39415226-39415453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               97-324
               

               Cow position:
               chrX:7695893-7695658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               98-260
               

               Cow position:
               chrX:20743747-20743579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               98-314
               

               Cow position:
               chrX:29121190-29120965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               99-239
               

               Cow position:
               chrX:38722264-38722121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               99-322
               

               Cow position:
               chrX:22822188-22821961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               100-293
               

               Cow position:
               chrX:25788763-25788956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               100-303
               

               Cow position:
               chrX:10959254-10959467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               100-324
               

               Cow position:
               chrX:7646397-7646165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               101-271
               

               Cow position:
               chrX:29553425-29553250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               101-293
               

               Cow position:
               chrX:46429679-46429881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               101-302
               

               Cow position:
               chrX:29289718-29289510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               101-324
               

               Cow position:
               chrX:17662458-17662684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               102-271
               

               Cow position:
               chrX:19943097-19943272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               102-312
               

               Cow position:
               chrX:45883832-45884054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 96
               

               Conread position:
               102-313
               

               Cow position:
               chrX:36514753-36514974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               103-233
               

               Cow position:
               chrX:37665826-37665697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               103-319
               

               Cow position:
               chrX:33204831-33205050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               103-331
               

               Cow position:
               chrX:47054387-47054625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               104-320
               

               Cow position:
               chrX:10411847-10412072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               105-311
               

               Cow position:
               chrX:917232-917443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               105-324
               

               Cow position:
               chrX:11082486-11082705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               107-210
               

               Cow position:
               chrX:6850344-6850239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               109-324
               

               Cow position:
               chrX:7162188-7161969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               109-324
               

               Cow position:
               chrX:29230131-29229919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               110-324
               

               Cow position:
               chrX:1514288-1514497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               110-324
               

               Cow position:
               chrX:42469810-42470032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 170
               

               Conread position:
               113-334
               

               Cow position:
               chrX:11454921-11455149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               124-331
               

               Cow position:
               chrX:19690330-19690132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               125, 63
               

               Conread position:
               125-225
               

               Cow position:
               chrX:6213984-6213885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               125-277
               

               Cow position:
               chrX:29115819-29115669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               125-314
               

               Cow position:
               chrX:38936814-38936616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               125-324
               

               Cow position:
               chrX:26625557-26625761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 62
               

               Conread position:
               125-327
               

               Cow position:
               chrX:45403711-45403921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               126-321
               

               Cow position:
               chrX:7572018-7571815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               126-324
               

               Cow position:
               chrX:21004797-21004591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               91, 61
               

               Conread position:
               126-324
               

               Cow position:
               chrX:21566520-21566312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               128-299
               

               Cow position:
               chrX:41111827-41111655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               130-327
               

               Cow position:
               chrX:23563682-23563884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 63
               

               Conread position:
               130-327
               

               Cow position:
               chrX:27945945-27946150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               130-327
               

               Cow position:
               chrX:34662737-34662941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               130-337
               

               Cow position:
               chrX:10859202-10859402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               134-327
               

               Cow position:
               chrX:31948830-31949027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               134-329
               

               Cow position:
               chrX:27680503-27680303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               137-330
               

               Cow position:
               chrX:4296723-4296916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               138-328
               

               Cow position:
               chrX:22813163-22812973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               139-319
               

               Cow position:
               chrX:2467984-2467800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               139-324
               

               Cow position:
               chrX:27685349-27685157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               140-329
               

               Cow position:
               chrX:17949394-17949581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 53
               

               Conread position:
               143-324
               

               Cow position:
               chrX:26440689-26440869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               146-321
               

               Cow position:
               chrX:37843810-37843635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               151-319
               

               Cow position:
               chrX:1572051-1572223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               151-319
               

               Cow position:
               chrX:12405293-12405469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               158-324
               

               Cow position:
               chrX:19003374-19003209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               160-324
               

               Cow position:
               chrX:11589509-11589678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               187-324
               

               Cow position:
               chrX:28845886-28845740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               187-327
               

               Cow position:
               chrX:36961694-36961549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               188-317
               

               Cow position:
               chrX:42875035-42874900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               197-319
               

               Cow position:
               chrX:40648029-40647900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-329
Cow position:	chrX:43527753-43527415 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	234
Alignm E-value:	9e-38
Alignm gaps (pig, cow):	9, 67
Conread position:	16-244
Cow position:	chrX:12191988-12191756 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	164
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	12, 24
Conread position:	16-338
Cow position:	chrX:41192937-41192601 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	219
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	11, 187
Conread position:	17-221
Cow position:	chrX:32235514-32235723 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	152
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	13, 23
Conread position:	47-228
Cow position:	chrX:47061589-47061408 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	128
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	79, 52
Conread position:	47-236
Cow position:	chrX:4327981-4328180 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	150
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	51, 150
Conread position:	48-163
Cow position:	chrX:1571395-1571513 (view UCSC Genome Browser custom track)
Alignm length:	119
Alignm identity:	95
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	56, 0
Conread position:	48-179
Cow position:	chrX:11589166-11589307 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	111
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	40, 0
Conread position:	48-184
Cow position:	chrX:41199423-41199279 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	111
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	51, 0
Conread position:	48-188
Cow position:	chrX:42539748-42539610 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	111
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	55, 43
Conread position:	48-196
Cow position:	chrX:12944-12793 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	119
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	53, 100
Conread position:	48-197
Cow position:	chrX:8759824-8759668 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	125
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	43, 113
Conread position:	48-201
Cow position:	chrX:30824186-30824028 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	123
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	46, 145
Conread position:	48-203
Cow position:	chrX:16556022-16556180 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	120
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	41, 96
Conread position:	48-207
Cow position:	chrX:17498524-17498355 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	130
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	44, 149
Conread position:	48-208
Cow position:	chrX:8327106-8326936 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	126
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	43, 150
Conread position:	48-209
Cow position:	chrX:19795308-19795472 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	131
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	41, 89
Conread position:	48-210
Cow position:	chrX:2551278-2551121 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	133
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	78, 45
Conread position:	48-211
Cow position:	chrX:2314417-2314590 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	136
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	44, 150
Conread position:	48-212
Cow position:	chrX:44995701-44995526 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	131
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	39, 150