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Cow genome map

           
Conread name:
           
Pig2-106O01
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr13:14576921-14576775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr13:21524680-21524523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr13:15740321-15740151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr13:35533079-35532917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:42114276-42113941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 207
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr13:20605864-20606200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 186
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr13:58043883-58043545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr13:15958876-15958524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr13:30651430-30651098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr13:33875917-33875585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:12045086-12045429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:17613601-17613249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 228
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:61047461-61047116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20814025-20814375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20816568-20816218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr13:34508131-34507773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 226
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:152197-151848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:12574889-12574520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 251
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:12670190-12670566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:43138974-43139329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
160, 132
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr13:20563253-20562873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 229
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr13:15041217-15041599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:10928735-10929116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:19882781-19883164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:20378086-20378448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:25434874-25435251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:25537896-25537495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:50690137-50690525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 230
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:41807030-41806643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr13:52894397-52894018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:20174994-20174611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:12408029-12408418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 380
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:25817768-25817396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:38562199-38561812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:52057796-52057426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr13:60974330-60973949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr13:31814122-31813742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr13:10988819-10989204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 224
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr13:30798977-30798588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr13:8609296-8609685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr13:13089278-13088892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 164
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:2774376-2773987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:8362491-8362883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 181
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:18166985-18166592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:20666133-20666526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:21276110-21275719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 223
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:32283382-32282988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:37382066-37381661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 235
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr13:25695513-25695917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 204
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr13:1042701-1043119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 361
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr13:12875730-12876131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr13:18244110-18243777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:1155454-1155804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr13:20784842-20784462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:6616494-6616899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
24, 207
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr13:15288671-15289061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr13:20820588-20820913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr13:8202632-8202956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr13:45604165-45604506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 188
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr13:51940982-51940607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr13:54095057-54094682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr13:60429826-60430206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr13:26261541-26261918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 228
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr13:20649734-20650113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr13:43762420-43762033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr13:60967017-60966629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr13:33168528-33168696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr13:23166845-23167216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 222
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr13:11061236-11060857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
4-376
               

               
Cow position:
               
chr13:14063276-14063654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
149, 118
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr13:23479281-23478890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr13:44626631-44626287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 262
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr13:54237592-54237339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 119
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr13:34263127-34263489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr13:1231898-1231510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 222
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr13:25927042-25926659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 200
               

               
Conread position:
               
6-382
               

               
Cow position:
               
chr13:9265568-9265966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr13:8201237-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 199
               

               
Conread position:
               
8-372
               

               
Cow position:
               
chr13:21176076-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr13:13501374-13501748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr13:11460871-11460499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr13:23856461-23856071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr13:19610339-19610695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
20-378
               

               
Cow position:
               
chr13:36771191-36771556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
21-257
               

               
Cow position:
               
chr13:48251760-48251990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
21-370
               

               
Cow position:
               
chr13:20879603-20879952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr13:55673973-55674338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 206
               

               
Conread position:
               
21-373
               

               
Cow position:
               
chr13:20705971-20706336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
21-382
               

               
Cow position:
               
chr13:12448758-12449126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
21-394
               

               
Cow position:
               
chr13:42200850-42200467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
22-398
               

               
Cow position:
               
chr13:45022977-45023362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 181
               

               
Conread position:
               
25-271
               

               
Cow position:
               
chr13:11147533-11147275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
25-325
               

               
Cow position:
               
chr13:46324564-46324871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
25-358
               

               
Cow position:
               
chr13:17745466-17745133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
131, 162
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr13:20839794-20839438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
27-372
               

               
Cow position:
               
chr13:20497877-20497516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
28-359
               

               
Cow position:
               
chr13:13176873-13176534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
28-370
               

               
Cow position:
               
chr13:19364468-19364112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 195
               

               
Conread position:
               
28-373
               

               
Cow position:
               
chr13:21241868-21242215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
28-373
               

               
Cow position:
               
chr13:34261456-34261100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
128, 102
               

               
Conread position:
               
28-373
               

               
Cow position:
               
chr13:55315965-55316328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
28-374
               

               
Cow position:
               
chr13:43919031-43919393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
28-377
               

               
Cow position:
               
chr13:12207267-12206913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr13:7076480-7076117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr13:37818536-37818891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
28-387
               

               
Cow position:
               
chr13:15192670-15193031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
29-358
               

               
Cow position:
               
chr13:46736424-46736101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
29-369
               

               
Cow position:
               
chr13:15281715-15282062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
30-315
               

               
Cow position:
               
chr13:24376712-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
30-358
               

               
Cow position:
               
chr13:10845815-10845489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 263
               

               
Conread position:
               
31-327
               

               
Cow position:
               
chr13:59687658-59687962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 193
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr13:8524401-8524720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
31-370
               

               
Cow position:
               
chr13:54344997-54344653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 197
               

               
Conread position:
               
31-381
               

               
Cow position:
               
chr13:4664641-4664995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 195
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr13:25547373-25547722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
31-394
               

               
Cow position:
               
chr13:5263065-5263432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
31-394
               

               
Cow position:
               
chr13:13320997-13320644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
326, 39
               

               
Conread position:
               
31-394
               

               
Cow position:
               
chr13:43184652-43185030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr13:2339650-2339430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 186
               

               
Conread position:
               
32-358
               

               
Cow position:
               
chr13:6060787-6061123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 169
               

               
Conread position:
               
32-373
               

               
Cow position:
               
chr13:9643662-9644011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
76, 195
               

               
Conread position:
               
32-381
               

               
Cow position:
               
chr13:18491814-18491457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
32-382
               

               
Cow position:
               
chr13:2414246-2413889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr13:18172559-18172205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
36-373
               

               
Cow position:
               
chr13:37804095-37803760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
38-344
               

               
Cow position:
               
chr13:52227886-52228201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 117
               

               
Conread position:
               
38-382
               

               
Cow position:
               
chr13:15257164-15257507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 135
               

               
Conread position:
               
42-394
               

               
Cow position:
               
chr13:6974370-6974009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
43-377
               

               
Cow position:
               
chr13:37775017-37775341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
45-387
               

               
Cow position:
               
chr13:19223856-19223510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 200
               

               
Conread position:
               
47-373
               

               
Cow position:
               
chr13:19022483-19022140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr13:9593711-9593427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
48-357
               

               
Cow position:
               
chr13:48598108-48597795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr13:37592734-37593087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 180
               

               
Conread position:
               
51-333
               

               
Cow position:
               
chr13:61188736-61188443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr13:61990133-61990464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr13:23512552-23512252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr13:8652244-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 165
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr13:15110515-15110166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr13:7032482-7032214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr13:26369717-26369384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
103, 262
               

               
Conread position:
               
61-429
               

               
Cow position:
               
chr13:21283515-21283893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
62-381
               

               
Cow position:
               
chr13:15195019-15195342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
62-390
               

               
Cow position:
               
chr13:9846264-9846610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr13:14771650-14771324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
65-326
               

               
Cow position:
               
chr13:55583386-55583112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 160
               

               
Conread position:
               
69-387
               

               
Cow position:
               
chr13:11644116-11643794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
70-327
               

               
Cow position:
               
chr13:49022688-49022952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
70-372
               

               
Cow position:
               
chr13:19188486-19188171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
70-382
               

               
Cow position:
               
chr13:52055414-52055732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
71-368
               

               
Cow position:
               
chr13:5758164-5758469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
74-372
               

               
Cow position:
               
chr13:49824205-49823897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
80-358
               

               
Cow position:
               
chr13:20473515-20473797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
89-326
               

               
Cow position:
               
chr13:28689633-28689384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
89-358
               

               
Cow position:
               
chr13:15903180-15902909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
91-373
               

               
Cow position:
               
chr13:54583037-54582743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
99-334
               

               
Cow position:
               
chr13:52929862-52929620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
101-371
               

               
Cow position:
               
chr13:37640737-37640461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
104-333
               

               
Cow position:
               
chr13:13238725-13238487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 228
               

               
Conread position:
               
105-373
               

               
Cow position:
               
chr13:18696989-18696710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 242
               

               
Conread position:
               
105-374
               

               
Cow position:
               
chr13:54388874-54389153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
108-368
               

               
Cow position:
               
chr13:17966065-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr13:28552739-28552461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
109-372
               

               
Cow position:
               
chr13:20360413-20360149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr13:49520680-49520953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
113-382
               

               
Cow position:
               
chr13:51115889-51116165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
165-382
               

               
Cow position:
               
chr13:40491294-40491074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr13:17563798-17563600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr13:17838008-17837811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
195-374
               

               
Cow position:
               
chr13:43829293-43829112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
196-382
               

               
Cow position:
               
chr13:52640902-52641088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr13:51856842-51857023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
212-382
               

               
Cow position:
               
chr13:41157437-41157265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               
Show alignments to all cow chromosomes.