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Cow genome map

           
Conread name:
           
Pig2-106O01
        

               
Conread position:
               
1-326
               

               
Cow position:
               
chr16:675224-675559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr16:30290046-30290377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr16:42970201-42969857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr16:18141599-18141257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 226
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:39646290-39646616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:46752549-46752200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr16:34168325-34168662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
25, 188
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:11775321-11774956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 228
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:35243184-35243540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 175
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:22129940-22129579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr16:52789792-52790151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr16:39474408-39474047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:8448932-8448542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 240
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr16:1549144-1548764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 225
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr16:42242388-42242004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr16:45731642-45731278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr16:28833572-28833958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr16:35757944-35758318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:13698238-13698631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:15762433-15762040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 206
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:24128431-24128820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:28922519-28922889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:29158862-29159236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:50906199-50906593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:9973772-9973382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 256
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:13579113-13578744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:15824708-15824327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr16:21450578-21450964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr16:48096033-48095647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr16:33645744-33646135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:13689393-13689792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 202
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:15370410-15370812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:15960564-15960164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 228
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:29766074-29766452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:48087140-48086744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 220
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr16:51598872-51598487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr16:18354221-18353828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr16:53509258-53508845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr16:53627693-53627286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr16:38663981-38663566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr16:600676-601014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 243
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr16:40333590-40333209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
106, 220
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr16:48494825-48494437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr16:4626663-4626271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 212
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr16:10040106-10039721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr16:13611714-13611329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:44744400-44744057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr16:23737916-23738294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr16:8315441-8315079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr16:9497541-9497150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr16:56832008-56831624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr16:4399453-4399858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 239
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr16:17142670-17143058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr16:18758102-18757713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:27701513-27701123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr16:14758471-14758876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr16:18205704-18206073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr16:7665363-7665753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 229
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr16:53086591-53086224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr16:16548348-16548726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr16:571182-570803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr16:16402594-16402216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 229
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr16:22919234-22919589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr16:12633637-12634011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
160, 33
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr16:14106379-14106763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr16:44210813-44210432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
167, 81
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr16:46552552-46552935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr16:30515846-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr16:50189855-50189590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr16:54287612-54287920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr16:11008083-11008412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr16:23871915-23871538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 242
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr16:17745569-17745951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr16:49169647-49169264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr16:40561961-40562363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr16:39417373-39417096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
149, 31
               

               
Conread position:
               
7-376
               

               
Cow position:
               
chr16:25170127-25170511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr16:23483025-23483373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr16:8026106-8025738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
8-382
               

               
Cow position:
               
chr16:33054727-33054355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr16:24023561-24023229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
9-382
               

               
Cow position:
               
chr16:45813954-45813573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
19-333
               

               
Cow position:
               
chr16:594480-594148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
20-361
               

               
Cow position:
               
chr16:30096377-30096031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 204
               

               
Conread position:
               
20-373
               

               
Cow position:
               
chr16:51696849-51697202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
20-374
               

               
Cow position:
               
chr16:14568732-14568371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
20-388
               

               
Cow position:
               
chr16:5256755-5257128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr16:47620133-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 206
               

               
Conread position:
               
21-303
               

               
Cow position:
               
chr16:22868421-22868130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 183
               

               
Conread position:
               
21-324
               

               
Cow position:
               
chr16:35195857-35195546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 140
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr16:13752370-13752055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
21-370
               

               
Cow position:
               
chr16:22850082-22850439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
143, 232
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr16:39164999-39165355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
21-373
               

               
Cow position:
               
chr16:4699216-4698873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 80
               

               
Conread position:
               
21-382
               

               
Cow position:
               
chr16:5363645-5364027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
21-382
               

               
Cow position:
               
chr16:11806435-11806798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
25-376
               

               
Cow position:
               
chr16:42339963-42340316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 82
               

               
Conread position:
               
27-358
               

               
Cow position:
               
chr16:11615468-11615144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
149, 74
               

               
Conread position:
               
28-326
               

               
Cow position:
               
chr16:32586960-32587273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 229
               

               
Conread position:
               
28-358
               

               
Cow position:
               
chr16:56231584-56231928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 322
               

               
Conread position:
               
28-362
               

               
Cow position:
               
chr16:16597323-16597663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 196
               

               
Conread position:
               
28-367
               

               
Cow position:
               
chr16:45703215-45702861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
28-369
               

               
Cow position:
               
chr16:56875892-56875552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
93, 170
               

               
Conread position:
               
28-372
               

               
Cow position:
               
chr16:238022-238383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 199
               

               
Conread position:
               
28-373
               

               
Cow position:
               
chr16:47518611-47518963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
28-373
               

               
Cow position:
               
chr16:48340931-48340577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr16:2223646-2223271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr16:29608279-29608635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr16:36203854-36203492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr16:56082599-56082239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 195
               

               
Conread position:
               
30-365
               

               
Cow position:
               
chr16:11103062-11102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
30-382
               

               
Cow position:
               
chr16:20025207-20025566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
31-257
               

               
Cow position:
               
chr16:14028851-14028629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
31-358
               

               
Cow position:
               
chr16:5636356-5636685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr16:35623481-35623134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr16:8812323-8811979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr16:29655090-29655442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr16:23472515-23472873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr16:37452850-37452488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
32-356
               

               
Cow position:
               
chr16:9728969-9729294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
32-373
               

               
Cow position:
               
chr16:4192655-4192317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 186
               

               
Conread position:
               
32-373
               

               
Cow position:
               
chr16:25839382-25839737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr16:4902367-4902708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
32-380
               

               
Cow position:
               
chr16:26649869-26649505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
32-382
               

               
Cow position:
               
chr16:4857325-4856976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
33-318
               

               
Cow position:
               
chr16:29823160-29822875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr16:39695711-39695392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr16:8933654-8933311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr16:37380038-37380346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr16:10148048-10148402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
35-333
               

               
Cow position:
               
chr16:2396095-2396390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
35-337
               

               
Cow position:
               
chr16:33791076-33790758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 200
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr16:32302218-32301890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
38-398
               

               
Cow position:
               
chr16:11105319-11105694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 331
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr16:48492957-48493294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr16:49336001-49336336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
41-380
               

               
Cow position:
               
chr16:50288931-50289274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
43-370
               

               
Cow position:
               
chr16:8323210-8322869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr16:28694521-28694798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr16:56787996-56787709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr16:10032409-10032764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr16:42443935-42444281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
50-257
               

               
Cow position:
               
chr16:28692927-28692721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
53-377
               

               
Cow position:
               
chr16:14974746-14974423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 167
               

               
Conread position:
               
56-382
               

               
Cow position:
               
chr16:41530502-41530174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 127
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr16:12060205-12060521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chr16:8066089-8065772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
60-338
               

               
Cow position:
               
chr16:22860966-22860689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
60-382
               

               
Cow position:
               
chr16:8069025-8068698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
61-316
               

               
Cow position:
               
chr16:39237735-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
61-372
               

               
Cow position:
               
chr16:11957790-11957462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
62-382
               

               
Cow position:
               
chr16:9985595-9985267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
67-394
               

               
Cow position:
               
chr16:14685589-14685251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
74-373
               

               
Cow position:
               
chr16:45554245-45554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 170
               

               
Conread position:
               
76-328
               

               
Cow position:
               
chr16:54083843-54084107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr16:592007-591719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
76-370
               

               
Cow position:
               
chr16:46433514-46433211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr16:42200699-42201028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
80-417
               

               
Cow position:
               
chr16:17288754-17289108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 272
               

               
Conread position:
               
86-382
               

               
Cow position:
               
chr16:17945344-17945645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
91-370
               

               
Cow position:
               
chr16:34153750-34153457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
91-382
               

               
Cow position:
               
chr16:7549792-7550092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
95-382
               

               
Cow position:
               
chr16:47854770-47855064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
96-383
               

               
Cow position:
               
chr16:52133686-52133391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
103-399
               

               
Cow position:
               
chr16:38243826-38243521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
104-384
               

               
Cow position:
               
chr16:25380659-25380367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
109-368
               

               
Cow position:
               
chr16:29712262-29712531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
122-382
               

               
Cow position:
               
chr16:22984616-22984879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
125-358
               

               
Cow position:
               
chr16:36121122-36120882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
125-373
               

               
Cow position:
               
chr16:56565454-56565713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr16:27160989-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
138-370
               

               
Cow position:
               
chr16:23955955-23955718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
148-387
               

               
Cow position:
               
chr16:56796779-56796535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
150-367
               

               
Cow position:
               
chr16:12501271-12501050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
153-373
               

               
Cow position:
               
chr16:7619285-7619068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
158-381
               

               
Cow position:
               
chr16:30186540-30186767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
166-373
               

               
Cow position:
               
chr16:44428785-44429000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr16:8273930-8273695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
167-358
               

               
Cow position:
               
chr16:20871933-20872123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
167-372
               

               
Cow position:
               
chr16:48545727-48545937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
184-378
               

               
Cow position:
               
chr16:45299999-45299805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
184-380
               

               
Cow position:
               
chr16:7583323-7583521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
185-381
               

               
Cow position:
               
chr16:30359134-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
167, 45
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr16:33530343-33530535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
194-381
               

               
Cow position:
               
chr16:28444553-28444365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
227-382
               

               
Cow position:
               
chr16:15023661-15023505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
235-382
               

               
Cow position:
               
chr16:48448701-48448849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
118, 94
               
Show alignments to all cow chromosomes.