Cow genome map

Conread name: Pig2-106O01

Conread position: 1-287
Cow position: chr20:18185352-18185638 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 102

Conread position: 1-319
Cow position: chr20:3331521-3331181 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 229

Conread position: 1-325
Cow position: chr20:11176474-11176137 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1-333
Cow position: chr20:20353141-20352794 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 63

Conread position: 1-343
Cow position: chr20:20202989-20203346 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 228

Conread position: 1-344
Cow position: chr20:34001623-34001261 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 56

Conread position: 1-369
Cow position: chr20:9433375-9433742 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 148, 84

Conread position: 1-370
Cow position: chr20:6903102-6903470 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 50

Conread position: 1-373
Cow position: chr20:4945472-4945095 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 1-373
Cow position: chr20:9412269-9412647 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 155, 122

Conread position: 1-373
Cow position: chr20:12996236-12995847 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 1-373
Cow position: chr20:33144780-33144394 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 16, 226

Conread position: 1-382
Cow position: chr20:6054739-6054341 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 98

Conread position: 1-382
Cow position: chr20:36779957-36779560 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 227

Conread position: 1-386
Cow position: chr20:22064846-22065238 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 161

Conread position: 1-386
Cow position: chr20:33435392-33434988 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 122

Conread position: 1-387
Cow position: chr20:19236863-19237248 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 47

Conread position: 1-394
Cow position: chr20:12582174-12581774 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 2-281
Cow position: chr20:20312963-20312681 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 87

Conread position: 2-324
Cow position: chr20:15549123-15548787 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 98

Conread position: 2-332
Cow position: chr20:31740441-31740102 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 53

Conread position: 2-349
Cow position: chr20:9588388-9588746 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 110

Conread position: 2-372
Cow position: chr20:8429519-8429898 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 103, 226

Conread position: 2-373
Cow position: chr20:17251485-17251876 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 3-154
Cow position: chr20:31147871-31148017 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 3-255
Cow position: chr20:9988368-9988620 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 156, 25

Conread position: 3-328
Cow position: chr20:7806787-7806456 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 231

Conread position: 3-328
Cow position: chr20:41028266-41028602 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 35

Conread position: 3-345
Cow position: chr20:39743089-39743440 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 220
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 199

Conread position: 3-358
Cow position: chr20:17845735-17846102 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 249

Conread position: 3-370
Cow position: chr20:5950857-5950487 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 28, 139

Conread position: 3-371
Cow position: chr20:19459869-19459508 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 79

Conread position: 3-372
Cow position: chr20:6240754-6240363 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 23, 231

Conread position: 3-382
Cow position: chr20:7426414-7426029 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 231

Conread position: 3-382
Cow position: chr20:8556495-8556101 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 347

Conread position: 3-399
Cow position: chr20:10200116-10200531 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 194

Conread position: 4-368
Cow position: chr20:4621563-4621200 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 108

Conread position: 4-378
Cow position: chr20:13829043-13829423 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 223

Conread position: 5-358
Cow position: chr20:26996311-26996672 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 101, 200

Conread position: 5-371
Cow position: chr20:40177029-40177402 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 237
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 119

Conread position: 5-380
Cow position: chr20:39517790-39518172 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 254
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 71

Conread position: 6-278
Cow position: chr20:15761170-15760886 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 157

Conread position: 6-324
Cow position: chr20:35009962-35009628 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 118

Conread position: 6-372
Cow position: chr20:581144-580762 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 219

Conread position: 8-404
Cow position: chr20:39415526-39415942 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 51

Conread position: 10-382
Cow position: chr20:19751091-19751475 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 140

Conread position: 11-380
Cow position: chr20:398511-398141 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 78

Conread position: 12-324
Cow position: chr20:22313368-22313051 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 144, 19

Conread position: 20-382
Cow position: chr20:20967134-20967489 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 65

Conread position: 21-361
Cow position: chr20:38768657-38768317 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 93

Conread position: 26-358
Cow position: chr20:23792406-23792747 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 11

Conread position: 26-394
Cow position: chr20:34098156-34097772 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 197

Conread position: 27-373
Cow position: chr20:15566028-15565670 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 81, 196

Conread position: 28-358
Cow position: chr20:14806690-14807030 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 80

Conread position: 28-370
Cow position: chr20:10818420-10818084 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 13

Conread position: 28-370
Cow position: chr20:34776990-34777336 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 85

Conread position: 28-372
Cow position: chr20:38873208-38872844 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 231
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 216

Conread position: 28-382
Cow position: chr20:13023674-13023333 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 337, 136

Conread position: 28-382
Cow position: chr20:20739485-20739119 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 94

Conread position: 28-382
Cow position: chr20:29844859-29845218 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 189

Conread position: 29-460
Cow position: chr20:21928710-21929147 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 286
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 31

Conread position: 31-375
Cow position: chr20:34107923-34108266 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 38

Conread position: 31-381
Cow position: chr20:21372123-21372475 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 146

Conread position: 32-333
Cow position: chr20:39325193-39325509 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 196

Conread position: 32-371
Cow position: chr20:11482331-11481978 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 195

Conread position: 32-373
Cow position: chr20:20983815-20984151 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 132, 53

Conread position: 33-362
Cow position: chr20:8578053-8578397 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 171

Conread position: 33-382
Cow position: chr20:9923406-9923735 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 57

Conread position: 47-394
Cow position: chr20:14980692-14980325 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 181

Conread position: 59-373
Cow position: chr20:14100603-14100276 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 28

Conread position: 60-373
Cow position: chr20:3254884-3255196 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 102

Conread position: 60-382
Cow position: chr20:3141419-3141741 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 60-382
Cow position: chr20:3321302-3320976 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 61

Conread position: 61-388
Cow position: chr20:15569114-15568775 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 163

Conread position: 62-326
Cow position: chr20:3740162-3739893 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 109

Conread position: 68-369
Cow position: chr20:2169864-2169568 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 94

Conread position: 77-373
Cow position: chr20:4334667-4334370 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 31

Conread position: 82-392
Cow position: chr20:14433570-14433246 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 142

Conread position: 89-369
Cow position: chr20:9267236-9266952 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 70

Conread position: 90-400
Cow position: chr20:4332004-4332317 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 87, 79

Conread position: 91-341
Cow position: chr20:8098148-8098412 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 129-387
Cow position: chr20:24711740-24712014 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 132-382
Cow position: chr20:16941369-16941120 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 11

Conread position: 134-372
Cow position: chr20:23506550-23506315 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 48

Conread position: 151-383
Cow position: chr20:11008103-11008339 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 61

Conread position: 167-371
Cow position: chr20:23541208-23541003 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 45

Conread position: 167-372
Cow position: chr20:11548772-11548566 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 46

Conread position: 168-384
Cow position: chr20:354946-354731 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 122

Conread position: 185-379
Cow position: chr20:11359660-11359467 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 29

Show alignments to all cow chromosomes.