Cow genome map
| Conread name: | Pig2-106O01 |
| Conread position: | 1-257 |
| Cow position: | chr21:21480385-21480121 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 103, 213 |
| Conread position: | 1-324 |
| Cow position: | chr21:5595455-5595776 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 1-327 |
| Cow position: | chr21:25127402-25127737 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 1-333 |
| Cow position: | chr21:12366181-12366510 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 220 |
| Conread position: | 1-342 |
| Cow position: | chr21:47760571-47760916 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 1-345 |
| Cow position: | chr21:42540426-42540071 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 1-351 |
| Cow position: | chr21:4998691-4998338 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 224 |
| Conread position: | 1-356 |
| Cow position: | chr21:28477419-28477792 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 204 |
| Conread position: | 1-359 |
| Cow position: | chr21:39403744-39403360 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-370 |
| Cow position: | chr21:3585562-3585191 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 1-370 |
| Cow position: | chr21:17511570-17511954 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 1-370 |
| Cow position: | chr21:23535507-23535886 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 1-370 |
| Cow position: | chr21:38918009-38918375 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 24, 179 |
| Conread position: | 1-371 |
| Cow position: | chr21:16696164-16696550 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 1-372 |
| Cow position: | chr21:19196374-19195985 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 247 |
| Conread position: | 1-372 |
| Cow position: | chr21:19766648-19767033 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 1-373 |
| Cow position: | chr21:395672-396047 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 1-373 |
| Cow position: | chr21:643131-643504 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 124 |
| Conread position: | 1-373 |
| Cow position: | chr21:9416036-9416429 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 217 |
| Conread position: | 1-373 |
| Cow position: | chr21:11740338-11739940 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 1-373 |
| Cow position: | chr21:13035255-13034858 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-373 |
| Cow position: | chr21:26648210-26647836 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 1-373 |
| Cow position: | chr21:27863725-27863334 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 214 |
| Conread position: | 1-375 |
| Cow position: | chr21:32297708-32297337 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 1-380 |
| Cow position: | chr21:24858105-24858502 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 228 |
| Conread position: | 1-381 |
| Cow position: | chr21:28626035-28626425 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 1-381 |
| Cow position: | chr21:38900567-38900960 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 1-382 |
| Cow position: | chr21:937843-938208 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 166, 46 |
| Conread position: | 1-382 |
| Cow position: | chr21:27341803-27341406 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 1-382 |
| Cow position: | chr21:37299259-37299651 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 186 |
| Conread position: | 1-398 |
| Cow position: | chr21:42384299-42384713 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 230 |
| Conread position: | 2-372 |
| Cow position: | chr21:6833847-6834226 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 2-380 |
| Cow position: | chr21:45971363-45970987 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 2-382 |
| Cow position: | chr21:4399594-4399992 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 2-388 |
| Cow position: | chr21:19258621-19259015 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 222 |
| Conread position: | 3-314 |
| Cow position: | chr21:13489439-13489766 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 3-326 |
| Cow position: | chr21:8618070-8618396 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 3-360 |
| Cow position: | chr21:31662256-31662632 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 215 |
| Conread position: | 3-368 |
| Cow position: | chr21:42414306-42413922 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 3-369 |
| Cow position: | chr21:30849143-30848765 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 3-372 |
| Cow position: | chr21:15584607-15584240 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 3-372 |
| Cow position: | chr21:41620915-41621304 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 3-373 |
| Cow position: | chr21:27569362-27568993 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 3-382 |
| Cow position: | chr21:33517-33908 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 127 |
| Conread position: | 3-382 |
| Cow position: | chr21:6051302-6051692 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 3-382 |
| Cow position: | chr21:15976440-15976821 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 3-395 |
| Cow position: | chr21:20160480-20160878 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 3-399 |
| Cow position: | chr21:38120903-38121307 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 4-334 |
| Cow position: | chr21:34391171-34390835 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 4-358 |
| Cow position: | chr21:12801947-12801583 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 194 |
| Conread position: | 4-369 |
| Cow position: | chr21:37706606-37706239 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 4-370 |
| Cow position: | chr21:45355633-45356010 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 216 |
| Conread position: | 4-373 |
| Cow position: | chr21:24598456-24598837 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 4-380 |
| Cow position: | chr21:41579548-41579943 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 4-386 |
| Cow position: | chr21:30607288-30606905 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 5-373 |
| Cow position: | chr21:36297277-36297674 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 5-387 |
| Cow position: | chr21:41597613-41598005 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 227 |
| Conread position: | 6-321 |
| Cow position: | chr21:44515073-44515391 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 6-372 |
| Cow position: | chr21:9310842-9311231 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 6-382 |
| Cow position: | chr21:27521526-27521151 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 7-367 |
| Cow position: | chr21:23672544-23672919 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 7-373 |
| Cow position: | chr21:44252026-44251663 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 7-375 |
| Cow position: | chr21:31691277-31691664 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 227 |
| Conread position: | 9-373 |
| Cow position: | chr21:7582103-7581725 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 13-365 |
| Cow position: | chr21:42841785-42841425 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 15-375 |
| Cow position: | chr21:5426754-5427120 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 16-382 |
| Cow position: | chr21:10263852-10264221 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 20-326 |
| Cow position: | chr21:39664573-39664266 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 10, 158 |
| Conread position: | 21-358 |
| Cow position: | chr21:18850402-18850059 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 21-372 |
| Cow position: | chr21:14452047-14452413 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 21-373 |
| Cow position: | chr21:42135807-42135436 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-387 |
| Cow position: | chr21:45473941-45473563 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 206 |
| Conread position: | 21-388 |
| Cow position: | chr21:4282051-4281684 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 21-395 |
| Cow position: | chr21:17643153-17642785 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 26-289 |
| Cow position: | chr21:6102446-6102166 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 26-382 |
| Cow position: | chr21:17193937-17193562 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 123, 199 |
| Conread position: | 27-333 |
| Cow position: | chr21:41198587-41198260 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 27-382 |
| Cow position: | chr21:9990338-9990699 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 27-385 |
| Cow position: | chr21:44565878-44565530 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 28-257 |
| Cow position: | chr21:48176651-48176887 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 28-322 |
| Cow position: | chr21:18845190-18844884 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 28-326 |
| Cow position: | chr21:13488344-13488659 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 28-367 |
| Cow position: | chr21:37345277-37344927 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 89, 199 |
| Conread position: | 28-370 |
| Cow position: | chr21:32559529-32559188 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 111, 68 |
| Conread position: | 28-373 |
| Cow position: | chr21:802469-802137 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 68 |
| Conread position: | 28-373 |
| Cow position: | chr21:18951182-18951537 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 122, 80 |
| Conread position: | 28-379 |
| Cow position: | chr21:25382834-25383212 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 28-380 |
| Cow position: | chr21:23568033-23568415 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 199 |
| Conread position: | 28-382 |
| Cow position: | chr21:32339912-32339551 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 68 |
| Conread position: | 30-394 |
| Cow position: | chr21:11645142-11644763 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 94, 78 |
| Conread position: | 30-398 |
| Cow position: | chr21:36795430-36795807 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 126, 78 |
| Conread position: | 31-379 |
| Cow position: | chr21:27146164-27145805 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 194 |
| Conread position: | 31-381 |
| Cow position: | chr21:17183750-17184105 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 31-384 |
| Cow position: | chr21:21169667-21169305 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 32-358 |
| Cow position: | chr21:29214320-29213996 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 124, 76 |
| Conread position: | 32-370 |
| Cow position: | chr21:45330112-45329773 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 33-326 |
| Cow position: | chr21:10007812-10007507 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 59 |
| Conread position: | 33-373 |
| Cow position: | chr21:712764-713123 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 34-321 |
| Cow position: | chr21:24887839-24888126 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 126 |
| Conread position: | 34-373 |
| Cow position: | chr21:34653913-34654253 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 35-373 |
| Cow position: | chr21:10000912-10001255 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 43 |
| Conread position: | 37-370 |
| Cow position: | chr21:9028454-9028792 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 136 |
| Conread position: | 38-369 |
| Cow position: | chr21:27624547-27624874 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 43-326 |
| Cow position: | chr21:32454741-32455036 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 47-326 |
| Cow position: | chr21:13840166-13840458 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 47-373 |
| Cow position: | chr21:28244319-28244650 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 112, 60 |
| Conread position: | 47-380 |
| Cow position: | chr21:18800685-18800347 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 110 |
| Conread position: | 49-381 |
| Cow position: | chr21:24642364-24642700 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 49-382 |
| Cow position: | chr21:26244777-26245103 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 60-375 |
| Cow position: | chr21:42007603-42007280 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 62-372 |
| Cow position: | chr21:11027499-11027181 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 63-373 |
| Cow position: | chr21:48234299-48233985 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 134 |
| Conread position: | 64-373 |
| Cow position: | chr21:6713662-6713343 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 65-370 |
| Cow position: | chr21:12462109-12461789 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 158 |
| Conread position: | 65-373 |
| Cow position: | chr21:28923978-28924290 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 65-382 |
| Cow position: | chr21:11359899-11360215 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 67-382 |
| Cow position: | chr21:30222206-30222534 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 68-345 |
| Cow position: | chr21:17856408-17856693 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 68-372 |
| Cow position: | chr21:17875331-17875014 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 159 |
| Conread position: | 72-370 |
| Cow position: | chr21:12301635-12301334 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 73-380 |
| Cow position: | chr21:46908-47227 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 74-382 |
| Cow position: | chr21:2810273-2809976 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 22 |
| Conread position: | 74-387 |
| Cow position: | chr21:34151451-34151778 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 80, 152 |
| Conread position: | 81-337 |
| Cow position: | chr21:36789671-36789938 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 89-370 |
| Cow position: | chr21:25629026-25628735 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 89-398 |
| Cow position: | chr21:2657705-2658013 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 94-257 |
| Cow position: | chr21:9980073-9979907 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 95-370 |
| Cow position: | chr21:10673023-10673298 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 116 |
| Conread position: | 99-357 |
| Cow position: | chr21:42022186-42022438 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 237, 65 |
| Conread position: | 111-389 |
| Cow position: | chr21:6997846-6998144 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 113 |
| Conread position: | 114-370 |
| Cow position: | chr21:22210333-22210070 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 126-375 |
| Cow position: | chr21:45262889-45262628 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 73 |
| Conread position: | 129-373 |
| Cow position: | chr21:36909860-36910111 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 167-391 |
| Cow position: | chr21:868955-868725 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 167-469 |
| Cow position: | chr21:7394352-7394651 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 126 |
| Conread position: | 171-369 |
| Cow position: | chr21:7377950-7377750 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 173-382 |
| Cow position: | chr21:10538274-10538066 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 183-370 |
| Cow position: | chr21:6387988-6388176 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 184-369 |
| Cow position: | chr21:17890292-17890478 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 184-384 |
| Cow position: | chr21:33580410-33580610 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 186-382 |
| Cow position: | chr21:44724374-44724184 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 171, 28 |
| Conread position: | 196-370 |
| Cow position: | chr21:31159404-31159574 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 219-398 |
| Cow position: | chr21:36682350-36682529 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 165 |
| Conread position: | 230-371 |
| Cow position: | chr21:17265965-17265822 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.