Cow genome map

Conread name: Pig2-106O01

Conread position: 1-154
Cow position: chr24:21264800-21264648 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 1-324
Cow position: chr24:17407099-17407431 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-326
Cow position: chr24:2391897-2392230 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 215
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 162

Conread position: 1-327
Cow position: chr24:6149736-6150068 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 63

Conread position: 1-327
Cow position: chr24:32054377-32054706 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 126

Conread position: 1-333
Cow position: chr24:38814677-38815018 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 113

Conread position: 1-334
Cow position: chr24:29596105-29595757 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 91, 44

Conread position: 1-338
Cow position: chr24:42345302-42344942 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 358

Conread position: 1-341
Cow position: chr24:6071301-6071646 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 192

Conread position: 1-342
Cow position: chr24:5435338-5435007 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 148

Conread position: 1-345
Cow position: chr24:20024313-20024674 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 239

Conread position: 1-357
Cow position: chr24:20741028-20741398 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 236
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 111

Conread position: 1-359
Cow position: chr24:201927-201560 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 53

Conread position: 1-370
Cow position: chr24:9222670-9222295 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 177

Conread position: 1-371
Cow position: chr24:9070729-9070361 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 180

Conread position: 1-373
Cow position: chr24:5754547-5754927 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 25, 88

Conread position: 1-373
Cow position: chr24:11886868-11887249 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 25

Conread position: 1-373
Cow position: chr24:15246930-15246551 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 162

Conread position: 1-373
Cow position: chr24:44987668-44987283 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 25, 90

Conread position: 1-378
Cow position: chr24:19658253-19658633 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 235

Conread position: 1-380
Cow position: chr24:30235584-30235968 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 44

Conread position: 1-382
Cow position: chr24:11839884-11840286 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 239

Conread position: 1-382
Cow position: chr24:18485294-18484895 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 1-382
Cow position: chr24:18741865-18741471 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 226

Conread position: 1-382
Cow position: chr24:19466227-19465817 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 25, 63

Conread position: 1-382
Cow position: chr24:20874382-20874782 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 209

Conread position: 1-382
Cow position: chr24:27844814-27844427 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 142

Conread position: 1-384
Cow position: chr24:19535538-19535153 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 53

Conread position: 2-158
Cow position: chr24:38479257-38479104 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 91

Conread position: 2-370
Cow position: chr24:3493600-3493973 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 2-370
Cow position: chr24:28319495-28319120 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 186

Conread position: 2-378
Cow position: chr24:20225444-20225833 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 64

Conread position: 3-250
Cow position: chr24:40056010-40055762 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 96, 125

Conread position: 3-333
Cow position: chr24:25320697-25321036 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 160

Conread position: 3-358
Cow position: chr24:39483184-39483552 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 299

Conread position: 3-367
Cow position: chr24:29679604-29679227 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 226

Conread position: 3-394
Cow position: chr24:31323996-31324402 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 32

Conread position: 4-150
Cow position: chr24:28143972-28143828 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 38

Conread position: 4-271
Cow position: chr24:24137142-24136872 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 74

Conread position: 4-358
Cow position: chr24:8886625-8886986 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 97

Conread position: 4-372
Cow position: chr24:39159835-39159459 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 66

Conread position: 4-373
Cow position: chr24:31816294-31816670 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 140

Conread position: 5-371
Cow position: chr24:26929239-26928854 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 206

Conread position: 5-382
Cow position: chr24:28496878-28496482 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 387

Conread position: 5-395
Cow position: chr24:13625999-13626397 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 268
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 60

Conread position: 5-395
Cow position: chr24:31811895-31812301 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 261
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 201

Conread position: 6-370
Cow position: chr24:15057114-15057484 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 110

Conread position: 6-476
Cow position: chr24:5141652-5142140 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 323
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 39

Conread position: 7-374
Cow position: chr24:18970780-18970415 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 82

Conread position: 9-382
Cow position: chr24:11118994-11119378 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 95

Conread position: 14-358
Cow position: chr24:27748373-27748716 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 31

Conread position: 15-257
Cow position: chr24:40849884-40850137 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 134, 36

Conread position: 21-370
Cow position: chr24:24250461-24250811 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 42

Conread position: 21-382
Cow position: chr24:35675272-35675635 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 198

Conread position: 28-341
Cow position: chr24:7913735-7914065 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 79, 200

Conread position: 28-345
Cow position: chr24:32823045-32822708 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 32

Conread position: 28-361
Cow position: chr24:36404410-36404064 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 19

Conread position: 28-369
Cow position: chr24:29673256-29673609 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 164

Conread position: 28-377
Cow position: chr24:43364100-43364454 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 139, 67

Conread position: 28-382
Cow position: chr24:14648598-14648258 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 76

Conread position: 28-382
Cow position: chr24:15861864-15861493 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 195

Conread position: 28-382
Cow position: chr24:19769235-19769596 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 130, 57

Conread position: 28-382
Cow position: chr24:37650407-37650768 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 150, 131

Conread position: 31-304
Cow position: chr24:27874344-27874617 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 123, 77

Conread position: 31-372
Cow position: chr24:16994635-16994972 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 15

Conread position: 31-399
Cow position: chr24:27906174-27906556 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 195

Conread position: 32-358
Cow position: chr24:32370169-32369839 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 68

Conread position: 32-380
Cow position: chr24:27039779-27040146 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 199

Conread position: 32-382
Cow position: chr24:30229209-30229578 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 89, 193

Conread position: 33-324
Cow position: chr24:3430477-3430775 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 29

Conread position: 42-357
Cow position: chr24:24755200-24755522 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 85

Conread position: 42-382
Cow position: chr24:31359074-31359422 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 7

Conread position: 48-257
Cow position: chr24:27207438-27207220 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 154

Conread position: 48-388
Cow position: chr24:24457491-24457144 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 53-327
Cow position: chr24:33222178-33221895 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 55

Conread position: 60-356
Cow position: chr24:20250135-20249822 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 198

Conread position: 62-370
Cow position: chr24:34396402-34396090 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 10

Conread position: 65-316
Cow position: chr24:10012546-10012786 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 57

Conread position: 70-373
Cow position: chr24:16509751-16510069 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 31

Conread position: 74-382
Cow position: chr24:33465818-33465521 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 30

Conread position: 79-371
Cow position: chr24:20801556-20801256 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 44

Conread position: 79-382
Cow position: chr24:34008793-34008472 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 89-373
Cow position: chr24:352807-352515 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 68

Conread position: 100-382
Cow position: chr24:17833004-17832720 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 5

Conread position: 104-373
Cow position: chr24:41423422-41423695 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 118

Conread position: 109-371
Cow position: chr24:16895618-16895348 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 105

Conread position: 109-372
Cow position: chr24:18017047-18017318 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 13

Conread position: 110-337
Cow position: chr24:18999866-19000102 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 100

Conread position: 111-373
Cow position: chr24:10299903-10300168 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 109

Conread position: 153-379
Cow position: chr24:38478516-38478295 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 18

Conread position: 167-380
Cow position: chr24:16645441-16645220 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 49

Conread position: 186-383
Cow position: chr24:28289346-28289152 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 230-370
Cow position: chr24:17375586-17375727 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Show alignments to all cow chromosomes.