Cow genome map

Conread name: Pig2-106O01

Conread position: 1-154
Cow position: chr25:30035280-30035433 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-321
Cow position: chr25:6803292-6803607 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 70

Conread position: 1-328
Cow position: chr25:3145574-3145912 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 60

Conread position: 1-351
Cow position: chr25:6226769-6227126 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 177

Conread position: 1-358
Cow position: chr25:8120505-8120878 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 326

Conread position: 1-358
Cow position: chr25:11437074-11436710 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 128

Conread position: 1-358
Cow position: chr25:17975639-17975281 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 161

Conread position: 1-362
Cow position: chr25:16064625-16064995 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 110

Conread position: 1-362
Cow position: chr25:21245878-21245502 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 228

Conread position: 1-368
Cow position: chr25:21191215-21191598 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 71

Conread position: 1-371
Cow position: chr25:15714609-15714985 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 164

Conread position: 1-373
Cow position: chr25:27531540-27531157 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 249
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 124

Conread position: 1-374
Cow position: chr25:25051656-25051262 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 133

Conread position: 1-375
Cow position: chr25:14512844-14513231 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 109

Conread position: 1-378
Cow position: chr25:21024488-21024086 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 87

Conread position: 1-378
Cow position: chr25:41107486-41107872 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 251
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 87

Conread position: 1-379
Cow position: chr25:1837968-1838361 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 1-380
Cow position: chr25:16922064-16921675 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 184

Conread position: 1-381
Cow position: chr25:36761834-36762227 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 1-382
Cow position: chr25:26225311-26224906 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 100

Conread position: 1-384
Cow position: chr25:23053284-23053681 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 256
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 140

Conread position: 2-375
Cow position: chr25:18564224-18564602 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 110

Conread position: 3-326
Cow position: chr25:12261164-12260823 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 58

Conread position: 3-370
Cow position: chr25:9990361-9990000 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 110

Conread position: 3-382
Cow position: chr25:22531017-22531404 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 94

Conread position: 6-357
Cow position: chr25:9349524-9349187 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 82

Conread position: 6-373
Cow position: chr25:9055934-9056292 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 32

Conread position: 6-382
Cow position: chr25:7216561-7216947 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 222

Conread position: 7-370
Cow position: chr25:11956561-11956915 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 168

Conread position: 7-382
Cow position: chr25:28188216-28187822 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 223

Conread position: 8-382
Cow position: chr25:15273425-15273796 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 43

Conread position: 10-373
Cow position: chr25:17566324-17566703 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 105

Conread position: 21-346
Cow position: chr25:18988128-18988476 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 87, 0

Conread position: 21-380
Cow position: chr25:22314952-22315326 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 104

Conread position: 21-382
Cow position: chr25:24669679-24669326 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 104

Conread position: 23-373
Cow position: chr25:22369147-22369499 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 247

Conread position: 26-371
Cow position: chr25:15254574-15254236 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 166, 131

Conread position: 28-333
Cow position: chr25:35612542-35612240 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 72

Conread position: 28-355
Cow position: chr25:15377092-15377421 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 70

Conread position: 28-357
Cow position: chr25:16319373-16319043 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 131

Conread position: 28-358
Cow position: chr25:4547961-4547620 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 178

Conread position: 28-373
Cow position: chr25:7306057-7306405 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 185

Conread position: 28-380
Cow position: chr25:11585277-11585639 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 193

Conread position: 28-382
Cow position: chr25:5847047-5846685 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 30-340
Cow position: chr25:37594175-37594486 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 123, 87

Conread position: 30-369
Cow position: chr25:8576454-8576804 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 218
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 31-278
Cow position: chr25:16001758-16001507 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 118, 82

Conread position: 31-328
Cow position: chr25:38425127-38425429 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 213

Conread position: 31-369
Cow position: chr25:38135510-38135855 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 78

Conread position: 32-326
Cow position: chr25:12293988-12293681 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 32-368
Cow position: chr25:18721342-18721011 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 48

Conread position: 32-373
Cow position: chr25:10504572-10504227 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 135, 76

Conread position: 32-375
Cow position: chr25:30279444-30279090 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 111

Conread position: 32-382
Cow position: chr25:7581665-7581303 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 194

Conread position: 33-320
Cow position: chr25:2194709-2194991 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 187

Conread position: 33-358
Cow position: chr25:36746682-36746352 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 129

Conread position: 33-373
Cow position: chr25:12840954-12840604 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 117

Conread position: 33-382
Cow position: chr25:9269135-9269466 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 198, 74

Conread position: 34-384
Cow position: chr25:20007912-20008258 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 115, 51

Conread position: 35-382
Cow position: chr25:6683295-6682938 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 101

Conread position: 38-384
Cow position: chr25:20785815-20785464 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 105

Conread position: 41-388
Cow position: chr25:34169726-34170076 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 116

Conread position: 43-376
Cow position: chr25:25861586-25861234 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 68, 182

Conread position: 56-382
Cow position: chr25:40905043-40904707 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 113

Conread position: 59-358
Cow position: chr25:26090025-26089715 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 209

Conread position: 63-349
Cow position: chr25:16714480-16714180 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 59

Conread position: 63-374
Cow position: chr25:13272363-13272684 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 98

Conread position: 65-380
Cow position: chr25:17704545-17704865 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 108

Conread position: 65-380
Cow position: chr25:18905677-18906006 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 162

Conread position: 66-377
Cow position: chr25:20133518-20133197 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 159

Conread position: 68-382
Cow position: chr25:7750249-7750575 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 76-358
Cow position: chr25:14720559-14720842 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 109

Conread position: 80-382
Cow position: chr25:11315722-11316024 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 16

Conread position: 91-370
Cow position: chr25:22751190-22750896 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 135

Conread position: 96-382
Cow position: chr25:21893163-21893462 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 126

Conread position: 103-372
Cow position: chr25:26679062-26679339 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 50, 99

Conread position: 112-382
Cow position: chr25:5474383-5474107 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 114

Conread position: 119-380
Cow position: chr25:30618916-30619184 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 104

Conread position: 129-372
Cow position: chr25:17119609-17119855 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 5

Conread position: 132-382
Cow position: chr25:433175-432925 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 24

Conread position: 165-382
Cow position: chr25:35052715-35052499 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 6

Conread position: 167-386
Cow position: chr25:1824191-1823972 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 25

Conread position: 185-372
Cow position: chr25:30816810-30817002 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 214-387
Cow position: chr25:35109313-35109141 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 12

Conread position: 220-373
Cow position: chr25:33457693-33457846 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 10

Conread position: 233-379
Cow position: chr25:13503406-13503554 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 0

Show alignments to all cow chromosomes.