Cow genome map

Conread name: Pig2-106O01

Conread position: 1-289
Cow position: chr29:12005035-12004733 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 31, 115

Conread position: 1-321
Cow position: chr29:15940909-15940569 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1-325
Cow position: chr29:20674079-20673745 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 164

Conread position: 1-326
Cow position: chr29:29589188-29588860 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 165

Conread position: 1-333
Cow position: chr29:4625264-4624926 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 88

Conread position: 1-341
Cow position: chr29:35484973-35485327 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 229

Conread position: 1-351
Cow position: chr29:26263584-26263927 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 179, 75

Conread position: 1-367
Cow position: chr29:7965982-7966354 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 116, 30

Conread position: 1-370
Cow position: chr29:17607145-17607527 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 164

Conread position: 1-370
Cow position: chr29:28195790-28195410 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 131

Conread position: 1-370
Cow position: chr29:29056912-29057286 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 72

Conread position: 1-370
Cow position: chr29:36530592-36530978 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 205

Conread position: 1-370
Cow position: chr29:39567415-39567792 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 130

Conread position: 1-371
Cow position: chr29:35501919-35501543 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 110

Conread position: 1-372
Cow position: chr29:5892576-5892958 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 141

Conread position: 1-372
Cow position: chr29:21196921-21196536 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 223

Conread position: 1-374
Cow position: chr29:9709428-9709810 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 87

Conread position: 1-374
Cow position: chr29:35291828-35292208 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 88

Conread position: 1-381
Cow position: chr29:87288-86890 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 59

Conread position: 1-382
Cow position: chr29:16609467-16609871 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 72

Conread position: 1-382
Cow position: chr29:28775725-28775340 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 121

Conread position: 1-382
Cow position: chr29:34745925-34745536 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 87

Conread position: 1-382
Cow position: chr29:40096694-40097085 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 107, 30

Conread position: 1-382
Cow position: chr29:40583526-40583908 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 110

Conread position: 1-387
Cow position: chr29:31786407-31786803 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 254
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 97

Conread position: 1-388
Cow position: chr29:6293738-6293352 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 86

Conread position: 1-395
Cow position: chr29:16657420-16657830 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 41, 50

Conread position: 1-401
Cow position: chr29:26017782-26017360 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 60

Conread position: 2-373
Cow position: chr29:19428398-19428774 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 147, 36

Conread position: 3-333
Cow position: chr29:14501325-14501666 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 3-339
Cow position: chr29:40165973-40166323 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 91

Conread position: 3-356
Cow position: chr29:20626308-20626663 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 98

Conread position: 3-372
Cow position: chr29:38581700-38582081 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 23, 60

Conread position: 3-373
Cow position: chr29:21443613-21443224 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 3-373
Cow position: chr29:25333722-25333347 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 109

Conread position: 3-382
Cow position: chr29:41530581-41530972 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 5-373
Cow position: chr29:17463046-17462668 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 45

Conread position: 5-382
Cow position: chr29:22069014-22068620 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 89

Conread position: 6-320
Cow position: chr29:17131873-17131559 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 122

Conread position: 6-370
Cow position: chr29:4367455-4367837 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 221

Conread position: 6-370
Cow position: chr29:37961240-37960865 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 11, 27

Conread position: 6-372
Cow position: chr29:17409067-17409448 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 65

Conread position: 6-373
Cow position: chr29:13615909-13615541 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 58

Conread position: 7-358
Cow position: chr29:28868366-28868741 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 19, 159

Conread position: 8-382
Cow position: chr29:32799967-32799590 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 92

Conread position: 20-257
Cow position: chr29:37292528-37292776 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 105

Conread position: 25-403
Cow position: chr29:23874216-23874603 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 368

Conread position: 27-327
Cow position: chr29:26615966-26615653 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 28-272
Cow position: chr29:35738510-35738260 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 163

Conread position: 28-325
Cow position: chr29:27009178-27009481 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 131

Conread position: 28-345
Cow position: chr29:11562374-11562698 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 147

Conread position: 28-369
Cow position: chr29:17222168-17222524 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 81, 196

Conread position: 28-370
Cow position: chr29:16195612-16195951 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 149, 80

Conread position: 28-372
Cow position: chr29:7956224-7955877 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 121, 173

Conread position: 28-372
Cow position: chr29:29769586-29769238 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 126, 57

Conread position: 28-373
Cow position: chr29:1556692-1557045 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 128, 174

Conread position: 28-380
Cow position: chr29:31928739-31929108 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 62, 32

Conread position: 28-382
Cow position: chr29:8926699-8926338 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 124

Conread position: 28-382
Cow position: chr29:25737657-25737292 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 81

Conread position: 28-395
Cow position: chr29:40891942-40891570 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 224

Conread position: 30-370
Cow position: chr29:26778646-26778993 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 138

Conread position: 30-388
Cow position: chr29:707183-706828 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 118, 33

Conread position: 32-317
Cow position: chr29:18735879-18735582 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 173

Conread position: 32-320
Cow position: chr29:36183039-36183341 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 48

Conread position: 32-370
Cow position: chr29:109473-109794 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 94

Conread position: 32-373
Cow position: chr29:13639603-13639252 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 64

Conread position: 32-382
Cow position: chr29:11704886-11705236 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 167

Conread position: 32-382
Cow position: chr29:19949073-19949430 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 128

Conread position: 33-382
Cow position: chr29:23697743-23698099 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 115

Conread position: 33-399
Cow position: chr29:6286393-6286021 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 130, 86

Conread position: 34-334
Cow position: chr29:14615492-14615189 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 12

Conread position: 34-381
Cow position: chr29:22613198-22613549 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 7

Conread position: 38-349
Cow position: chr29:868542-868864 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 85, 199

Conread position: 41-367
Cow position: chr29:1229381-1229715 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 21

Conread position: 46-373
Cow position: chr29:40299235-40298906 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 175

Conread position: 48-326
Cow position: chr29:39280011-39280287 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 45

Conread position: 48-379
Cow position: chr29:463874-463532 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 138

Conread position: 59-382
Cow position: chr29:35677754-35677420 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 68

Conread position: 60-380
Cow position: chr29:30440717-30441058 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 70

Conread position: 61-350
Cow position: chr29:41364902-41365199 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 164

Conread position: 61-368
Cow position: chr29:38580768-38581088 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 249

Conread position: 63-372
Cow position: chr29:22690014-22690338 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 169

Conread position: 65-370
Cow position: chr29:1022086-1022406 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 163

Conread position: 69-341
Cow position: chr29:3100461-3100186 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 129

Conread position: 77-382
Cow position: chr29:32211251-32210948 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 84

Conread position: 78-330
Cow position: chr29:44988972-44988720 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 125

Conread position: 78-375
Cow position: chr29:5186689-5186377 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 89-373
Cow position: chr29:41113040-41112767 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 71

Conread position: 89-382
Cow position: chr29:37618126-37618429 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 70

Conread position: 90-373
Cow position: chr29:28166391-28166108 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 67

Conread position: 91-373
Cow position: chr29:27588743-27589037 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 112

Conread position: 98-371
Cow position: chr29:31891693-31891420 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 38

Conread position: 99-382
Cow position: chr29:17296963-17297259 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 5

Conread position: 156-372
Cow position: chr29:18404220-18404004 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 15

Conread position: 184-373
Cow position: chr29:13867288-13867096 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 30

Conread position: 218-394
Cow position: chr29:23825252-23825074 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 227-382
Cow position: chr29:5520518-5520362 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 134, 0

Show alignments to all cow chromosomes.