Cow genome map

Conread name: Pig2-106O01

Conread position: 1-324
Cow position: chr3:79902210-79902538 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 158

Conread position: 1-326
Cow position: chr3:53573043-53572708 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 30, 115

Conread position: 1-327
Cow position: chr3:31047235-31046907 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 16

Conread position: 1-333
Cow position: chr3:15954370-15954034 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 125

Conread position: 1-333
Cow position: chr3:16547383-16547717 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 164

Conread position: 1-333
Cow position: chr3:25690495-25690844 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 1-333
Cow position: chr3:31206579-31206927 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1-333
Cow position: chr3:57754773-57754425 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 245

Conread position: 1-333
Cow position: chr3:67929559-67929209 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 65

Conread position: 1-333
Cow position: chr3:79592182-79591840 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 235

Conread position: 1-342
Cow position: chr3:56582550-56582908 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 222

Conread position: 1-357
Cow position: chr3:72473614-72473990 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-358
Cow position: chr3:51012826-51012478 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 167

Conread position: 1-362
Cow position: chr3:59798961-59799329 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 98

Conread position: 1-362
Cow position: chr3:74600824-74601195 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 99

Conread position: 1-367
Cow position: chr3:59101542-59101913 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 97

Conread position: 1-368
Cow position: chr3:59473823-59474209 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 228

Conread position: 1-368
Cow position: chr3:71231113-71231482 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 107

Conread position: 1-368
Cow position: chr3:79884779-79884399 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 229

Conread position: 1-369
Cow position: chr3:6689698-6690088 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 247

Conread position: 1-369
Cow position: chr3:55190043-55189666 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 104

Conread position: 1-370
Cow position: chr3:18459813-18459439 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 129

Conread position: 1-370
Cow position: chr3:50768386-50768768 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 231

Conread position: 1-370
Cow position: chr3:59588226-59588599 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 225

Conread position: 1-370
Cow position: chr3:59611009-59610629 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 44

Conread position: 1-370
Cow position: chr3:70566031-70565649 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 201

Conread position: 1-371
Cow position: chr3:57577406-57577786 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 36

Conread position: 1-372
Cow position: chr3:7566712-7566326 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 123

Conread position: 1-372
Cow position: chr3:49678829-49679223 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 234

Conread position: 1-372
Cow position: chr3:53909821-53910199 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 99

Conread position: 1-372
Cow position: chr3:83490783-83491176 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 260
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 235

Conread position: 1-373
Cow position: chr3:210029-210411 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 111

Conread position: 1-373
Cow position: chr3:11254445-11254076 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 66

Conread position: 1-373
Cow position: chr3:49650087-49650480 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 1-373
Cow position: chr3:53270533-53270922 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 228

Conread position: 1-373
Cow position: chr3:53384576-53384188 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 102

Conread position: 1-373
Cow position: chr3:68586745-68587113 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 80

Conread position: 1-379
Cow position: chr3:48252604-48252983 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 269
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 46, 67

Conread position: 1-382
Cow position: chr3:14552585-14552976 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 219

Conread position: 1-382
Cow position: chr3:37041136-37041519 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 124

Conread position: 1-382
Cow position: chr3:53112875-53113276 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 230

Conread position: 1-385
Cow position: chr3:73467330-73467739 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 20

Conread position: 1-394
Cow position: chr3:59604578-59604957 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 95

Conread position: 1-401
Cow position: chr3:1830858-1830456 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 77

Conread position: 2-321
Cow position: chr3:65800303-65800624 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 216

Conread position: 2-341
Cow position: chr3:75727881-75727523 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 340

Conread position: 2-371
Cow position: chr3:58766997-58767353 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 231, 36

Conread position: 2-372
Cow position: chr3:71497438-71497047 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 134

Conread position: 2-373
Cow position: chr3:55272332-55271953 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 37

Conread position: 2-381
Cow position: chr3:9663479-9663072 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 2-382
Cow position: chr3:11987038-11987430 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 115

Conread position: 2-382
Cow position: chr3:17222435-17222038 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 8

Conread position: 2-382
Cow position: chr3:59392399-59392027 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 61

Conread position: 3-256
Cow position: chr3:13118058-13118316 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 172

Conread position: 3-313
Cow position: chr3:69849793-69849480 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 102

Conread position: 3-326
Cow position: chr3:18854802-18855119 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 97

Conread position: 3-345
Cow position: chr3:70895755-70896111 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 203

Conread position: 3-347
Cow position: chr3:75711028-75711371 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 82

Conread position: 3-357
Cow position: chr3:72675796-72676166 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 228

Conread position: 3-362
Cow position: chr3:53739482-53739104 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 228

Conread position: 3-370
Cow position: chr3:72390794-72391171 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 34

Conread position: 3-372
Cow position: chr3:15229110-15228732 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 119

Conread position: 3-373
Cow position: chr3:14465995-14465615 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 75

Conread position: 3-373
Cow position: chr3:53150036-53150423 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 200

Conread position: 3-373
Cow position: chr3:56059516-56059903 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 100

Conread position: 3-374
Cow position: chr3:3985039-3985415 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 23, 123

Conread position: 3-374
Cow position: chr3:78076898-78077283 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 191

Conread position: 3-380
Cow position: chr3:55970216-55970605 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 222

Conread position: 3-381
Cow position: chr3:65413566-65413177 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 79

Conread position: 3-382
Cow position: chr3:5101051-5100671 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 48

Conread position: 3-382
Cow position: chr3:10958519-10958139 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 143

Conread position: 3-382
Cow position: chr3:23169361-23168965 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 21, 206

Conread position: 3-388
Cow position: chr3:14626441-14626043 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 103

Conread position: 3-400
Cow position: chr3:42480333-42480737 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 257
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 97

Conread position: 4-333
Cow position: chr3:54050309-54049980 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 90

Conread position: 4-359
Cow position: chr3:5096913-5097284 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 113

Conread position: 4-373
Cow position: chr3:29360425-29360059 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 66

Conread position: 4-382
Cow position: chr3:23471758-23471357 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 194

Conread position: 4-382
Cow position: chr3:50762833-50763220 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 246
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 222

Conread position: 4-382
Cow position: chr3:63179578-63179955 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 108

Conread position: 5-326
Cow position: chr3:73961970-73961653 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 81

Conread position: 5-373
Cow position: chr3:29596106-29596482 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 120

Conread position: 6-358
Cow position: chr3:74533060-74533424 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 20, 176

Conread position: 6-367
Cow position: chr3:38346913-38347276 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 20, 133

Conread position: 6-370
Cow position: chr3:37186548-37186915 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 117

Conread position: 6-370
Cow position: chr3:50614355-50614730 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 237
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 143, 99

Conread position: 6-370
Cow position: chr3:51234379-51234007 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 21

Conread position: 6-371
Cow position: chr3:79292546-79292917 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 120

Conread position: 6-372
Cow position: chr3:59648973-59649348 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 44

Conread position: 6-382
Cow position: chr3:30179794-30180187 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 121

Conread position: 6-385
Cow position: chr3:73708766-73709150 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 31

Conread position: 7-373
Cow position: chr3:4049926-4050285 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 74

Conread position: 7-382
Cow position: chr3:18066847-18067233 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 285

Conread position: 8-342
Cow position: chr3:71161508-71161859 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 293

Conread position: 8-368
Cow position: chr3:17935209-17934851 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 96

Conread position: 9-358
Cow position: chr3:5374051-5374403 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 5

Conread position: 9-380
Cow position: chr3:65058417-65058796 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 66

Conread position: 9-382
Cow position: chr3:12712208-12711814 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 222

Conread position: 10-334
Cow position: chr3:80818449-80818769 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 194, 53

Conread position: 10-373
Cow position: chr3:59208530-59208886 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 151

Conread position: 10-382
Cow position: chr3:15387927-15388320 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 211

Conread position: 12-370
Cow position: chr3:80564681-80565055 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 79

Conread position: 12-382
Cow position: chr3:52863465-52863082 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 16-381
Cow position: chr3:49482982-49482617 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 31

Conread position: 18-382
Cow position: chr3:13302129-13301750 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 12, 106

Conread position: 20-373
Cow position: chr3:15052211-15051861 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 136, 25

Conread position: 20-382
Cow position: chr3:75050891-75050517 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 163

Conread position: 21-320
Cow position: chr3:20437915-20437618 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 134, 75

Conread position: 21-358
Cow position: chr3:68303058-68303390 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 143

Conread position: 21-375
Cow position: chr3:67744898-67744534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 142

Conread position: 21-380
Cow position: chr3:54945855-54946230 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 25

Conread position: 21-382
Cow position: chr3:23408612-23408257 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 17

Conread position: 21-382
Cow position: chr3:57624193-57624565 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 97

Conread position: 21-385
Cow position: chr3:29812974-29813336 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 102, 202

Conread position: 21-433
Cow position: chr3:39066063-39066487 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 262
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 153

Conread position: 23-334
Cow position: chr3:29507329-29507634 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 205, 146

Conread position: 23-382
Cow position: chr3:67704273-67704647 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 27-372
Cow position: chr3:66292441-66292085 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 11

Conread position: 27-384
Cow position: chr3:45881646-45882001 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 189

Conread position: 28-256
Cow position: chr3:27544591-27544360 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 95

Conread position: 28-326
Cow position: chr3:60933153-60933461 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 160

Conread position: 28-341
Cow position: chr3:31419439-31419751 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 131, 84

Conread position: 28-362
Cow position: chr3:49327682-49328024 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 19

Conread position: 28-369
Cow position: chr3:525092-525434 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 73

Conread position: 28-369
Cow position: chr3:51578583-51578238 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 89

Conread position: 28-372
Cow position: chr3:17456531-17456181 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 175

Conread position: 28-373
Cow position: chr3:53046919-53046571 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 98

Conread position: 28-378
Cow position: chr3:28908457-28908106 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 139, 73

Conread position: 28-381
Cow position: chr3:73460717-73461066 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 19

Conread position: 28-395
Cow position: chr3:65236763-65237139 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 58

Conread position: 29-326
Cow position: chr3:45279196-45279510 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 133

Conread position: 31-372
Cow position: chr3:44101723-44102058 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 127, 51

Conread position: 31-373
Cow position: chr3:82020103-82019747 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 131

Conread position: 31-380
Cow position: chr3:7338033-7337685 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 77, 134

Conread position: 32-369
Cow position: chr3:38691664-38691318 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 128, 189

Conread position: 32-382
Cow position: chr3:8733591-8733258 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 325, 15

Conread position: 33-373
Cow position: chr3:56476425-56476774 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 75

Conread position: 33-385
Cow position: chr3:3556287-3556649 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 17

Conread position: 34-370
Cow position: chr3:18686660-18686995 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 130, 51

Conread position: 34-372
Cow position: chr3:2680255-2680604 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 194

Conread position: 37-341
Cow position: chr3:5045063-5044754 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 138

Conread position: 37-382
Cow position: chr3:70334956-70334594 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 29

Conread position: 38-386
Cow position: chr3:25754784-25755125 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 196, 82

Conread position: 41-334
Cow position: chr3:74878838-74878537 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 33

Conread position: 42-372
Cow position: chr3:43233255-43233597 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 191

Conread position: 43-373
Cow position: chr3:3738237-3738573 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 66, 194

Conread position: 44-351
Cow position: chr3:23445136-23444819 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 63

Conread position: 44-371
Cow position: chr3:11711707-11712055 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 18

Conread position: 48-373
Cow position: chr3:55836071-55835728 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 158

Conread position: 51-382
Cow position: chr3:81087848-81087538 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 288, 10

Conread position: 55-382
Cow position: chr3:67930412-67930084 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 30

Conread position: 59-372
Cow position: chr3:17134108-17134425 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 63

Conread position: 59-373
Cow position: chr3:78092740-78092420 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 10

Conread position: 59-382
Cow position: chr3:17447839-17447514 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 78

Conread position: 60-380
Cow position: chr3:13507233-13507567 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 71

Conread position: 61-382
Cow position: chr3:59621865-59621547 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 14

Conread position: 62-325
Cow position: chr3:68146064-68145800 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 39

Conread position: 63-378
Cow position: chr3:15506220-15506545 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 115

Conread position: 68-382
Cow position: chr3:43571518-43571849 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 212
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 154

Conread position: 72-349
Cow position: chr3:78896430-78896714 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 127

Conread position: 73-315
Cow position: chr3:35005560-35005809 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 60

Conread position: 74-370
Cow position: chr3:4319494-4319800 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 152

Conread position: 74-382
Cow position: chr3:45211079-45211402 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 115

Conread position: 85-387
Cow position: chr3:27697188-27696872 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 143

Conread position: 86-382
Cow position: chr3:49791018-49790711 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 18

Conread position: 89-333
Cow position: chr3:83727452-83727200 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 133

Conread position: 89-373
Cow position: chr3:57760297-57760590 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 140

Conread position: 92-337
Cow position: chr3:38035790-38035535 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 96-372
Cow position: chr3:53875953-53875674 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 97

Conread position: 100-367
Cow position: chr3:34669918-34669647 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 167

Conread position: 103-373
Cow position: chr3:19198800-19199077 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 56

Conread position: 104-372
Cow position: chr3:75687625-75687347 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 119

Conread position: 105-364
Cow position: chr3:74502507-74502242 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 63

Conread position: 105-372
Cow position: chr3:54374046-54373769 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 119

Conread position: 105-382
Cow position: chr3:20678020-20677741 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 53

Conread position: 108-369
Cow position: chr3:84597142-84596877 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 76

Conread position: 109-362
Cow position: chr3:26981883-26982138 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 112

Conread position: 109-373
Cow position: chr3:76268161-76267883 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 13

Conread position: 109-375
Cow position: chr3:35153440-35153711 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 90

Conread position: 116-382
Cow position: chr3:60264888-60264615 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 5

Conread position: 122-370
Cow position: chr3:48810805-48810556 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 36

Conread position: 126-382
Cow position: chr3:59884237-59883967 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 97

Conread position: 127-372
Cow position: chr3:59040409-59040658 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 244

Conread position: 127-373
Cow position: chr3:53508458-53508703 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 30

Conread position: 132-382
Cow position: chr3:15153534-15153792 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 26

Conread position: 133-372
Cow position: chr3:24468536-24468294 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 89

Conread position: 133-382
Cow position: chr3:15951061-15950814 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 50

Conread position: 144-373
Cow position: chr3:72504037-72503804 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 39

Conread position: 144-382
Cow position: chr3:19793734-19793490 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 72

Conread position: 148-374
Cow position: chr3:51033233-51033459 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 50

Conread position: 152-401
Cow position: chr3:15443863-15443609 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 65

Conread position: 154-381
Cow position: chr3:54100852-54100626 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 63

Conread position: 167-382
Cow position: chr3:70334081-70333871 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 49

Conread position: 167-384
Cow position: chr3:73820487-73820268 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 34

Conread position: 169-391
Cow position: chr3:3656400-3656624 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 216

Conread position: 184-382
Cow position: chr3:18059603-18059804 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 24

Conread position: 185-358
Cow position: chr3:46541925-46541753 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 22

Conread position: 186-382
Cow position: chr3:75238361-75238558 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 28

Conread position: 192-376
Cow position: chr3:66631441-66631256 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 22

Conread position: 195-373
Cow position: chr3:11640641-11640825 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 5

Conread position: 195-382
Cow position: chr3:23203323-23203131 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 19

Conread position: 195-391
Cow position: chr3:27976616-27976416 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 21

Conread position: 196-382
Cow position: chr3:74900725-74900542 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 161, 34

Show alignments to all cow chromosomes.