Cow genome map
| Conread name: | Pig2-106O01 |
| Conread position: | 1-257 |
| Cow position: | chr5:6130112-6130379 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 219 |
| Conread position: | 1-315 |
| Cow position: | chr5:34638641-34638967 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 1-317 |
| Cow position: | chr5:45170118-45170444 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 229 |
| Conread position: | 1-325 |
| Cow position: | chr5:65601216-65601550 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 174 |
| Conread position: | 1-326 |
| Cow position: | chr5:3281587-3281929 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 1-326 |
| Cow position: | chr5:47704379-47704032 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 1-333 |
| Cow position: | chr5:26133318-26132996 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 1-333 |
| Cow position: | chr5:61576295-61576646 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 209 |
| Conread position: | 1-336 |
| Cow position: | chr5:21524920-21525263 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 1-357 |
| Cow position: | chr5:12873500-12873876 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 1-358 |
| Cow position: | chr5:29903766-29903397 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 1-368 |
| Cow position: | chr5:29827809-29828183 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 1-369 |
| Cow position: | chr5:34442037-34441642 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 1-370 |
| Cow position: | chr5:7193188-7193555 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 1-371 |
| Cow position: | chr5:47317212-47316834 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 1-371 |
| Cow position: | chr5:50533628-50533248 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 1-372 |
| Cow position: | chr5:30276451-30276831 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 1-372 |
| Cow position: | chr5:50722806-50723187 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 1-372 |
| Cow position: | chr5:65887258-65886870 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 212 |
| Conread position: | 1-372 |
| Cow position: | chr5:66257398-66257779 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 1-373 |
| Cow position: | chr5:5111321-5110927 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 23, 142 |
| Conread position: | 1-373 |
| Cow position: | chr5:28302984-28302601 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 1-373 |
| Cow position: | chr5:29771274-29771670 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-373 |
| Cow position: | chr5:34528317-34528688 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 1-378 |
| Cow position: | chr5:64321504-64321902 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 234 |
| Conread position: | 1-382 |
| Cow position: | chr5:58519643-58519265 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 1-382 |
| Cow position: | chr5:66366287-66366660 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 1-385 |
| Cow position: | chr5:6528436-6528839 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 174 |
| Conread position: | 1-401 |
| Cow position: | chr5:42063959-42064375 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 2-318 |
| Cow position: | chr5:59082435-59082108 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 218 |
| Conread position: | 2-345 |
| Cow position: | chr5:31640184-31640538 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 161 |
| Conread position: | 2-356 |
| Cow position: | chr5:24348868-24349231 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 2-373 |
| Cow position: | chr5:56523931-56524316 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 2-382 |
| Cow position: | chr5:26097054-26097439 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 2-382 |
| Cow position: | chr5:54875923-54875544 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 2-399 |
| Cow position: | chr5:65776628-65776215 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 3-272 |
| Cow position: | chr5:65593639-65593912 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 3-322 |
| Cow position: | chr5:56467462-56467781 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 108 |
| Conread position: | 3-324 |
| Cow position: | chr5:20407905-20407586 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 170, 175 |
| Conread position: | 3-325 |
| Cow position: | chr5:34049867-34050211 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-328 |
| Cow position: | chr5:26370465-26370779 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 3-333 |
| Cow position: | chr5:5938082-5938423 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 225 |
| Conread position: | 3-350 |
| Cow position: | chr5:52645320-52644962 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 3-351 |
| Cow position: | chr5:50637589-50637940 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 3-358 |
| Cow position: | chr5:15598476-15598112 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 3-358 |
| Cow position: | chr5:58855862-58856228 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 223 |
| Conread position: | 3-373 |
| Cow position: | chr5:9894369-9893982 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 3-373 |
| Cow position: | chr5:12323039-12322663 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 164, 154 |
| Conread position: | 3-373 |
| Cow position: | chr5:55967125-55966741 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 368 |
| Conread position: | 3-380 |
| Cow position: | chr5:39447774-39447383 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 160 |
| Conread position: | 3-382 |
| Cow position: | chr5:26477235-26476867 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 3-382 |
| Cow position: | chr5:35684692-35685088 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 162 |
| Conread position: | 3-382 |
| Cow position: | chr5:69337590-69337971 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 3-385 |
| Cow position: | chr5:1247037-1247417 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 3-394 |
| Cow position: | chr5:47601575-47601976 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 228 |
| Conread position: | 4-368 |
| Cow position: | chr5:37814382-37814763 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 4-370 |
| Cow position: | chr5:27103026-27102655 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 4-373 |
| Cow position: | chr5:44796959-44796591 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 4-374 |
| Cow position: | chr5:32394361-32394741 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 194 |
| Conread position: | 4-382 |
| Cow position: | chr5:2309803-2309407 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 26, 227 |
| Conread position: | 5-351 |
| Cow position: | chr5:58793855-58793488 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 5-358 |
| Cow position: | chr5:64139323-64139686 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 222 |
| Conread position: | 5-370 |
| Cow position: | chr5:65941493-65941112 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 5-371 |
| Cow position: | chr5:37646792-37646404 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 5-381 |
| Cow position: | chr5:11668420-11668035 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 6-271 |
| Cow position: | chr5:30639089-30638824 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 6-369 |
| Cow position: | chr5:34887437-34887057 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 6-375 |
| Cow position: | chr5:360182-359795 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 36 |
| Conread position: | 6-382 |
| Cow position: | chr5:44752549-44752156 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 6-382 |
| Cow position: | chr5:45845934-45845537 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 26, 364 |
| Conread position: | 7-351 |
| Cow position: | chr5:41129527-41129861 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 7-374 |
| Cow position: | chr5:63987685-63987303 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 7-382 |
| Cow position: | chr5:26094407-26094015 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 220 |
| Conread position: | 7-382 |
| Cow position: | chr5:35208023-35208412 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 19, 222 |
| Conread position: | 8-370 |
| Cow position: | chr5:20127817-20128192 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 10-384 |
| Cow position: | chr5:41164853-41165241 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 21-368 |
| Cow position: | chr5:67932682-67932335 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 21-373 |
| Cow position: | chr5:36868524-36868877 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 21-382 |
| Cow position: | chr5:30253524-30253892 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 21-382 |
| Cow position: | chr5:56028751-56028390 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 88, 157 |
| Conread position: | 22-382 |
| Cow position: | chr5:35969323-35969683 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 134 |
| Conread position: | 23-358 |
| Cow position: | chr5:45803843-45804185 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 23-387 |
| Cow position: | chr5:28229939-28230320 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 25-373 |
| Cow position: | chr5:11427457-11427093 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 26-373 |
| Cow position: | chr5:57736899-57737241 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 141, 81 |
| Conread position: | 26-382 |
| Cow position: | chr5:54311118-54311487 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 37 |
| Conread position: | 28-289 |
| Cow position: | chr5:32378656-32378903 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 30 |
| Conread position: | 28-351 |
| Cow position: | chr5:32697026-32696704 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 28-369 |
| Cow position: | chr5:62172205-62172549 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 128, 80 |
| Conread position: | 28-370 |
| Cow position: | chr5:71454809-71454473 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 131 |
| Conread position: | 28-372 |
| Cow position: | chr5:17063307-17062940 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 28-373 |
| Cow position: | chr5:64176334-64175984 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 85, 150 |
| Conread position: | 28-374 |
| Cow position: | chr5:57074548-57074188 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 95, 181 |
| Conread position: | 28-382 |
| Cow position: | chr5:25495551-25495207 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 28-382 |
| Cow position: | chr5:56070640-56071011 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 28-394 |
| Cow position: | chr5:16938221-16937868 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 28-394 |
| Cow position: | chr5:21617242-21617621 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 79, 196 |
| Conread position: | 29-382 |
| Cow position: | chr5:26467408-26467779 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 31-301 |
| Cow position: | chr5:21964083-21964358 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 31-334 |
| Cow position: | chr5:31918444-31918744 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 31-373 |
| Cow position: | chr5:71494606-71494963 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 197 |
| Conread position: | 31-382 |
| Cow position: | chr5:17999705-17999345 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 120, 197 |
| Conread position: | 32-326 |
| Cow position: | chr5:64137042-64137350 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 172 |
| Conread position: | 32-382 |
| Cow position: | chr5:4710352-4710001 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 32-382 |
| Cow position: | chr5:43992116-43992475 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 32-382 |
| Cow position: | chr5:74858364-74858726 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 189 |
| Conread position: | 33-372 |
| Cow position: | chr5:34463794-34463439 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 319 |
| Conread position: | 33-373 |
| Cow position: | chr5:458273-458630 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 199 |
| Conread position: | 33-380 |
| Cow position: | chr5:4280255-4280597 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 75 |
| Conread position: | 33-400 |
| Cow position: | chr5:64758972-64758601 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 37-308 |
| Cow position: | chr5:35449049-35449312 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 130, 121 |
| Conread position: | 44-326 |
| Cow position: | chr5:57591492-57591782 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 47-358 |
| Cow position: | chr5:7044904-7044579 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 48-370 |
| Cow position: | chr5:22643411-22643093 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 51-369 |
| Cow position: | chr5:4220790-4221116 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 175 |
| Conread position: | 59-358 |
| Cow position: | chr5:57575583-57575899 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 59-369 |
| Cow position: | chr5:5855697-5855996 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 110, 48 |
| Conread position: | 59-373 |
| Cow position: | chr5:47323268-47323604 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 40, 178 |
| Conread position: | 59-386 |
| Cow position: | chr5:37808847-37808508 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 64-350 |
| Cow position: | chr5:6286604-6286315 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 69-364 |
| Cow position: | chr5:59115208-59115513 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 160 |
| Conread position: | 71-383 |
| Cow position: | chr5:56014564-56014882 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 115 |
| Conread position: | 74-332 |
| Cow position: | chr5:69520723-69520991 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 74-373 |
| Cow position: | chr5:30950087-30949773 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 137 |
| Conread position: | 78-377 |
| Cow position: | chr5:16214524-16214833 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 141 |
| Conread position: | 89-375 |
| Cow position: | chr5:66581811-66582107 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 135 |
| Conread position: | 89-382 |
| Cow position: | chr5:35247263-35246959 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 125 |
| Conread position: | 92-369 |
| Cow position: | chr5:12761265-12760983 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 96-348 |
| Cow position: | chr5:65883921-65883656 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 96-382 |
| Cow position: | chr5:66972282-66972580 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 72, 127 |
| Conread position: | 96-393 |
| Cow position: | chr5:61006939-61007227 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 137, 61 |
| Conread position: | 105-370 |
| Cow position: | chr5:64027144-64026880 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 105-381 |
| Cow position: | chr5:73168134-73167862 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 108-381 |
| Cow position: | chr5:44447001-44446715 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 109-382 |
| Cow position: | chr5:45273633-45273351 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 110-371 |
| Cow position: | chr5:64140399-64140678 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 110-382 |
| Cow position: | chr5:63427137-63426854 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 114-382 |
| Cow position: | chr5:18289002-18289273 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 122-382 |
| Cow position: | chr5:23678822-23678552 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 123-381 |
| Cow position: | chr5:58446685-58446956 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 126-372 |
| Cow position: | chr5:12901800-12902058 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 129-372 |
| Cow position: | chr5:33560846-33560593 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 134-370 |
| Cow position: | chr5:57768090-57767848 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 145-372 |
| Cow position: | chr5:61492006-61492234 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 148-380 |
| Cow position: | chr5:50575697-50575932 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 164-371 |
| Cow position: | chr5:11769197-11769409 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 167-382 |
| Cow position: | chr5:41294013-41294232 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 167-398 |
| Cow position: | chr5:1087264-1087038 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 188-371 |
| Cow position: | chr5:49501870-49501684 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 196-388 |
| Cow position: | chr5:55796002-55795809 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 211-381 |
| Cow position: | chr5:58555111-58555287 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 216-381 |
| Cow position: | chr5:59627085-59627250 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 231-394 |
| Cow position: | chr5:56613565-56613397 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 0 |
Show alignments to all cow chromosomes.