Cow genome map
| Conread name: | Pig2-106O01 |
| Conread position: | 1-224 |
| Cow position: | chr6:24327365-24327137 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 1-258 |
| Cow position: | chr6:16737791-16738059 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 221 |
| Conread position: | 1-278 |
| Cow position: | chr6:12387550-12387267 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 1-279 |
| Cow position: | chr6:50445989-50445705 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 134, 221 |
| Conread position: | 1-286 |
| Cow position: | chr6:36928422-36928729 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-320 |
| Cow position: | chr6:48169715-48170040 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 1-320 |
| Cow position: | chr6:48281765-48282094 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 1-327 |
| Cow position: | chr6:29210272-29210604 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 1-333 |
| Cow position: | chr6:1770425-1770083 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 1-341 |
| Cow position: | chr6:2607383-2607729 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 232 |
| Conread position: | 1-343 |
| Cow position: | chr6:32121681-32122032 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 177 |
| Conread position: | 1-358 |
| Cow position: | chr6:4864768-4864407 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 1-358 |
| Cow position: | chr6:24031145-24031515 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 208 |
| Conread position: | 1-358 |
| Cow position: | chr6:37634560-37634935 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 1-369 |
| Cow position: | chr6:26728756-26728381 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 228 |
| Conread position: | 1-370 |
| Cow position: | chr6:11169478-11169855 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 1-370 |
| Cow position: | chr6:13688041-13687661 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 1-370 |
| Cow position: | chr6:17414683-17414292 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 1-370 |
| Cow position: | chr6:34475773-34475407 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 1-370 |
| Cow position: | chr6:52478657-52478258 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-370 |
| Cow position: | chr6:67214512-67214902 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 1-371 |
| Cow position: | chr6:28482785-28483170 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 235 |
| Conread position: | 1-372 |
| Cow position: | chr6:34251505-34251145 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 168, 56 |
| Conread position: | 1-373 |
| Cow position: | chr6:7801595-7801241 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 1-373 |
| Cow position: | chr6:53933070-53932692 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 1-373 |
| Cow position: | chr6:64431709-64432094 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-374 |
| Cow position: | chr6:6060787-6060415 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 1-379 |
| Cow position: | chr6:42565456-42565849 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 1-381 |
| Cow position: | chr6:35103557-35103164 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 1-381 |
| Cow position: | chr6:38853888-38853495 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 209 |
| Conread position: | 1-382 |
| Cow position: | chr6:6201215-6201589 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 61 |
| Conread position: | 1-382 |
| Cow position: | chr6:10176531-10176137 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 230 |
| Conread position: | 1-382 |
| Cow position: | chr6:26915100-26915492 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 1-382 |
| Cow position: | chr6:32125837-32126220 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 1-382 |
| Cow position: | chr6:39093533-39093915 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 183, 42 |
| Conread position: | 1-382 |
| Cow position: | chr6:40031964-40032355 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 1-382 |
| Cow position: | chr6:46557828-46558222 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 1-382 |
| Cow position: | chr6:46570890-46571271 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 1-382 |
| Cow position: | chr6:54365553-54365167 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 1-382 |
| Cow position: | chr6:54867281-54867682 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 1-382 |
| Cow position: | chr6:67187465-67187849 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 1-392 |
| Cow position: | chr6:35842431-35842831 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 148, 84 |
| Conread position: | 2-321 |
| Cow position: | chr6:52248362-52248027 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 2-370 |
| Cow position: | chr6:61631848-61631456 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 2-375 |
| Cow position: | chr6:15305357-15305726 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 94 |
| Conread position: | 2-386 |
| Cow position: | chr6:35990451-35990065 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 2-394 |
| Cow position: | chr6:23695769-23696178 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 3-369 |
| Cow position: | chr6:6343198-6343582 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 228 |
| Conread position: | 3-369 |
| Cow position: | chr6:18049253-18048869 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 3-370 |
| Cow position: | chr6:323534-323152 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 3-373 |
| Cow position: | chr6:3952297-3952674 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 3-382 |
| Cow position: | chr6:2547015-2547421 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 3-382 |
| Cow position: | chr6:5095778-5095377 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 3-382 |
| Cow position: | chr6:21004428-21004840 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 231 |
| Conread position: | 3-382 |
| Cow position: | chr6:24468620-24468231 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 3-384 |
| Cow position: | chr6:60350527-60350121 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 231 |
| Conread position: | 3-394 |
| Cow position: | chr6:44194773-44194374 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 4-369 |
| Cow position: | chr6:15938075-15937703 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 108, 59 |
| Conread position: | 4-373 |
| Cow position: | chr6:9452996-9452614 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 105, 222 |
| Conread position: | 4-373 |
| Cow position: | chr6:18447735-18447362 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 4-374 |
| Cow position: | chr6:49398843-49398462 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 204 |
| Conread position: | 4-382 |
| Cow position: | chr6:39358567-39358179 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 5-382 |
| Cow position: | chr6:528503-528118 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 6-289 |
| Cow position: | chr6:21542095-21542394 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-298 |
| Cow position: | chr6:60239613-60239313 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 6-382 |
| Cow position: | chr6:13367070-13367450 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 6-400 |
| Cow position: | chr6:36652200-36652605 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 7-352 |
| Cow position: | chr6:31535794-31535435 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 7-369 |
| Cow position: | chr6:5302628-5302268 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 7-372 |
| Cow position: | chr6:6063503-6063140 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 7-373 |
| Cow position: | chr6:19681744-19681369 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 12-370 |
| Cow position: | chr6:14949700-14949328 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 201 |
| Conread position: | 15-328 |
| Cow position: | chr6:22503134-22502801 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 15-382 |
| Cow position: | chr6:35993364-35993746 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 193 |
| Conread position: | 21-321 |
| Cow position: | chr6:35415728-35415412 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 21-327 |
| Cow position: | chr6:38614617-38614921 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 21-358 |
| Cow position: | chr6:1886869-1886527 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 146, 78 |
| Conread position: | 21-373 |
| Cow position: | chr6:8965883-8966253 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 21-373 |
| Cow position: | chr6:38207702-38207336 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 200 |
| Conread position: | 21-373 |
| Cow position: | chr6:46865799-46865436 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 21-373 |
| Cow position: | chr6:53651833-53652196 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 21-374 |
| Cow position: | chr6:35435796-35436151 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 21-381 |
| Cow position: | chr6:38771089-38771444 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 21-382 |
| Cow position: | chr6:47339556-47339191 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 21-430 |
| Cow position: | chr6:7989620-7989206 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 23-362 |
| Cow position: | chr6:7190323-7189974 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 141, 116 |
| Conread position: | 23-367 |
| Cow position: | chr6:36470767-36470412 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 137, 85 |
| Conread position: | 27-326 |
| Cow position: | chr6:65702601-65702305 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 27-351 |
| Cow position: | chr6:456987-457307 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 28-326 |
| Cow position: | chr6:55546359-55546067 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 212, 32 |
| Conread position: | 28-354 |
| Cow position: | chr6:23248162-23247830 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 250 |
| Conread position: | 28-370 |
| Cow position: | chr6:38641299-38641645 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 80 |
| Conread position: | 28-373 |
| Cow position: | chr6:15301016-15300679 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 28-373 |
| Cow position: | chr6:59069827-59069464 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 196 |
| Conread position: | 28-377 |
| Cow position: | chr6:9008810-9008452 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 121, 194 |
| Conread position: | 28-379 |
| Cow position: | chr6:17997514-17997158 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 193 |
| Conread position: | 31-364 |
| Cow position: | chr6:47305143-47305486 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 136, 190 |
| Conread position: | 31-373 |
| Cow position: | chr6:21110774-21111107 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 88 |
| Conread position: | 32-373 |
| Cow position: | chr6:6400753-6401106 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 33-321 |
| Cow position: | chr6:20157130-20157436 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 199 |
| Conread position: | 43-382 |
| Cow position: | chr6:1703630-1703961 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 119 |
| Conread position: | 46-372 |
| Cow position: | chr6:44566231-44566578 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 47-370 |
| Cow position: | chr6:47574725-47575059 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 179 |
| Conread position: | 52-328 |
| Cow position: | chr6:30973866-30974152 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 52-372 |
| Cow position: | chr6:12668933-12669249 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 52-382 |
| Cow position: | chr6:8125157-8125491 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 59-372 |
| Cow position: | chr6:60819347-60819667 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 105, 167 |
| Conread position: | 59-382 |
| Cow position: | chr6:65264703-65264381 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 60-382 |
| Cow position: | chr6:16764809-16764481 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 63-327 |
| Cow position: | chr6:60783706-60783979 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 64-401 |
| Cow position: | chr6:14914402-14914052 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 68-343 |
| Cow position: | chr6:55763695-55763978 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 61 |
| Conread position: | 68-358 |
| Cow position: | chr6:27888189-27888491 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 69-382 |
| Cow position: | chr6:19264658-19264334 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 160 |
| Conread position: | 71-382 |
| Cow position: | chr6:60739859-60740179 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 152 |
| Conread position: | 74-346 |
| Cow position: | chr6:61608354-61608640 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 132 |
| Conread position: | 74-372 |
| Cow position: | chr6:67323163-67323464 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 75, 133 |
| Conread position: | 75-381 |
| Cow position: | chr6:4692136-4691812 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 34, 152 |
| Conread position: | 79-326 |
| Cow position: | chr6:54036283-54036035 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 79-398 |
| Cow position: | chr6:46283146-46282821 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 89-351 |
| Cow position: | chr6:38609830-38610101 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 67, 151 |
| Conread position: | 89-372 |
| Cow position: | chr6:19996482-19996767 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 89-391 |
| Cow position: | chr6:43135082-43134765 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 91-370 |
| Cow position: | chr6:17313599-17313886 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 91-373 |
| Cow position: | chr6:38640096-38640389 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 5 |
| Conread position: | 91-382 |
| Cow position: | chr6:60118010-60118312 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 95-370 |
| Cow position: | chr6:62669742-62670018 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 97-351 |
| Cow position: | chr6:20206146-20206408 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 100-385 |
| Cow position: | chr6:45065141-45064849 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 101-368 |
| Cow position: | chr6:23402115-23401842 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 101-380 |
| Cow position: | chr6:35725969-35726258 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 145 |
| Conread position: | 109-382 |
| Cow position: | chr6:5330306-5330576 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 115-370 |
| Cow position: | chr6:20605859-20606112 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 115-373 |
| Cow position: | chr6:10039609-10039879 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 133-382 |
| Cow position: | chr6:17794850-17794599 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 165-373 |
| Cow position: | chr6:2584888-2585098 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 167-369 |
| Cow position: | chr6:8599951-8600151 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 167-380 |
| Cow position: | chr6:37395462-37395237 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 181-382 |
| Cow position: | chr6:2153636-2153434 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 184-373 |
| Cow position: | chr6:51530221-51530032 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 190-373 |
| Cow position: | chr6:55502737-55502922 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 195-382 |
| Cow position: | chr6:56986668-56986486 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 158, 5 |
| Conread position: | 231-380 |
| Cow position: | chr6:21475740-21475889 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-382 |
| Cow position: | chr6:2078802-2078648 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
Show alignments to all cow chromosomes.