Cow genome map
| Conread name: | Pig2-106O01 |
| Conread position: | 1-151 |
| Cow position: | chr9:22616918-22616769 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1-154 |
| Cow position: | chr9:9491088-9490937 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:15982779-15983111 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 1-326 |
| Cow position: | chr9:20681107-20681445 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 1-326 |
| Cow position: | chr9:21030616-21030269 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-328 |
| Cow position: | chr9:49982798-49983130 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 1-343 |
| Cow position: | chr9:13221594-13221948 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 1-358 |
| Cow position: | chr9:11299398-11299751 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 1-362 |
| Cow position: | chr9:59386481-59386845 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 1-368 |
| Cow position: | chr9:28747223-28747602 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 1-369 |
| Cow position: | chr9:54681800-54681427 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 1-371 |
| Cow position: | chr9:26404088-26403700 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-372 |
| Cow position: | chr9:5763331-5763716 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 196 |
| Conread position: | 1-372 |
| Cow position: | chr9:20942313-20942702 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 1-372 |
| Cow position: | chr9:48564394-48563993 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 122 |
| Conread position: | 1-373 |
| Cow position: | chr9:26057153-26057517 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 1-373 |
| Cow position: | chr9:29184835-29185224 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 227 |
| Conread position: | 1-373 |
| Cow position: | chr9:38793318-38792931 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 250 |
| Conread position: | 1-373 |
| Cow position: | chr9:43871271-43870888 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 1-373 |
| Cow position: | chr9:53412950-53413325 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 193 |
| Conread position: | 1-373 |
| Cow position: | chr9:56032030-56032403 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 1-374 |
| Cow position: | chr9:54716327-54716689 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 137, 59 |
| Conread position: | 1-374 |
| Cow position: | chr9:55074836-55075216 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 1-375 |
| Cow position: | chr9:13169374-13169751 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 1-377 |
| Cow position: | chr9:5246147-5245762 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 31, 110 |
| Conread position: | 1-380 |
| Cow position: | chr9:50080747-50081134 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 226 |
| Conread position: | 1-381 |
| Cow position: | chr9:22318637-22318257 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 1-382 |
| Cow position: | chr9:1520430-1520835 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 1-382 |
| Cow position: | chr9:8998654-8998253 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 1-382 |
| Cow position: | chr9:9199486-9199875 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 30, 218 |
| Conread position: | 1-382 |
| Cow position: | chr9:17410890-17411289 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 1-382 |
| Cow position: | chr9:18215615-18216005 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 1-382 |
| Cow position: | chr9:19903351-19902986 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 1-382 |
| Cow position: | chr9:22443313-22443722 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 31, 241 |
| Conread position: | 1-382 |
| Cow position: | chr9:50976947-50977349 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 29, 222 |
| Conread position: | 1-383 |
| Cow position: | chr9:35167467-35167079 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 1-385 |
| Cow position: | chr9:4646034-4646422 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 166, 40 |
| Conread position: | 1-391 |
| Cow position: | chr9:54528814-54528409 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 1-394 |
| Cow position: | chr9:37017183-37016789 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 25, 172 |
| Conread position: | 1-466 |
| Cow position: | chr9:32676981-32676502 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 206 |
| Conread position: | 2-341 |
| Cow position: | chr9:35904453-35904799 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 2-373 |
| Cow position: | chr9:5218882-5219259 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 2-373 |
| Cow position: | chr9:64050262-64050648 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 2-382 |
| Cow position: | chr9:8534388-8534792 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 227 |
| Conread position: | 2-383 |
| Cow position: | chr9:5501147-5500757 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 2-399 |
| Cow position: | chr9:52407468-52407059 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 228 |
| Conread position: | 3-234 |
| Cow position: | chr9:32396240-32395997 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 202 |
| Conread position: | 3-326 |
| Cow position: | chr9:53257767-53258093 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 152, 109 |
| Conread position: | 3-341 |
| Cow position: | chr9:648072-647723 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 3-369 |
| Cow position: | chr9:5433928-5433549 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 101 |
| Conread position: | 3-382 |
| Cow position: | chr9:15215384-15215783 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 201 |
| Conread position: | 3-382 |
| Cow position: | chr9:16300277-16300664 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 3-382 |
| Cow position: | chr9:29006857-29006462 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 3-382 |
| Cow position: | chr9:42445688-42446078 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 4-257 |
| Cow position: | chr9:1950212-1949951 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 4-373 |
| Cow position: | chr9:9405759-9406140 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 4-382 |
| Cow position: | chr9:26278881-26279265 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 218 |
| Conread position: | 4-387 |
| Cow position: | chr9:5327547-5327157 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 5-373 |
| Cow position: | chr9:4861684-4861297 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 5-373 |
| Cow position: | chr9:55287600-55287976 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 5-381 |
| Cow position: | chr9:44467054-44467435 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 21, 160 |
| Conread position: | 6-257 |
| Cow position: | chr9:34000319-34000590 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 20, 207 |
| Conread position: | 6-317 |
| Cow position: | chr9:38344189-38343860 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 225 |
| Conread position: | 6-327 |
| Cow position: | chr9:48106825-48107156 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 6-346 |
| Cow position: | chr9:35850192-35849845 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 6-368 |
| Cow position: | chr9:20416218-20416588 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 37, 158 |
| Conread position: | 6-373 |
| Cow position: | chr9:9552381-9552004 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 215 |
| Conread position: | 7-257 |
| Cow position: | chr9:64516804-64517069 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 7-370 |
| Cow position: | chr9:17310269-17310645 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 7-370 |
| Cow position: | chr9:44710114-44709745 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 7-401 |
| Cow position: | chr9:64559596-64559997 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 122 |
| Conread position: | 8-382 |
| Cow position: | chr9:34287082-34286703 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 146, 75 |
| Conread position: | 9-358 |
| Cow position: | chr9:6880061-6879708 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 9-378 |
| Cow position: | chr9:34468302-34468669 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 16-316 |
| Cow position: | chr9:36827405-36827106 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 20-377 |
| Cow position: | chr9:9753117-9753482 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 21-315 |
| Cow position: | chr9:9416131-9416423 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 21-370 |
| Cow position: | chr9:6192183-6192543 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 21-370 |
| Cow position: | chr9:20321841-20322177 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 128, 86 |
| Conread position: | 21-391 |
| Cow position: | chr9:9443322-9443706 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 146, 271 |
| Conread position: | 24-385 |
| Cow position: | chr9:41283297-41282914 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 26-371 |
| Cow position: | chr9:64155586-64155936 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 82, 199 |
| Conread position: | 28-257 |
| Cow position: | chr9:24997248-24997489 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 28-261 |
| Cow position: | chr9:53602681-53602453 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 104, 91 |
| Conread position: | 28-351 |
| Cow position: | chr9:20091306-20090982 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 28-368 |
| Cow position: | chr9:5756735-5757071 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 159 |
| Conread position: | 28-370 |
| Cow position: | chr9:24887465-24887122 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 28-370 |
| Cow position: | chr9:62657060-62656719 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 28-376 |
| Cow position: | chr9:32732417-32732769 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 28-380 |
| Cow position: | chr9:33940875-33940512 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 121, 197 |
| Conread position: | 28-382 |
| Cow position: | chr9:18342990-18342635 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 28-382 |
| Cow position: | chr9:21459889-21460247 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 170 |
| Conread position: | 28-382 |
| Cow position: | chr9:22638368-22638006 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 127, 82 |
| Conread position: | 28-382 |
| Cow position: | chr9:33598249-33597890 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 28-382 |
| Cow position: | chr9:60110501-60110154 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 204, 70 |
| Conread position: | 28-394 |
| Cow position: | chr9:64091956-64091576 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 29-326 |
| Cow position: | chr9:43207112-43207413 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 30-382 |
| Cow position: | chr9:56453598-56453244 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 131 |
| Conread position: | 31-326 |
| Cow position: | chr9:63905339-63905646 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 201 |
| Conread position: | 31-334 |
| Cow position: | chr9:5161801-5162097 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 146, 77 |
| Conread position: | 31-373 |
| Cow position: | chr9:5836427-5836058 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 202 |
| Conread position: | 31-382 |
| Cow position: | chr9:10011065-10010719 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 32-370 |
| Cow position: | chr9:51620700-51620361 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 210 |
| Conread position: | 32-373 |
| Cow position: | chr9:17871843-17872197 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 33-378 |
| Cow position: | chr9:7363290-7362936 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 76, 192 |
| Conread position: | 34-373 |
| Cow position: | chr9:29684409-29684058 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 34-382 |
| Cow position: | chr9:28391768-28392122 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 34-382 |
| Cow position: | chr9:34374667-34375020 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 36-401 |
| Cow position: | chr9:18216840-18217213 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 72, 124 |
| Conread position: | 38-361 |
| Cow position: | chr9:51204983-51204652 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 124 |
| Conread position: | 47-382 |
| Cow position: | chr9:33119633-33119984 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 50-380 |
| Cow position: | chr9:50139527-50139191 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 99, 57 |
| Conread position: | 57-369 |
| Cow position: | chr9:35027934-35028248 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 59-271 |
| Cow position: | chr9:40604187-40603961 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 169 |
| Conread position: | 59-370 |
| Cow position: | chr9:6840248-6839909 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 173 |
| Conread position: | 59-380 |
| Cow position: | chr9:56011734-56011406 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 159 |
| Conread position: | 59-387 |
| Cow position: | chr9:45141368-45141701 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 61-387 |
| Cow position: | chr9:1729441-1729775 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 61 |
| Conread position: | 63-384 |
| Cow position: | chr9:4267747-4268080 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 64-341 |
| Cow position: | chr9:43623492-43623214 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 64-370 |
| Cow position: | chr9:4580188-4580488 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 64-382 |
| Cow position: | chr9:11313275-11313610 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 68-326 |
| Cow position: | chr9:6339030-6338754 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 167 |
| Conread position: | 69-257 |
| Cow position: | chr9:1532105-1532297 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 69-368 |
| Cow position: | chr9:30477557-30477856 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 70-372 |
| Cow position: | chr9:27279544-27279223 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 72-382 |
| Cow position: | chr9:1938350-1938028 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 74-373 |
| Cow position: | chr9:61303223-61302913 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 74-382 |
| Cow position: | chr9:42062338-42062002 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 78-358 |
| Cow position: | chr9:17676903-17677181 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 106 |
| Conread position: | 80-373 |
| Cow position: | chr9:43444011-43443717 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 87-358 |
| Cow position: | chr9:19493250-19493537 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 140 |
| Conread position: | 87-382 |
| Cow position: | chr9:37678096-37677798 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 89-382 |
| Cow position: | chr9:9815625-9815317 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 130 |
| Conread position: | 89-384 |
| Cow position: | chr9:35105587-35105888 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 90-358 |
| Cow position: | chr9:49417193-49416917 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 71, 255 |
| Conread position: | 92-370 |
| Cow position: | chr9:25805038-25804747 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 96-382 |
| Cow position: | chr9:11123287-11123579 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 97-383 |
| Cow position: | chr9:50543221-50543522 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 256 |
| Conread position: | 99-372 |
| Cow position: | chr9:10650104-10650385 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 100-386 |
| Cow position: | chr9:12225787-12226077 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 103-373 |
| Cow position: | chr9:25584013-25583743 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 131, 56 |
| Conread position: | 105-382 |
| Cow position: | chr9:41728446-41728163 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 108-373 |
| Cow position: | chr9:10819654-10819915 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 114-382 |
| Cow position: | chr9:8901042-8901322 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 115-369 |
| Cow position: | chr9:11168911-11168647 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 125-382 |
| Cow position: | chr9:26477387-26477119 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 144-370 |
| Cow position: | chr9:1867597-1867367 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 164-369 |
| Cow position: | chr9:44396784-44396579 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 164-396 |
| Cow position: | chr9:1877882-1878111 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 167-371 |
| Cow position: | chr9:34284070-34283869 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 167-382 |
| Cow position: | chr9:34410273-34410492 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 184-373 |
| Cow position: | chr9:23788541-23788352 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 185-394 |
| Cow position: | chr9:52598621-52598830 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 167, 29 |
| Conread position: | 186-372 |
| Cow position: | chr9:18827953-18828140 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 186-382 |
| Cow position: | chr9:9311962-9311762 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 194-373 |
| Cow position: | chr9:3343841-3343662 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 158, 7 |
| Conread position: | 196-394 |
| Cow position: | chr9:35832524-35832727 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 204-369 |
| Cow position: | chr9:39758600-39758435 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 150, 26 |
| Conread position: | 211-397 |
| Cow position: | chr9:52513369-52513559 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 212-373 |
| Cow position: | chr9:42478405-42478569 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 212-382 |
| Cow position: | chr9:7805886-7806057 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 215-384 |
| Cow position: | chr9:47214473-47214642 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 5, 16 |
Show alignments to all cow chromosomes.