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Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-353
               

               
Cow position:
               
chr10:42346929-42346575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 226
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr10:4502137-4502520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 220
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr10:17922863-17923206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr10:24126025-24125651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr10:14189301-14188941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr10:41637147-41637532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr10:31005543-31005160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 212
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr10:29175041-29175424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 35
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr10:54141389-54141796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 209
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr10:19503967-19503569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:32928265-32928678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr10:20446607-20447013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr10:30745905-30746319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 203
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr10:7737295-7737722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 21
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:63496412-63495988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 108
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr10:14639844-14639439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 30
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:43451422-43450987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 209
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr10:27361996-27362415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr10:31182362-31181951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
318, 73
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr10:56106541-56106993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 199
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr10:32174243-32174685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 192
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr10:1720038-1719558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 210
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr10:24972094-24971628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 198
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr10:60936453-60936923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr10:668364-668868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 270
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr10:53058175-53057681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr10:52152024-52152522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 207
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr10:32093296-32093807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 36
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr10:39110494-39110007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr10:46801502-46801011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr10:47493705-47493206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr10:20398709-20399211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr10:25342090-25342608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 146
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr10:55580751-55580263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr10:35823525-35823010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 212
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr10:54730530-54731047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 41
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr10:6172833-6173387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 372
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr10:53908205-53907700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr10:24022780-24022248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 216
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr10:29816091-29816640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 109
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr10:15293872-15294403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 78
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr10:61839100-61839629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr10:52782701-52782163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr10:15927104-15926557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 206
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr10:34580502-34579959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr10:53828401-53828940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:130732-131266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 36
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:4586857-4586316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 91
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:7278286-7277738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:8460025-8460572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 208
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:10802738-10802186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 208
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:19515025-19515568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 100
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:21338780-21339323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 209
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr10:28029936-28029404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr10:45769547-45770093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 191
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr10:65424403-65423858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr10:7367293-7366736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr10:12393092-12392557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 105
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr10:30523555-30523013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 210
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr10:41264611-41265141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr10:47773238-47773777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 230
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr10:29211463-29212000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 92
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr10:31028152-31027592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 376
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr10:21656930-21657472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 37
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr10:34655608-34655056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 51
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr10:40106621-40107153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 93
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr10:53336899-53336352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 37
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:6529704-6530239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 201
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:8093815-8093264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:10043585-10043054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 207
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:10134479-10135039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:10963475-10964041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:33665345-33665896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 145
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:38725170-38725708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 168
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:51862547-51862025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr10:59664455-59663918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 75
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr10:2612888-2613421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 97
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr10:9576545-9575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 139
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr10:13367845-13368407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 192
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr10:1979170-1978615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr10:20133027-20132472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr10:54469874-54469337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 64
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr10:11967348-11966790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 214
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:76899-77429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:6489387-6489930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 21
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:9675946-9675405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 31
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:22390100-22390655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 31
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:22471800-22472383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 238
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:26732145-26731591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:34660711-34660184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:37529778-37529207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 486
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:37819058-37818498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:42745405-42745976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:50609056-50609605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:52278226-52278783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 93
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:53083680-53084228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 73
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:53973363-53973900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 55
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr10:56834781-56835348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 209
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:25321-25884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 37
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:1488363-1488891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 31
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:2848857-2849408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 205
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:7328220-7328769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 390
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:13311231-13311792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 213
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:19372817-19372277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 88
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:22321037-22321582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:23913026-23912453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 460
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:24785590-24786166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 294
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:28671327-28670758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:30456347-30455771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 51
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:31374604-31374027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 206
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:32502975-32503486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 70
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:34661815-34661266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 11
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:35887899-35887337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:39386957-39387513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 188
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:40737508-40738052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 289
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:43487219-43487772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 54
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:48462838-48462284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 221
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr10:60960436-60960994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 191
               

               
Conread position:
               
1-555
               

               
Cow position:
               
chr10:10048193-10048732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 37
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr10:15867746-15868313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 93
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr10:9082816-9083364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 36
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr10:38943757-38944319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr10:50110397-50109841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 28
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr10:24744626-24745183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr10:3998416-3998973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 116
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr10:24308392-24307857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 206
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr10:30352338-30352917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr10:39774528-39774139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr10:23739246-23738846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
2-540
               

               
Cow position:
               
chr10:46195302-46195828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 92
               

               
Conread position:
               
2-548
               

               
Cow position:
               
chr10:63940289-63940824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
2-551
               

               
Cow position:
               
chr10:59588669-59588119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr10:38013864-38014425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 148
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr10:41396969-41397530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 356
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr10:16650439-16649871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 261
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr10:18041682-18042239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 409
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr10:32583416-32583971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 202
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr10:69935271-69934721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 198
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr10:65345954-65345412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
2-557
               

               
Cow position:
               
chr10:22617140-22616578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr10:58265050-58264691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr10:42230160-42230556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr10:20095277-20095816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 54
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr10:6985955-6986519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 157
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr10:10148134-10148707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 292
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr10:32416840-32417413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 273
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr10:56094740-56095133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 174
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr10:3984931-3985420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
4-547
               

               
Cow position:
               
chr10:62286057-62286609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 209
               

               
Conread position:
               
4-548
               

               
Cow position:
               
chr10:24755939-24756465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 217
               

               
Conread position:
               
4-551
               

               
Cow position:
               
chr10:39875624-39875097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
4-553
               

               
Cow position:
               
chr10:8403699-8404274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr10:48378125-48377714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 96
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr10:22528394-22527848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 202
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr10:35732022-35731474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 163
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr10:59164578-59164049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 247
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr10:31466259-31466801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 32
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr10:38941943-38942490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 32
               

               
Conread position:
               
6-554
               

               
Cow position:
               
chr10:24277257-24276666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 259
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr10:10046538-10046176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 87
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr10:28835747-28836139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
7-493
               

               
Cow position:
               
chr10:9798706-9798192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
7-553
               

               
Cow position:
               
chr10:54375932-54375378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 204
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr10:48741658-48741100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
7-556
               

               
Cow position:
               
chr10:67580807-67581346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 131
               

               
Conread position:
               
8-478
               

               
Cow position:
               
chr10:19104670-19104186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 7
               

               
Conread position:
               
8-553
               

               
Cow position:
               
chr10:29628443-29627908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
8-554
               

               
Cow position:
               
chr10:11221229-11221762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 198
               

               
Conread position:
               
8-558
               

               
Cow position:
               
chr10:26577059-26577613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 105
               

               
Conread position:
               
9-532
               

               
Cow position:
               
chr10:22520643-22520124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 67
               

               
Conread position:
               
9-537
               

               
Cow position:
               
chr10:26005495-26004960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 92
               

               
Conread position:
               
10-398
               

               
Cow position:
               
chr10:28569575-28569970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 91
               

               
Conread position:
               
10-554
               

               
Cow position:
               
chr10:41407809-41408334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 122
               

               
Conread position:
               
11-526
               

               
Cow position:
               
chr10:49568698-49569228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
11-538
               

               
Cow position:
               
chr10:32774629-32775143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 26
               

               
Conread position:
               
11-554
               

               
Cow position:
               
chr10:21461751-21462302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 204
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr10:26209733-26209188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 159
               

               
Conread position:
               
14-447
               

               
Cow position:
               
chr10:64300842-64300410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
17-485
               

               
Cow position:
               
chr10:50200222-50200704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 190
               

               
Conread position:
               
18-486
               

               
Cow position:
               
chr10:11217135-11217593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 30
               

               
Conread position:
               
18-562
               

               
Cow position:
               
chr10:10468498-10469045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 189
               

               
Conread position:
               
19-485
               

               
Cow position:
               
chr10:5113107-5113568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 185
               

               
Conread position:
               
19-554
               

               
Cow position:
               
chr10:28105529-28105020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 22
               

               
Conread position:
               
20-554
               

               
Cow position:
               
chr10:69544806-69544288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
22-502
               

               
Cow position:
               
chr10:37529092-37528596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 197
               

               
Conread position:
               
22-557
               

               
Cow position:
               
chr10:22567913-22567388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 100
               

               
Conread position:
               
25-548
               

               
Cow position:
               
chr10:53674351-53674879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 40
               

               
Conread position:
               
26-552
               

               
Cow position:
               
chr10:12314688-12315203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr10:46172440-46172084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 152
               

               
Conread position:
               
27-553
               

               
Cow position:
               
chr10:16740536-16740007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
30-550
               

               
Cow position:
               
chr10:25478647-25479154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
30-553
               

               
Cow position:
               
chr10:31362674-31362155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 71
               

               
Conread position:
               
31-517
               

               
Cow position:
               
chr10:6516660-6516159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 188
               

               
Conread position:
               
31-537
               

               
Cow position:
               
chr10:50359444-50359959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
32-553
               

               
Cow position:
               
chr10:35796783-35796278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
32-553
               

               
Cow position:
               
chr10:49146069-49146574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 29
               

               
Conread position:
               
38-548
               

               
Cow position:
               
chr10:8922820-8923333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 116
               

               
Conread position:
               
38-553
               

               
Cow position:
               
chr10:15818252-15817736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 57
               

               
Conread position:
               
38-553
               

               
Cow position:
               
chr10:24763014-24763541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
38-554
               

               
Cow position:
               
chr10:10721145-10720613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 467
               

               
Conread position:
               
38-554
               

               
Cow position:
               
chr10:38519100-38518568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 171
               

               
Conread position:
               
39-547
               

               
Cow position:
               
chr10:28395744-28395249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
41-421
               

               
Cow position:
               
chr10:2394924-2394544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
41-558
               

               
Cow position:
               
chr10:17073815-17073301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
42-554
               

               
Cow position:
               
chr10:11008966-11009469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 183
               

               
Conread position:
               
43-398
               

               
Cow position:
               
chr10:46584456-46584096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
43-486
               

               
Cow position:
               
chr10:35912213-35911753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
43-554
               

               
Cow position:
               
chr10:19894943-19895453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
45-483
               

               
Cow position:
               
chr10:19678418-19678864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 56
               

               
Conread position:
               
45-554
               

               
Cow position:
               
chr10:16598236-16598748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 76
               

               
Conread position:
               
46-554
               

               
Cow position:
               
chr10:65132500-65133003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
47-554
               

               
Cow position:
               
chr10:16645645-16645130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 54
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr10:41736855-41737349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 27
               

               
Conread position:
               
48-548
               

               
Cow position:
               
chr10:37913616-37913134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 118
               

               
Conread position:
               
50-535
               

               
Cow position:
               
chr10:4640463-4639971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 51
               

               
Conread position:
               
50-549
               

               
Cow position:
               
chr10:6504902-6505406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 326
               

               
Conread position:
               
50-553
               

               
Cow position:
               
chr10:52569146-52569650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 157
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr10:35753424-35752903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 170
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr10:35862679-35862168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr10:54948574-54948076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
54-549
               

               
Cow position:
               
chr10:6642421-6642944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
54-554
               

               
Cow position:
               
chr10:52590132-52589622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
54-557
               

               
Cow position:
               
chr10:69564176-69564663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 27
               

               
Conread position:
               
55-554
               

               
Cow position:
               
chr10:21081941-21082440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
64-537
               

               
Cow position:
               
chr10:56683633-56683162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 144
               

               
Conread position:
               
66-375
               

               
Cow position:
               
chr10:5264268-5264575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
69-447
               

               
Cow position:
               
chr10:57736593-57736215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
69-553
               

               
Cow position:
               
chr10:51943933-51944420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
70-554
               

               
Cow position:
               
chr10:54476677-54477161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
70-557
               

               
Cow position:
               
chr10:61588688-61588198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 141
               

               
Conread position:
               
76-537
               

               
Cow position:
               
chr10:55343242-55343710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
243, 131
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr10:52046444-52046927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 129
               

               
Conread position:
               
79-544
               

               
Cow position:
               
chr10:1427620-1428089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
79-553
               

               
Cow position:
               
chr10:24096799-24096314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 128
               

               
Conread position:
               
80-554
               

               
Cow position:
               
chr10:36001788-36002257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 6
               

               
Conread position:
               
82-423
               

               
Cow position:
               
chr10:11487393-11487062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
83-554
               

               
Cow position:
               
chr10:29920274-29919779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
84-544
               

               
Cow position:
               
chr10:12919741-12919307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 82
               

               
Conread position:
               
84-550
               

               
Cow position:
               
chr10:35903359-35902900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 127
               

               
Conread position:
               
84-554
               

               
Cow position:
               
chr10:51305911-51306400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 117
               

               
Conread position:
               
84-558
               

               
Cow position:
               
chr10:23886860-23886396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 120
               

               
Conread position:
               
85-373
               

               
Cow position:
               
chr10:4994976-4994683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
85-517
               

               
Cow position:
               
chr10:35905244-35904796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
86-491
               

               
Cow position:
               
chr10:5607235-5607644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 107
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr10:16092803-16093266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 127
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr10:24547846-24548306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 121
               

               
Conread position:
               
86-553
               

               
Cow position:
               
chr10:17175621-17176090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 8
               

               
Conread position:
               
86-553
               

               
Cow position:
               
chr10:66003473-66003932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
86-554
               

               
Cow position:
               
chr10:8413451-8412992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 15
               

               
Conread position:
               
87-514
               

               
Cow position:
               
chr10:59676036-59675581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
87-549
               

               
Cow position:
               
chr10:31401310-31400844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 120
               

               
Conread position:
               
87-554
               

               
Cow position:
               
chr10:59010553-59010076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 120
               

               
Conread position:
               
87-556
               

               
Cow position:
               
chr10:8077559-8077100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
89-475
               

               
Cow position:
               
chr10:14976212-14975812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 210
               

               
Conread position:
               
92-556
               

               
Cow position:
               
chr10:50534273-50533807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr10:14849828-14850276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
94-554
               

               
Cow position:
               
chr10:50016394-50015938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 114
               

               
Conread position:
               
95-508
               

               
Cow position:
               
chr10:67716584-67717000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 13
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr10:24870760-24871224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 118
               

               
Conread position:
               
96-513
               

               
Cow position:
               
chr10:34906308-34906732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 42
               

               
Conread position:
               
100-476
               

               
Cow position:
               
chr10:14098716-14098339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
101-480
               

               
Cow position:
               
chr10:24871472-24871878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
101-554
               

               
Cow position:
               
chr10:21448293-21447850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
101-554
               

               
Cow position:
               
chr10:56475071-56475528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 106
               

               
Conread position:
               
103-499
               

               
Cow position:
               
chr10:21036902-21037317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
103-554
               

               
Cow position:
               
chr10:59839687-59839228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 211
               

               
Conread position:
               
106-537
               

               
Cow position:
               
chr10:33891471-33891041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 47
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr10:6851882-6852321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 16
               

               
Conread position:
               
108-360
               

               
Cow position:
               
chr10:30568085-30567828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
150, 99
               

               
Conread position:
               
108-534
               

               
Cow position:
               
chr10:21428255-21428684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
185, 99
               

               
Conread position:
               
109-558
               

               
Cow position:
               
chr10:58718262-58718716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
110-485
               

               
Cow position:
               
chr10:47091938-47091571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 81
               

               
Conread position:
               
113-524
               

               
Cow position:
               
chr10:34897608-34898008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
114-554
               

               
Cow position:
               
chr10:17844362-17844826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
114-556
               

               
Cow position:
               
chr10:7304166-7304627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
117-554
               

               
Cow position:
               
chr10:59675634-59675195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 90
               

               
Conread position:
               
118-547
               

               
Cow position:
               
chr10:51696349-51696793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
121-553
               

               
Cow position:
               
chr10:57142597-57142157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
121-554
               

               
Cow position:
               
chr10:31791633-31791200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
121-554
               

               
Cow position:
               
chr10:39081013-39081455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
121-554
               

               
Cow position:
               
chr10:49846398-49846834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 84
               

               
Conread position:
               
122-508
               

               
Cow position:
               
chr10:58556823-58557203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
125-490
               

               
Cow position:
               
chr10:22786527-22786889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
126-553
               

               
Cow position:
               
chr10:36896029-36896463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
126-554
               

               
Cow position:
               
chr10:40421216-40420788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
128-528
               

               
Cow position:
               
chr10:69698613-69699007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
129-418
               

               
Cow position:
               
chr10:6345699-6345998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
129-540
               

               
Cow position:
               
chr10:804824-805236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 82
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr10:57785968-57786397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
133-537
               

               
Cow position:
               
chr10:56732662-56733076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
133-544
               

               
Cow position:
               
chr10:38259075-38259497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
188, 27
               

               
Conread position:
               
134-483
               

               
Cow position:
               
chr10:55733964-55733612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 73
               

               
Conread position:
               
135-517
               

               
Cow position:
               
chr10:35857437-35857039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
135-553
               

               
Cow position:
               
chr10:27717202-27716782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 72
               

               
Conread position:
               
135-554
               

               
Cow position:
               
chr10:4310827-4311232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 73
               

               
Conread position:
               
136-537
               

               
Cow position:
               
chr10:43683366-43683759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
137-418
               

               
Cow position:
               
chr10:16985877-16986159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
137-547
               

               
Cow position:
               
chr10:21422516-21422107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
138-530
               

               
Cow position:
               
chr10:29254530-29254128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
141-554
               

               
Cow position:
               
chr10:63627846-63628248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 183
               

               
Conread position:
               
143-549
               

               
Cow position:
               
chr10:15889134-15889528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 64
               

               
Conread position:
               
144-552
               

               
Cow position:
               
chr10:49045489-49045896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 67
               

               
Conread position:
               
145-548
               

               
Cow position:
               
chr10:28776015-28776404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
145-553
               

               
Cow position:
               
chr10:23056453-23056019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
146-537
               

               
Cow position:
               
chr10:65755311-65754913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
146-556
               

               
Cow position:
               
chr10:35900986-35901375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
149-554
               

               
Cow position:
               
chr10:6235773-6235388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 64
               

               
Conread position:
               
149-557
               

               
Cow position:
               
chr10:10985842-10985441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr10:48388645-48388278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
150-554
               

               
Cow position:
               
chr10:5543597-5543191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
151-548
               

               
Cow position:
               
chr10:11212749-11213165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 355
               

               
Conread position:
               
151-550
               

               
Cow position:
               
chr10:31854977-31855391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
151-554
               

               
Cow position:
               
chr10:1749226-1749644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
152-531
               

               
Cow position:
               
chr10:39268256-39268631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
153-350
               

               
Cow position:
               
chr10:6543233-6543430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
153-557
               

               
Cow position:
               
chr10:44782995-44783409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
154-554
               

               
Cow position:
               
chr10:24731970-24732363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
154-554
               

               
Cow position:
               
chr10:42312560-42312963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
156-537
               

               
Cow position:
               
chr10:39939772-39939390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
156-547
               

               
Cow position:
               
chr10:68829609-68829232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 52
               

               
Conread position:
               
161-552
               

               
Cow position:
               
chr10:42636893-42637290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 46
               

               
Conread position:
               
163-554
               

               
Cow position:
               
chr10:34430548-34430166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 35
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr10:29188695-29188297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
167-557
               

               
Cow position:
               
chr10:10752312-10751928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
170-554
               

               
Cow position:
               
chr10:37014310-37014693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
172-548
               

               
Cow position:
               
chr10:20896974-20897341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
176-536
               

               
Cow position:
               
chr10:6008781-6008413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
178-553
               

               
Cow position:
               
chr10:54848457-54848836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
180-537
               

               
Cow position:
               
chr10:1763154-1762802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr10:25509380-25509732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
181-395
               

               
Cow position:
               
chr10:10699828-10699615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr10:56828636-56828259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
186-546
               

               
Cow position:
               
chr10:62353153-62353510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
187-516
               

               
Cow position:
               
chr10:1087708-1088051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 24
               

               
Conread position:
               
187-553
               

               
Cow position:
               
chr10:15462185-15462550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
189-553
               

               
Cow position:
               
chr10:30914187-30914533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
189-554
               

               
Cow position:
               
chr10:53248319-53247944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
192-553
               

               
Cow position:
               
chr10:34607244-34607620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr10:5847809-5847586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr10:65803392-65803173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
193-553
               

               
Cow position:
               
chr10:37668466-37668097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr10:13586400-13586763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 175
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr10:27828015-27828381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
193-557
               

               
Cow position:
               
chr10:1423526-1423893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
194-548
               

               
Cow position:
               
chr10:35767383-35767036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
194-553
               

               
Cow position:
               
chr10:68183234-68182896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
233, 18
               

               
Conread position:
               
196-496
               

               
Cow position:
               
chr10:37444524-37444215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
201-554
               

               
Cow position:
               
chr10:28623285-28623616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
224, 23
               

               
Conread position:
               
207-553
               

               
Cow position:
               
chr10:20552893-20553243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr10:20568843-20569059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
210-485
               

               
Cow position:
               
chr10:20505248-20505538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
211-554
               

               
Cow position:
               
chr10:59844217-59843849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
212-398
               

               
Cow position:
               
chr10:26608178-26607985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr10:67443395-67443187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
212-422
               

               
Cow position:
               
chr10:35026190-35026402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
212-485
               

               
Cow position:
               
chr10:31266615-31266340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
212-508
               

               
Cow position:
               
chr10:33867668-33867385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
212-553
               

               
Cow position:
               
chr10:49038268-49038643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 311
               

               
Conread position:
               
212-553
               

               
Cow position:
               
chr10:66211587-66211233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr10:15872154-15871813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr10:46184483-46184799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr10:20811886-20812105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
213-485
               

               
Cow position:
               
chr10:17982898-17983176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
213-496
               

               
Cow position:
               
chr10:60032864-60032567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
213-551
               

               
Cow position:
               
chr10:9342027-9341680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
213-553
               

               
Cow position:
               
chr10:34175287-34174919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
10, 302
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr10:41941871-41941505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
213-556
               

               
Cow position:
               
chr10:45729211-45728890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
214-546
               

               
Cow position:
               
chr10:53179015-53179330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
214-554
               

               
Cow position:
               
chr10:24133107-24132764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr10:69998235-69998070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
216-425
               

               
Cow position:
               
chr10:8923647-8923865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chr10:34554376-34554095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr10:57457044-57457335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr10:55097968-55097697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr10:25149604-25149936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
216-538
               

               
Cow position:
               
chr10:37235839-37235509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
216-539
               

               
Cow position:
               
chr10:29069868-29070201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 281
               

               
Conread position:
               
216-548
               

               
Cow position:
               
chr10:54504314-54504658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 255
               

               
Conread position:
               
216-548
               

               
Cow position:
               
chr10:57461078-57461410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
216-549
               

               
Cow position:
               
chr10:58259803-58259470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 195
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr10:14909286-14909621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr10:25699378-25699706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr10:39227869-39228206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr10:49169344-49168975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr10:52296210-52296554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr10:53357611-53357955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
216-555
               

               
Cow position:
               
chr10:48259516-48259186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
216-557
               

               
Cow position:
               
chr10:1976608-1976255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 286
               

               
Conread position:
               
217-515
               

               
Cow position:
               
chr10:35975273-35975572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 152
               

               
Conread position:
               
217-537
               

               
Cow position:
               
chr10:47711084-47711412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 279
               

               
Conread position:
               
217-544
               

               
Cow position:
               
chr10:22048963-22049304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 292
               

               
Conread position:
               
217-547
               

               
Cow position:
               
chr10:41803180-41802847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-548
               

               
Cow position:
               
chr10:27749390-27749726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr10:64876232-64876578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr10:15115331-15115674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr10:21424971-21424620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 289
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr10:29165992-29166332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
218-416
               

               
Cow position:
               
chr10:69840042-69840248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
218-543
               

               
Cow position:
               
chr10:56080459-56080123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
219-553
               

               
Cow position:
               
chr10:45370774-45371114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
220-548
               

               
Cow position:
               
chr10:53935022-53934699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
221-375
               

               
Cow position:
               
chr10:69033813-69033656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
222-417
               

               
Cow position:
               
chr10:2185051-2185246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
94, 104
               

               
Conread position:
               
222-483
               

               
Cow position:
               
chr10:24755706-24755435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr10:19402655-19402932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
222-504
               

               
Cow position:
               
chr10:20372412-20372115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 282
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr10:61305001-61305293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
222-537
               

               
Cow position:
               
chr10:39398799-39398474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 188
               

               
Conread position:
               
222-537
               

               
Cow position:
               
chr10:43314413-43314738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 270
               

               
Conread position:
               
222-540
               

               
Cow position:
               
chr10:60389039-60388717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
222-547
               

               
Cow position:
               
chr10:13391334-13390995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 279
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr10:24744277-24744599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
222-552
               

               
Cow position:
               
chr10:14946986-14947312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr10:54936393-54936072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 212
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr10:23936203-23936536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr10:28039212-28038874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr10:48255504-48255165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 144
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr10:51288974-51289309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
222-560
               

               
Cow position:
               
chr10:43438589-43438939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 265
               

               
Conread position:
               
223-418
               

               
Cow position:
               
chr10:39646384-39646183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
223-486
               

               
Cow position:
               
chr10:39139928-39140176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
203, 26
               

               
Conread position:
               
223-536
               

               
Cow position:
               
chr10:37287457-37287134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
223-553
               

               
Cow position:
               
chr10:25935963-25936290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
223-553
               

               
Cow position:
               
chr10:44817503-44817832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 168
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr10:2974369-2974027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 182
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr10:15292992-15293325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr10:29279165-29279505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
223-557
               

               
Cow position:
               
chr10:24752878-24753208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
223-557
               

               
Cow position:
               
chr10:40906033-40906376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
224-375
               

               
Cow position:
               
chr10:39123980-39123821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
224-549
               

               
Cow position:
               
chr10:13765442-13765110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr10:721020-721360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 172
               

               
Conread position:
               
224-556
               

               
Cow position:
               
chr10:30460366-30460715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 133
               

               
Conread position:
               
224-558
               

               
Cow position:
               
chr10:5890049-5889699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 282
               

               
Conread position:
               
225-553
               

               
Cow position:
               
chr10:2517112-2517427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
226-398
               

               
Cow position:
               
chr10:58935466-58935292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
226-425
               

               
Cow position:
               
chr10:24153275-24153073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
100, 167
               

               
Conread position:
               
226-554
               

               
Cow position:
               
chr10:2449075-2449410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
226-554
               

               
Cow position:
               
chr10:15318609-15318945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 270
               

               
Conread position:
               
226-554
               

               
Cow position:
               
chr10:64286073-64285735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
226-556
               

               
Cow position:
               
chr10:37512525-37512177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 184
               

               
Conread position:
               
227-413
               

               
Cow position:
               
chr10:25475303-25475497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
227-548
               

               
Cow position:
               
chr10:35802645-35802307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 224
               

               
Conread position:
               
228-548
               

               
Cow position:
               
chr10:11080683-11081017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
86, 219
               

               
Conread position:
               
228-552
               

               
Cow position:
               
chr10:51313714-51314064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 313
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr10:47542816-47543135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
229-472
               

               
Cow position:
               
chr10:25045956-25045709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
196, 174
               

               
Conread position:
               
229-515
               

               
Cow position:
               
chr10:69567580-69567869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
229-554
               

               
Cow position:
               
chr10:63276117-63276452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 271
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr10:23376732-23376537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-527
               

               
Cow position:
               
chr10:2304645-2304349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
234-537
               

               
Cow position:
               
chr10:37042254-37042567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 210
               

               
Conread position:
               
234-553
               

               
Cow position:
               
chr10:17863315-17863644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
234-557
               

               
Cow position:
               
chr10:20997545-20997225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr10:35715978-35715807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
235-537
               

               
Cow position:
               
chr10:43288137-43287830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
235-562
               

               
Cow position:
               
chr10:59571629-59571969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 245
               

               
Conread position:
               
236-485
               

               
Cow position:
               
chr10:8169991-8170242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
236-551
               

               
Cow position:
               
chr10:59152130-59151808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
238-537
               

               
Cow position:
               
chr10:63166717-63166409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 259
               

               
Conread position:
               
238-554
               

               
Cow position:
               
chr10:63883708-63883998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
239-549
               

               
Cow position:
               
chr10:58690640-58690966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr10:49456340-49456033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 84
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr10:52113929-52113614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 120
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr10:57059545-57059222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
239-558
               

               
Cow position:
               
chr10:44771392-44771713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
240-442
               

               
Cow position:
               
chr10:69558664-69558871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
240-485
               

               
Cow position:
               
chr10:31812680-31812441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 75
               

               
Conread position:
               
240-551
               

               
Cow position:
               
chr10:28176656-28176332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 254
               

               
Conread position:
               
241-425
               

               
Cow position:
               
chr10:59141166-59141357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
241-547
               

               
Cow position:
               
chr10:65071049-65071364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 257
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr10:38370723-38370395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 257
               

               
Conread position:
               
243-443
               

               
Cow position:
               
chr10:16414844-16414643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
243-496
               

               
Cow position:
               
chr10:52029362-52029628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 258
               

               
Conread position:
               
243-504
               

               
Cow position:
               
chr10:17584289-17584023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
183, 82
               

               
Conread position:
               
243-544
               

               
Cow position:
               
chr10:67020367-67020672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
243-553
               

               
Cow position:
               
chr10:48257539-48257219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr10:24313149-24312829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 257
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr10:35791673-35791985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 154
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr10:48317216-48316888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
243-557
               

               
Cow position:
               
chr10:21413209-21412883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
244-480
               

               
Cow position:
               
chr10:9445272-9445031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
244-483
               

               
Cow position:
               
chr10:52175380-52175615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
244-552
               

               
Cow position:
               
chr10:61510933-61511238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
244-553
               

               
Cow position:
               
chr10:23576284-23576604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 257
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr10:24561246-24560928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
246-545
               

               
Cow position:
               
chr10:2462735-2462439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
246-554
               

               
Cow position:
               
chr10:22341308-22341636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
246-554
               

               
Cow position:
               
chr10:50183304-50182993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 255
               

               
Conread position:
               
246-558
               

               
Cow position:
               
chr10:36489762-36490083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
247-554
               

               
Cow position:
               
chr10:43508739-43509059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
248-553
               

               
Cow position:
               
chr10:29251907-29252222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 255
               

               
Conread position:
               
251-548
               

               
Cow position:
               
chr10:22396003-22396306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
254-554
               

               
Cow position:
               
chr10:31779517-31779209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
257-554
               

               
Cow position:
               
chr10:32030070-32029773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr10:29589085-29588780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 241
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr10:37709282-37708957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr10:64041838-64042144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
260-545
               

               
Cow position:
               
chr10:23500459-23500180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr10:18229961-18229719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
263-554
               

               
Cow position:
               
chr10:62219584-62219893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 243
               

               
Conread position:
               
265-544
               

               
Cow position:
               
chr10:13163685-13163399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 185
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr10:60722382-60722100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
266-505
               

               
Cow position:
               
chr10:25882189-25882426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr10:9586753-9586605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr10:37415549-37415848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
267-554
               

               
Cow position:
               
chr10:28152619-28152319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 234
               

               
Conread position:
               
267-556
               

               
Cow position:
               
chr10:40164165-40163872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
268-554
               

               
Cow position:
               
chr10:6038570-6038280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
269-558
               

               
Cow position:
               
chr10:45379242-45378941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 232
               

               
Conread position:
               
270-554
               

               
Cow position:
               
chr10:38512941-38513234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 253
               

               
Conread position:
               
271-554
               

               
Cow position:
               
chr10:6435827-6436119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 226
               

               
Conread position:
               
272-554
               

               
Cow position:
               
chr10:47412339-47412047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 230
               

               
Conread position:
               
274-544
               

               
Cow position:
               
chr10:43531026-43531316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
276-405
               

               
Cow position:
               
chr10:30106329-30106200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
277-425
               

               
Cow position:
               
chr10:15874665-15874510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr10:6665772-6665500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
277-554
               

               
Cow position:
               
chr10:46493229-46492935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 230
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr10:30787832-30787574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
279-554
               

               
Cow position:
               
chr10:33733093-33732813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 221
               

               
Conread position:
               
279-554
               

               
Cow position:
               
chr10:66194528-66194245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 181
               

               
Conread position:
               
282-509
               

               
Cow position:
               
chr10:31000822-31000572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 228
               

               
Conread position:
               
282-549
               

               
Cow position:
               
chr10:55929976-55930252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
285-554
               

               
Cow position:
               
chr10:17836731-17837011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
286-547
               

               
Cow position:
               
chr10:7816891-7817160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
293-553
               

               
Cow position:
               
chr10:10119994-10120252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
294-540
               

               
Cow position:
               
chr10:39304056-39303801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
294-548
               

               
Cow position:
               
chr10:24780985-24781242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
294-551
               

               
Cow position:
               
chr10:26145619-26145353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
297-504
               

               
Cow position:
               
chr10:48408594-48408381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
299-496
               

               
Cow position:
               
chr10:36285301-36285506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
299-543
               

               
Cow position:
               
chr10:35246138-35245898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr10:37173648-37173387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr10:1996860-1996609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr10:51942592-51942850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr10:51068862-51069130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
300-554
               

               
Cow position:
               
chr10:12486064-12486322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
302-553
               

               
Cow position:
               
chr10:13617841-13617595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
302-554
               

               
Cow position:
               
chr10:50135003-50134744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 140
               

               
Conread position:
               
303-554
               

               
Cow position:
               
chr10:4183996-4184255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 195
               

               
Conread position:
               
303-557
               

               
Cow position:
               
chr10:20391640-20391382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
304-554
               

               
Cow position:
               
chr10:50044845-50044584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 193
               

               
Conread position:
               
306-554
               

               
Cow position:
               
chr10:68926961-68927209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr10:11576572-11576827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 143
               

               
Conread position:
               
308-540
               

               
Cow position:
               
chr10:58612808-58612589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr10:41254762-41254520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
308-554
               

               
Cow position:
               
chr10:33117140-33116892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
309-549
               

               
Cow position:
               
chr10:37644885-37645114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
309-554
               

               
Cow position:
               
chr10:61982204-61982445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 46
               

               
Conread position:
               
311-548
               

               
Cow position:
               
chr10:533338-533585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 189
               

               
Conread position:
               
312-554
               

               
Cow position:
               
chr10:11463853-11463607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 176
               

               
Conread position:
               
316-517
               

               
Cow position:
               
chr10:24422341-24422133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
316-548
               

               
Cow position:
               
chr10:48087705-48087943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 187
               

               
Conread position:
               
317-491
               

               
Cow position:
               
chr10:1201753-1201936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
317-537
               

               
Cow position:
               
chr10:45678835-45679060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
317-544
               

               
Cow position:
               
chr10:35779083-35778851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
109, 177
               

               
Conread position:
               
317-545
               

               
Cow position:
               
chr10:747283-747520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 181
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr10:22434101-22433857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr10:35653482-35653723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr10:52695910-52695673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 176
               

               
Conread position:
               
317-551
               

               
Cow position:
               
chr10:1070321-1070089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr10:8411818-8412048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr10:8812124-8811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr10:48513265-48513023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
110, 126
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:19549670-19549428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:24375371-24375603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 153
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:32834636-32834880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:42893146-42892911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:47690212-47690447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr10:66593286-66593041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 179
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr10:45657963-45658206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr10:44730660-44730416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr10:45476396-45476160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 157
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr10:55801114-55801365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 177
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr10:45871335-45871578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
318-514
               

               
Cow position:
               
chr10:4484486-4484677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
320-547
               

               
Cow position:
               
chr10:28178987-28178771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
320-558
               

               
Cow position:
               
chr10:45965322-45965563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
43, 172
               

               
Conread position:
               
321-551
               

               
Cow position:
               
chr10:5264643-5264867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
322-485
               

               
Cow position:
               
chr10:48499926-48500089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
322-535
               

               
Cow position:
               
chr10:69587856-69587638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
322-553
               

               
Cow position:
               
chr10:37295839-37295614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
326-510
               

               
Cow position:
               
chr10:35856522-35856341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
326-552
               

               
Cow position:
               
chr10:60237266-60237038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
326-554
               

               
Cow position:
               
chr10:4164095-4164329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
100, 169
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr10:47724777-47725006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr10:44764673-44764436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr10:6532319-6532099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
332-552
               

               
Cow position:
               
chr10:2537928-2538148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
332-553
               

               
Cow position:
               
chr10:38376818-38376600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
332-554
               

               
Cow position:
               
chr10:4109423-4109648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
332-557
               

               
Cow position:
               
chr10:38240917-38241141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
334-554
               

               
Cow position:
               
chr10:39587024-39586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr10:10219482-10219697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr10:30613675-30613885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
335-554
               

               
Cow position:
               
chr10:16683977-16683747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
336-548
               

               
Cow position:
               
chr10:33240840-33240626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 155
               

               
Conread position:
               
336-554
               

               
Cow position:
               
chr10:53364863-53365087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 84
               

               
Conread position:
               
336-562
               

               
Cow position:
               
chr10:2202287-2202051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
338-485
               

               
Cow position:
               
chr10:48367200-48367049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
339-548
               

               
Cow position:
               
chr10:47651149-47651352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
339-553
               

               
Cow position:
               
chr10:6543563-6543784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
339-556
               

               
Cow position:
               
chr10:37884953-37884736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr10:16986171-16986391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
342-553
               

               
Cow position:
               
chr10:6384379-6384589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 146
               

               
Conread position:
               
348-503
               

               
Cow position:
               
chr10:15750644-15750803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
348-557
               

               
Cow position:
               
chr10:38430715-38430502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr10:21923670-21923462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr10:42123744-42123530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
359-502
               

               
Cow position:
               
chr10:24866174-24866033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
359-542
               

               
Cow position:
               
chr10:58451511-58451323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
360-554
               

               
Cow position:
               
chr10:15309535-15309343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
363-523
               

               
Cow position:
               
chr10:331242-331409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
363-551
               

               
Cow position:
               
chr10:6663891-6664090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
64, 136
               

               
Conread position:
               
363-553
               

               
Cow position:
               
chr10:53075986-53076172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr10:13315806-13315998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr10:36531867-36531666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
363-558
               

               
Cow position:
               
chr10:45295275-45295079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
363-558
               

               
Cow position:
               
chr10:55063758-55063954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
363-562
               

               
Cow position:
               
chr10:6768844-6768646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
364-548
               

               
Cow position:
               
chr10:45624284-45624103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 130
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr10:52069618-52069425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
365-553
               

               
Cow position:
               
chr10:7383743-7383555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
365-554
               

               
Cow position:
               
chr10:9579099-9578899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
366-557
               

               
Cow position:
               
chr10:22480168-22480348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
366-558
               

               
Cow position:
               
chr10:25913927-25913734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
366-558
               

               
Cow position:
               
chr10:52120607-52120800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr10:60446601-60446791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
367-559
               

               
Cow position:
               
chr10:12651706-12651896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
368-554
               

               
Cow position:
               
chr10:52881750-52881559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
369-540
               

               
Cow position:
               
chr10:31005148-31004971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
369-554
               

               
Cow position:
               
chr10:33084565-33084381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
370-553
               

               
Cow position:
               
chr10:49942344-49942527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
371-557
               

               
Cow position:
               
chr10:36401206-36401023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
373-554
               

               
Cow position:
               
chr10:12100674-12100484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 124
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr10:36107542-36107358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
375-556
               

               
Cow position:
               
chr10:58935292-58935108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
376-554
               

               
Cow position:
               
chr10:10026233-10026409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
379-553
               

               
Cow position:
               
chr10:41561951-41562119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
380-553
               

               
Cow position:
               
chr10:33881901-33881725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
382-554
               

               
Cow position:
               
chr10:16944361-16944532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
385-553
               

               
Cow position:
               
chr10:61510054-61509885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
385-554
               

               
Cow position:
               
chr10:19098724-19098900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
385-554
               

               
Cow position:
               
chr10:29328500-29328334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr10:19539932-19539763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
388-535
               

               
Cow position:
               
chr10:48178243-48178397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
390-554
               

               
Cow position:
               
chr10:56180456-56180623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
390-556
               

               
Cow position:
               
chr10:42230681-42230854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
391-548
               

               
Cow position:
               
chr10:48407030-48407191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
392-548
               

               
Cow position:
               
chr10:55396084-55395923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
392-554
               

               
Cow position:
               
chr10:46262081-46262245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
393-554
               

               
Cow position:
               
chr10:22360209-22360047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
399-553
               

               
Cow position:
               
chr10:17926178-17926019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
399-554
               

               
Cow position:
               
chr10:15424954-15425109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
399-554
               

               
Cow position:
               
chr10:17568195-17568042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
404-554
               

               
Cow position:
               
chr10:10137773-10137924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
408-558
               

               
Cow position:
               
chr10:47182656-47182505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr10:55382227-55382373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
427-546
               

               
Cow position:
               
chr10:48282621-48282500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
427-551
               

               
Cow position:
               
chr10:17553118-17553239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
427-560
               

               
Cow position:
               
chr10:24903047-24902919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
428-554
               

               
Cow position:
               
chr10:29349546-29349673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
429-554
               

               
Cow position:
               
chr10:23128047-23127927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
429-554
               

               
Cow position:
               
chr10:37768241-37768364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
432-554
               

               
Cow position:
               
chr10:32080213-32080331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
434-554
               

               
Cow position:
               
chr10:705054-704936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
437-557
               

               
Cow position:
               
chr10:10152954-10153072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
438-551
               

               
Cow position:
               
chr10:35893960-35893849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
438-554
               

               
Cow position:
               
chr10:34700576-34700690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
445-554
               

               
Cow position:
               
chr10:31400126-31400233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
447-554
               

               
Cow position:
               
chr10:48898620-48898725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               
Show alignments to all cow chromosomes.