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Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-357
               

               
Cow position:
               
chr13:19396811-19396452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr13:21988647-21989006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 36
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr13:33500142-33499767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 80
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr13:6650801-6651205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:46459114-46458661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 399
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr13:19426239-19426661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 206
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr13:20538039-20537634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 53
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr13:27027319-27027740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 114
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr13:60646053-60645627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 34
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr13:60690258-60690692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 208
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr13:11290352-11290808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr13:18533975-18534426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 210
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr13:37945761-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 206
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr13:3701891-3701412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr13:34052138-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr13:20863563-20864046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr13:1011791-1011299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 209
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr13:24059872-24060368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 264
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr13:5751962-5752472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 174
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr13:19178740-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 215
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr13:37978728-37979211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 218
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr13:60447635-60448165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 43
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr13:41254085-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 137
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr13:51527988-51528519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 151
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr13:61976508-61977037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr13:15280820-15281362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr13:33351922-33352427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 31
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr13:34038025-34037499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 210
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr13:38283524-38284058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:18329593-18329045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:30306946-30307486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:32793810-32793261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:43151566-43151019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:46324331-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr13:34375714-34375176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 212
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr13:53535838-53536392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr13:9301916-9302463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:30468586-30468040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 201
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr13:889715-890256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr13:12618633-12619205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr13:46182231-46181703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 36
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr13:12978013-12977485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 36
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr13:13261472-13260913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 36
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr13:25062877-25062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 228
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr13:34282142-34281589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 209
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr13:971437-971989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 208
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr13:20665932-20666478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 91
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr13:21107596-21107053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 278
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr13:34728387-34728933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 58
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr13:41807212-41806680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr13:26382762-26383330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 216
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr13:4553254-4552722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 133
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr13:25927270-25926694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr13:60508664-60509216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 178
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:17800532-17799983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 64
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:17820804-17821367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 100
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:20605663-20606214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 34
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:20683667-20684225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 91
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:36352530-36353054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 114
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:40943702-40943147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 125
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:44626824-44626272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:45353489-45352934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 154
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr13:52057988-52057460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 44
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:185969-185432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 218
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:311891-311340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 206
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:2414483-2413932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 169
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:6974629-6974063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:7662974-7663520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 75
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:20563450-20562895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 120
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:22085300-22085844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 207
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:31814318-31813778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr13:32550273-32550835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 210
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr13:1155250-1155803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 37
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr13:15872906-15872340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 100
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr13:20175197-20174640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 36
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr13:49805426-49804876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 108
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr13:52922559-52922135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 89
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr13:37516682-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 90
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr13:20440143-20440635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 216
               

               
Conread position:
               
2-534
               

               
Cow position:
               
chr13:20561555-20561031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 35
               

               
Conread position:
               
2-537
               

               
Cow position:
               
chr13:55371703-55372246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 205
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr13:30651634-30651091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 206
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr13:34262925-34263467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 59
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr13:16015273-16014713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 328
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr13:21235232-21235769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr13:25531331-25531888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr13:43762621-43762070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 29
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr13:10859481-10859881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr13:47313355-47312861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr13:609385-609922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 207
               

               
Conread position:
               
3-547
               

               
Cow position:
               
chr13:34941200-34941741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 204
               

               
Conread position:
               
4-553
               

               
Cow position:
               
chr13:10928536-10929085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 198
               

               
Conread position:
               
4-554
               

               
Cow position:
               
chr13:23856694-23856113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 295
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr13:11795166-11794789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 206
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr13:52585569-52585987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr13:21402335-21402791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 213
               

               
Conread position:
               
5-476
               

               
Cow position:
               
chr13:25248684-25249180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
5-478
               

               
Cow position:
               
chr13:21231048-21231527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 205
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr13:6616293-6616852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:15869578-15869016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 215
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:25695316-25695865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 82
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:28683807-28683264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 78
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:37483809-37484377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:40722229-40722805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr13:51941189-51940636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 214
               

               
Conread position:
               
5-558
               

               
Cow position:
               
chr13:15446497-15445936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 150
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr13:25453624-25453266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 201
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr13:1458923-1458509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
353, 31
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr13:6945841-6945361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 218
               

               
Conread position:
               
7-557
               

               
Cow position:
               
chr13:16248109-16247547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 191
               

               
Conread position:
               
8-545
               

               
Cow position:
               
chr13:58044080-58043539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 199
               

               
Conread position:
               
8-557
               

               
Cow position:
               
chr13:9907187-9906630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 86
               

               
Conread position:
               
8-557
               

               
Cow position:
               
chr13:20377891-20378421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 30
               

               
Conread position:
               
11-551
               

               
Cow position:
               
chr13:36770973-36771516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 196
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr13:24754338-24753789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr13:6153313-6153882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 213
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr13:11834036-11834576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr13:32166860-32167409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 29
               

               
Conread position:
               
17-551
               

               
Cow position:
               
chr13:47007295-47007814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
18-355
               

               
Cow position:
               
chr13:33049265-33048928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
20-360
               

               
Cow position:
               
chr13:62018649-62018995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
22-553
               

               
Cow position:
               
chr13:8202450-8202963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
23-554
               

               
Cow position:
               
chr13:16344138-16343596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
24-549
               

               
Cow position:
               
chr13:42114446-42113926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 100
               

               
Conread position:
               
25-554
               

               
Cow position:
               
chr13:25434695-25435221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 40
               

               
Conread position:
               
26-553
               

               
Cow position:
               
chr13:33256951-33256404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr13:20879402-20879922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 181
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr13:34261688-34261133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr13:60429648-60430176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 100
               

               
Conread position:
               
31-554
               

               
Cow position:
               
chr13:15162244-15162730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 62
               

               
Conread position:
               
32-553
               

               
Cow position:
               
chr13:35525784-35526292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr13:32151986-32151643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
36-554
               

               
Cow position:
               
chr13:59687440-59687976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
38-360
               

               
Cow position:
               
chr13:17270398-17270056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
38-486
               

               
Cow position:
               
chr13:61170303-61170750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 69
               

               
Conread position:
               
39-447
               

               
Cow position:
               
chr13:14544532-14544129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
40-426
               

               
Cow position:
               
chr13:3003864-3003475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 166
               

               
Conread position:
               
40-493
               

               
Cow position:
               
chr13:18215850-18215406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
40-553
               

               
Cow position:
               
chr13:19882619-19883133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 160
               

               
Conread position:
               
42-553
               

               
Cow position:
               
chr13:46516477-46515964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 16
               

               
Conread position:
               
43-352
               

               
Cow position:
               
chr13:22570963-22570641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
105, 172
               

               
Conread position:
               
43-553
               

               
Cow position:
               
chr13:33876080-33875578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
43-557
               

               
Cow position:
               
chr13:12546489-12547009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
44-537
               

               
Cow position:
               
chr13:23682334-23682817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 163
               

               
Conread position:
               
46-410
               

               
Cow position:
               
chr13:37947601-37947953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 161
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr13:15591726-15592047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 33
               

               
Conread position:
               
50-525
               

               
Cow position:
               
chr13:21155084-21155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 11
               

               
Conread position:
               
50-545
               

               
Cow position:
               
chr13:1232059-1231551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr13:8609151-8609645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 47
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr13:60974475-60973981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 100
               

               
Conread position:
               
51-549
               

               
Cow position:
               
chr13:12044932-12045431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 156
               

               
Conread position:
               
51-553
               

               
Cow position:
               
chr13:56154756-56155248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
52-549
               

               
Cow position:
               
chr13:20649580-20650080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 85
               

               
Conread position:
               
54-503
               

               
Cow position:
               
chr13:7010874-7010419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 31
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr13:36264367-36264075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 149
               

               
Conread position:
               
58-549
               

               
Cow position:
               
chr13:46736618-46736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr13:6606624-6606988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 143
               

               
Conread position:
               
67-537
               

               
Cow position:
               
chr13:9049183-9049650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
76-548
               

               
Cow position:
               
chr13:6086517-6086985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 131
               

               
Conread position:
               
76-553
               

               
Cow position:
               
chr13:42860189-42860667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 132
               

               
Conread position:
               
76-554
               

               
Cow position:
               
chr13:12670073-12670549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 103
               

               
Conread position:
               
77-545
               

               
Cow position:
               
chr13:52284292-52283823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
80-535
               

               
Cow position:
               
chr13:17855752-17855293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 105
               

               
Conread position:
               
81-523
               

               
Cow position:
               
chr13:16270313-16269871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 6
               

               
Conread position:
               
83-556
               

               
Cow position:
               
chr13:18835563-18835104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 124
               

               
Conread position:
               
84-549
               

               
Cow position:
               
chr13:20820462-20820923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 141
               

               
Conread position:
               
84-558
               

               
Cow position:
               
chr13:58320646-58320184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
243, 118
               

               
Conread position:
               
85-556
               

               
Cow position:
               
chr13:12875609-12876072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
86-476
               

               
Cow position:
               
chr13:562763-563165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 127
               

               
Conread position:
               
86-539
               

               
Cow position:
               
chr13:6835436-6835878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
86-539
               

               
Cow position:
               
chr13:60330148-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 171
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr13:40652305-40651837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 14
               

               
Conread position:
               
87-557
               

               
Cow position:
               
chr13:30799095-30798621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 126
               

               
Conread position:
               
88-547
               

               
Cow position:
               
chr13:12448616-12449079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 119
               

               
Conread position:
               
88-553
               

               
Cow position:
               
chr13:38330004-38329519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 83
               

               
Conread position:
               
88-554
               

               
Cow position:
               
chr13:9974694-9975174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 144
               

               
Conread position:
               
89-548
               

               
Cow position:
               
chr13:13321147-13320705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 32
               

               
Conread position:
               
89-554
               

               
Cow position:
               
chr13:10988703-10989168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 121
               

               
Conread position:
               
91-554
               

               
Cow position:
               
chr13:17158495-17158976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 116
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr13:152308-151866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
94-557
               

               
Cow position:
               
chr13:53566950-53566500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 74
               

               
Conread position:
               
99-375
               

               
Cow position:
               
chr13:41360110-41359835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
220, 71
               

               
Conread position:
               
100-551
               

               
Cow position:
               
chr13:21276216-21275764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr13:32949646-32950089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 98
               

               
Conread position:
               
101-553
               

               
Cow position:
               
chr13:45022826-45023306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 159
               

               
Conread position:
               
101-554
               

               
Cow position:
               
chr13:1042597-1043067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 106
               

               
Conread position:
               
102-425
               

               
Cow position:
               
chr13:43629403-43629742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
102-537
               

               
Cow position:
               
chr13:28140183-28140624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
217, 9
               

               
Conread position:
               
102-546
               

               
Cow position:
               
chr13:11820935-11820508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 105
               

               
Conread position:
               
102-554
               

               
Cow position:
               
chr13:32717514-32717962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
111-554
               

               
Cow position:
               
chr13:32017174-32017610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 96
               

               
Conread position:
               
113-425
               

               
Cow position:
               
chr13:14816001-14815684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
206, 100
               

               
Conread position:
               
114-523
               

               
Cow position:
               
chr13:39952068-39952483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
202, 91
               

               
Conread position:
               
114-548
               

               
Cow position:
               
chr13:17613692-17613248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 96
               

               
Conread position:
               
114-548
               

               
Cow position:
               
chr13:21175977-21176412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
114-549
               

               
Cow position:
               
chr13:15288586-15289014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 62
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr13:15958963-15958519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 52
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr13:16292887-16292444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 27
               

               
Conread position:
               
114-556
               

               
Cow position:
               
chr13:23269867-23270305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 96
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr13:32870306-32870092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
218, 6
               

               
Conread position:
               
115-554
               

               
Cow position:
               
chr13:8362401-8362841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 91
               

               
Conread position:
               
115-554
               

               
Cow position:
               
chr13:8838653-8839089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
116-537
               

               
Cow position:
               
chr13:3649147-3648723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
117-486
               

               
Cow position:
               
chr13:13266144-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 90
               

               
Conread position:
               
117-554
               

               
Cow position:
               
chr13:2774461-2774029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 91
               

               
Conread position:
               
118-360
               

               
Cow position:
               
chr13:8136227-8136475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
201, 76
               

               
Conread position:
               
118-553
               

               
Cow position:
               
chr13:46525100-46525523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
121-360
               

               
Cow position:
               
chr13:1638547-1638778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
122-548
               

               
Cow position:
               
chr13:6189293-6189692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
123-497
               

               
Cow position:
               
chr13:33517571-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 252
               

               
Conread position:
               
123-553
               

               
Cow position:
               
chr13:34508213-34507789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 84
               

               
Conread position:
               
123-554
               

               
Cow position:
               
chr13:43138892-43139312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 84
               

               
Conread position:
               
125-554
               

               
Cow position:
               
chr13:26479881-26480302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
126-554
               

               
Cow position:
               
chr13:4208484-4208911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
193, 71
               

               
Conread position:
               
126-554
               

               
Cow position:
               
chr13:11260584-11260177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
126-554
               

               
Cow position:
               
chr13:37981418-37981842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 98
               

               
Conread position:
               
127-425
               

               
Cow position:
               
chr13:37980318-37980603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
129-544
               

               
Cow position:
               
chr13:19138768-19138352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 81
               

               
Conread position:
               
129-552
               

               
Cow position:
               
chr13:17622615-17622192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 82
               

               
Conread position:
               
130-421
               

               
Cow position:
               
chr13:6498923-6498638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
130-421
               

               
Cow position:
               
chr13:38485148-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr13:49283015-49283276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
134-532
               

               
Cow position:
               
chr13:21039277-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
135-402
               

               
Cow position:
               
chr13:21524750-21524487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 72
               

               
Conread position:
               
135-447
               

               
Cow position:
               
chr13:15172084-15172396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 75
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr13:5091337-5091701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 44
               

               
Conread position:
               
135-507
               

               
Cow position:
               
chr13:16833764-16834129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
136-549
               

               
Cow position:
               
chr13:40491567-40491122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
138-412
               

               
Cow position:
               
chr13:57323777-57323502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
141-548
               

               
Cow position:
               
chr13:27524943-27525352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
142-540
               

               
Cow position:
               
chr13:17291816-17292215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
143-418
               

               
Cow position:
               
chr13:9125990-9125709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
176, 64
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr13:20683263-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
143-553
               

               
Cow position:
               
chr13:13089344-13088932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
143-556
               

               
Cow position:
               
chr13:44202306-44201907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
145-554
               

               
Cow position:
               
chr13:56148855-56148423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
145-554
               

               
Cow position:
               
chr13:56160112-56160544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
146-554
               

               
Cow position:
               
chr13:20270907-20271323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
146-554
               

               
Cow position:
               
chr13:37382125-37381703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
147-465
               

               
Cow position:
               
chr13:55843797-55843472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
147-553
               

               
Cow position:
               
chr13:34035681-34035270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 60
               

               
Conread position:
               
148-485
               

               
Cow position:
               
chr13:25261480-25261843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 210
               

               
Conread position:
               
150-537
               

               
Cow position:
               
chr13:13306412-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 20
               

               
Conread position:
               
150-553
               

               
Cow position:
               
chr13:20813973-20814367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 58
               

               
Conread position:
               
150-553
               

               
Cow position:
               
chr13:20816620-20816226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 58
               

               
Conread position:
               
152-552
               

               
Cow position:
               
chr13:15234214-15233830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
153-551
               

               
Cow position:
               
chr13:17977641-17977259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
154-553
               

               
Cow position:
               
chr13:14927543-14927165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
156-439
               

               
Cow position:
               
chr13:15740367-15740081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
156-557
               

               
Cow position:
               
chr13:32283423-32283027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
160-556
               

               
Cow position:
               
chr13:58525212-58524831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
227, 47
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr13:25817811-25817430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 45
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr13:18244159-18243764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr13:25537939-25537525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
165-554
               

               
Cow position:
               
chr13:51821593-51821971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
167-552
               

               
Cow position:
               
chr13:38872682-38873040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 26
               

               
Conread position:
               
171-392
               

               
Cow position:
               
chr13:8265763-8265537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr13:21194233-21194536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr13:37497474-37497706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
206, 23
               

               
Conread position:
               
178-553
               

               
Cow position:
               
chr13:60967046-60966672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
180-435
               

               
Cow position:
               
chr13:46298349-46298624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
180-557
               

               
Cow position:
               
chr13:12574914-12574533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr13:61047485-61047117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
181-554
               

               
Cow position:
               
chr13:9265533-9265925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
186-421
               

               
Cow position:
               
chr13:24539766-24539530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
186-553
               

               
Cow position:
               
chr13:6079145-6079509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
186-554
               

               
Cow position:
               
chr13:45726153-45725794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
193-357
               

               
Cow position:
               
chr13:14576933-14576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr13:55295359-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr13:38012635-38012234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
193-556
               

               
Cow position:
               
chr13:38277870-38278248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
193-557
               

               
Cow position:
               
chr13:26261524-26261889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
194-540
               

               
Cow position:
               
chr13:54702456-54702102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
194-554
               

               
Cow position:
               
chr13:18166996-18166634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
194-557
               

               
Cow position:
               
chr13:15041206-15041574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
197-554
               

               
Cow position:
               
chr13:37069613-37069247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
203-546
               

               
Cow position:
               
chr13:43480322-43479970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 296
               

               
Conread position:
               
203-554
               

               
Cow position:
               
chr13:15884756-15885120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
204-539
               

               
Cow position:
               
chr13:15349011-15349323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
205-554
               

               
Cow position:
               
chr13:43194434-43194071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 201
               

               
Conread position:
               
206-553
               

               
Cow position:
               
chr13:13501363-13501715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
208-454
               

               
Cow position:
               
chr13:24776546-24776284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
210-477
               

               
Cow position:
               
chr13:20530888-20531172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
212-425
               

               
Cow position:
               
chr13:54418483-54418264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
212-537
               

               
Cow position:
               
chr13:54381684-54382001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
212-547
               

               
Cow position:
               
chr13:11460876-11460542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
212-548
               

               
Cow position:
               
chr13:23479280-23478938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
212-549
               

               
Cow position:
               
chr13:21287839-21288178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr13:20784839-20784492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr13:52894393-52894049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
212-558
               

               
Cow position:
               
chr13:5713545-5713213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
213-392
               

               
Cow position:
               
chr13:27017139-27017315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr13:61166205-61166534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
213-548
               

               
Cow position:
               
chr13:53574209-53573877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr13:12614512-12614155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 293
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr13:17970783-17971127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr13:19393537-19393194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr13:52879660-52879304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
214-510
               

               
Cow position:
               
chr13:37521131-37521430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
214-548
               

               
Cow position:
               
chr13:17021471-17021817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
214-551
               

               
Cow position:
               
chr13:8201234-8201578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
214-553
               

               
Cow position:
               
chr13:60599693-60600028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr13:48251745-48252024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr13:30693950-30693660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr13:43594867-43595189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr13:46311787-46312098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
216-548
               

               
Cow position:
               
chr13:14063279-14063613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr13:4664612-4664952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr13:17439517-17439865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 285
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr13:9246963-9246634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 162
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr13:24280497-24280159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr13:24715484-24715143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr13:34995077-34995427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 169
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr13:52285064-52284717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
217-351
               

               
Cow position:
               
chr13:22732132-22732269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-404
               

               
Cow position:
               
chr13:16155472-16155666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-508
               

               
Cow position:
               
chr13:1780081-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 285
               

               
Conread position:
               
217-528
               

               
Cow position:
               
chr13:24376737-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
217-548
               

               
Cow position:
               
chr13:23960560-23960894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
217-549
               

               
Cow position:
               
chr13:4866734-4867066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr13:35659999-35659663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
218-551
               

               
Cow position:
               
chr13:26847578-26847923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 191
               

               
Conread position:
               
218-554
               

               
Cow position:
               
chr13:3315426-3315773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
218-554
               

               
Cow position:
               
chr13:8524376-8524716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
219-557
               

               
Cow position:
               
chr13:54345021-54344679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
220-557
               

               
Cow position:
               
chr13:15624856-15624526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
140, 105
               

               
Conread position:
               
221-375
               

               
Cow position:
               
chr13:29122599-29122751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
221-521
               

               
Cow position:
               
chr13:5658488-5658791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
221-554
               

               
Cow position:
               
chr13:7076499-7076159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
221-554
               

               
Cow position:
               
chr13:15974853-15974520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 249
               

               
Conread position:
               
222-360
               

               
Cow position:
               
chr13:29671199-29671339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
222-458
               

               
Cow position:
               
chr13:21904901-21904659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
222-476
               

               
Cow position:
               
chr13:34299402-34299644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr13:22115945-22115628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
222-545
               

               
Cow position:
               
chr13:12926032-12925690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr13:21241850-21242176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 168
               

               
Conread position:
               
222-551
               

               
Cow position:
               
chr13:15622049-15621716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr13:17114138-17114476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr13:20705961-20706302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr13:1959251-1958910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr13:5278946-5279300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr13:20180639-20180316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr13:22886750-22887087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 238
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr13:24155782-24155416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
223-509
               

               
Cow position:
               
chr13:9107816-9107535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
223-522
               

               
Cow position:
               
chr13:2462991-2463301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
104, 6
               

               
Conread position:
               
223-553
               

               
Cow position:
               
chr13:37985510-37985841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr13:42200859-42200521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
224-404
               

               
Cow position:
               
chr13:54331259-54331071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
224-420
               

               
Cow position:
               
chr13:55406425-55406615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr13:2339669-2339429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
224-472
               

               
Cow position:
               
chr13:43839306-43839561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
224-520
               

               
Cow position:
               
chr13:16024828-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
224-525
               

               
Cow position:
               
chr13:9587344-9587658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
224-537
               

               
Cow position:
               
chr13:11821380-11821072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
224-553
               

               
Cow position:
               
chr13:55673965-55674305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 274
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr13:13176889-13176552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr13:20466055-20466383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr13:23166857-23167199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
224-562
               

               
Cow position:
               
chr13:44323143-44322786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
225-553
               

               
Cow position:
               
chr13:48037859-48037526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 270
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chr13:41154808-41155066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
226-553
               

               
Cow position:
               
chr13:24586285-24585950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
227-546
               

               
Cow position:
               
chr13:12283072-12282735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr13:43184635-43184979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr13:43919018-43919359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
227-557
               

               
Cow position:
               
chr13:25547356-25547683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 99
               

               
Conread position:
               
228-417
               

               
Cow position:
               
chr13:17816007-17815811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
228-540
               

               
Cow position:
               
chr13:55315953-55316275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 269
               

               
Conread position:
               
228-549
               

               
Cow position:
               
chr13:34556096-34556407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr13:23667498-23667155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
229-466
               

               
Cow position:
               
chr13:18551683-18551436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr13:21210092-21209853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr13:9884998-9884749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
234-475
               

               
Cow position:
               
chr13:14220700-14220462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
234-478
               

               
Cow position:
               
chr13:51108719-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
234-485
               

               
Cow position:
               
chr13:54093970-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
234-548
               

               
Cow position:
               
chr13:24369815-24369490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
234-548
               

               
Cow position:
               
chr13:47963971-47964273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
234-551
               

               
Cow position:
               
chr13:11954884-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:60650690-60651001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr13:6060778-6061106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr13:12207273-12206950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 144
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr13:32657576-32657898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
235-478
               

               
Cow position:
               
chr13:39948190-39948441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
236-485
               

               
Cow position:
               
chr13:20041733-20042001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
236-549
               

               
Cow position:
               
chr13:4464235-4463919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 150
               

               
Conread position:
               
236-554
               

               
Cow position:
               
chr13:11767813-11768142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 288
               

               
Conread position:
               
239-485
               

               
Cow position:
               
chr13:9548916-9548662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 124
               

               
Conread position:
               
239-553
               

               
Cow position:
               
chr13:18852301-18851986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 86
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr13:15192669-15192984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 207
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr13:35718909-35719235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 266
               

               
Conread position:
               
239-556
               

               
Cow position:
               
chr13:11061212-11060887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 214
               

               
Conread position:
               
239-556
               

               
Cow position:
               
chr13:17347033-17346710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 258
               

               
Conread position:
               
239-558
               

               
Cow position:
               
chr13:33054170-33054475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
240-425
               

               
Cow position:
               
chr13:48944885-48944705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
240-473
               

               
Cow position:
               
chr13:20536724-20536484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
240-488
               

               
Cow position:
               
chr13:13504020-13504276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
240-551
               

               
Cow position:
               
chr13:1558308-1558610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 85
               

               
Conread position:
               
240-553
               

               
Cow position:
               
chr13:37818536-37818848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
240-554
               

               
Cow position:
               
chr13:20839792-20839468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 259
               

               
Conread position:
               
241-423
               

               
Cow position:
               
chr13:60393475-60393664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
241-476
               

               
Cow position:
               
chr13:6975567-6975817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 173
               

               
Conread position:
               
241-553
               

               
Cow position:
               
chr13:36877295-36876963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr13:10845815-10845506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr13:43868896-43869211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr13:45073713-45074012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
200, 66
               

               
Conread position:
               
243-425
               

               
Cow position:
               
chr13:22025480-22025674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr13:30026333-30026049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 255
               

               
Conread position:
               
243-553
               

               
Cow position:
               
chr13:17745460-17745151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 146
               

               
Conread position:
               
243-553
               

               
Cow position:
               
chr13:20679566-20679242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr13:5263065-5263379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 150
               

               
Conread position:
               
244-472
               

               
Cow position:
               
chr13:43812304-43812068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
244-485
               

               
Cow position:
               
chr13:11147526-11147272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
244-499
               

               
Cow position:
               
chr13:48372718-48372948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
244-517
               

               
Cow position:
               
chr13:26150771-26151033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
244-548
               

               
Cow position:
               
chr13:12202585-12202270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr13:9643662-9643985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr13:18491814-18491498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
244-557
               

               
Cow position:
               
chr13:54095025-54094709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
245-553
               

               
Cow position:
               
chr13:18172559-18172239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 254
               

               
Conread position:
               
245-554
               

               
Cow position:
               
chr13:15281717-15282033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 256
               

               
Conread position:
               
248-548
               

               
Cow position:
               
chr13:8245116-8245423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
248-548
               

               
Cow position:
               
chr13:37521516-37521836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 261
               

               
Conread position:
               
248-553
               

               
Cow position:
               
chr13:37804095-37803794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
250-517
               

               
Cow position:
               
chr13:2192922-2192650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
250-544
               

               
Cow position:
               
chr13:53195078-53195369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 180
               

               
Conread position:
               
250-556
               

               
Cow position:
               
chr13:52227886-52228200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 207
               

               
Conread position:
               
251-556
               

               
Cow position:
               
chr13:57475203-57475506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 248
               

               
Conread position:
               
253-537
               

               
Cow position:
               
chr13:60341025-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 253
               

               
Conread position:
               
254-553
               

               
Cow position:
               
chr13:51014970-51015275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
65, 203
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr13:37775017-37775305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
256-553
               

               
Cow position:
               
chr13:13339072-13338759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 249
               

               
Conread position:
               
257-552
               

               
Cow position:
               
chr13:48598111-48597813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr13:19022484-19022179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 244
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr13:46112173-46111871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 240
               

               
Conread position:
               
260-546
               

               
Cow position:
               
chr13:9593711-9593415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 239
               

               
Conread position:
               
260-554
               

               
Cow position:
               
chr13:19223853-19223557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
59, 241
               

               
Conread position:
               
260-554
               

               
Cow position:
               
chr13:37592734-37593045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 245
               

               
Conread position:
               
260-557
               

               
Cow position:
               
chr13:59170861-59170552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
265-547
               

               
Cow position:
               
chr13:61990135-61990416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
54, 188
               

               
Conread position:
               
265-548
               

               
Cow position:
               
chr13:15528829-15529129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 238
               

               
Conread position:
               
265-549
               

               
Cow position:
               
chr13:61188734-61188440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr13:24230412-24230116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 232
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr13:26369725-26369426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 235
               

               
Conread position:
               
265-557
               

               
Cow position:
               
chr13:23512558-23512269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
265-557
               

               
Cow position:
               
chr13:52749289-52749571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
266-548
               

               
Cow position:
               
chr13:547686-547401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
267-554
               

               
Cow position:
               
chr13:8652240-8652540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
268-440
               

               
Cow position:
               
chr13:56431709-56431880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
269-547
               

               
Cow position:
               
chr13:48165234-48165517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
168, 123
               

               
Conread position:
               
272-459
               

               
Cow position:
               
chr13:5079033-5079222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
273-554
               

               
Cow position:
               
chr13:15991031-15991328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
46, 217
               

               
Conread position:
               
273-554
               

               
Cow position:
               
chr13:21283515-21283802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
274-553
               

               
Cow position:
               
chr13:15195019-15195302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
274-557
               

               
Cow position:
               
chr13:9846264-9846563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
276-485
               

               
Cow position:
               
chr13:62474611-62474830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
277-546
               

               
Cow position:
               
chr13:55583386-55583105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
277-562
               

               
Cow position:
               
chr13:2404930-2404646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
278-554
               

               
Cow position:
               
chr13:14771647-14771354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
41, 229
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr13:47186409-47186142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
279-553
               

               
Cow position:
               
chr13:17338619-17338332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
280-548
               

               
Cow position:
               
chr13:6540129-6540408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
281-553
               

               
Cow position:
               
chr13:11644116-11643842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
285-552
               

               
Cow position:
               
chr13:39232660-39232921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
285-556
               

               
Cow position:
               
chr13:5758166-5758442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
286-544
               

               
Cow position:
               
chr13:49022692-49022956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
286-548
               

               
Cow position:
               
chr13:5671423-5671678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
141, 24
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr13:49503350-49503629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
286-554
               

               
Cow position:
               
chr13:52055418-52055690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
287-554
               

               
Cow position:
               
chr13:15110501-15110216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 220
               

               
Conread position:
               
293-545
               

               
Cow position:
               
chr13:15903183-15902935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
294-502
               

               
Cow position:
               
chr13:7790184-7789960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
294-520
               

               
Cow position:
               
chr13:4420517-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 208
               

               
Conread position:
               
294-542
               

               
Cow position:
               
chr13:29831269-29831518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
294-546
               

               
Cow position:
               
chr13:5060911-5060657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 160
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr13:14870692-14870476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr13:966234-966002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
299-482
               

               
Cow position:
               
chr13:28652959-28652773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
299-548
               

               
Cow position:
               
chr13:5082810-5082559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:54583037-54582771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
300-485
               

               
Cow position:
               
chr13:22030252-22030065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
302-546
               

               
Cow position:
               
chr13:49507692-49507940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
304-556
               

               
Cow position:
               
chr13:27493691-27493957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr13:52929861-52929619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
308-554
               

               
Cow position:
               
chr13:18999694-18999437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
312-508
               

               
Cow position:
               
chr13:10098843-10099040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 176
               

               
Conread position:
               
316-496
               

               
Cow position:
               
chr13:28696225-28696044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 173
               

               
Conread position:
               
316-548
               

               
Cow position:
               
chr13:11381578-11381815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
316-551
               

               
Cow position:
               
chr13:8555607-8555367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 180
               

               
Conread position:
               
316-554
               

               
Cow position:
               
chr13:43829396-43829146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
317-507
               

               
Cow position:
               
chr13:36346114-36345916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
317-522
               

               
Cow position:
               
chr13:20128808-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
317-536
               

               
Cow position:
               
chr13:13954245-13954473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 181
               

               
Conread position:
               
317-537
               

               
Cow position:
               
chr13:4487681-4487905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
317-538
               

               
Cow position:
               
chr13:19180251-19180476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 209
               

               
Conread position:
               
317-542
               

               
Cow position:
               
chr13:30665774-30666001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
317-544
               

               
Cow position:
               
chr13:53070027-53070249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
317-546
               

               
Cow position:
               
chr13:17150550-17150333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr13:25496149-25495914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 178
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr13:17966066-17966301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr13:18696985-18696748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr13:6849073-6848833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr13:26698354-26698594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr13:39368098-39367863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr13:62601148-62600911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:607122-607355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:1363837-1363597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:6931058-6930818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:17568956-17569198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:20473548-20473779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:28689609-28689370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr13:54388878-54389118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:8374629-8374870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 175
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:9900292-9900061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:19581944-19582181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 169
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:25604483-25604711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:28552739-28552490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 184
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr13:37640729-37640491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
317-555
               

               
Cow position:
               
chr13:7488682-7488442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr13:6441957-6442206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr13:20360413-20360178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr13:38033825-38033576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr13:19188444-19188199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
50, 178
               

               
Conread position:
               
318-549
               

               
Cow position:
               
chr13:2823001-2822777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr13:18058107-18058347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
318-557
               

               
Cow position:
               
chr13:3160533-3160299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
318-557
               

               
Cow position:
               
chr13:49520680-49520923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 128
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr13:16711771-16711578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
320-552
               

               
Cow position:
               
chr13:21269440-21269678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
45, 175
               

               
Conread position:
               
320-553
               

               
Cow position:
               
chr13:13238717-13238480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
321-515
               

               
Cow position:
               
chr13:26743262-26743067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
321-547
               

               
Cow position:
               
chr13:11321477-11321708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
321-548
               

               
Cow position:
               
chr13:51115889-51116116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
322-557
               

               
Cow position:
               
chr13:12200949-12201190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
323-554
               

               
Cow position:
               
chr13:6663614-6663850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
324-554
               

               
Cow position:
               
chr13:2803604-2803376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
326-553
               

               
Cow position:
               
chr13:14878818-14879048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
328-500
               

               
Cow position:
               
chr13:10013626-10013448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
328-562
               

               
Cow position:
               
chr13:49796149-49795926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
330-489
               

               
Cow position:
               
chr13:13809429-13809598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
330-550
               

               
Cow position:
               
chr13:12745801-12745578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr13:6389510-6389298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr13:18929661-18929431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 168
               

               
Conread position:
               
330-562
               

               
Cow position:
               
chr13:25381092-25380857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr13:11591875-11591653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
336-553
               

               
Cow position:
               
chr13:39826677-39826460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr13:50713325-50713113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
337-554
               

               
Cow position:
               
chr13:1569046-1568834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 142
               

               
Conread position:
               
339-553
               

               
Cow position:
               
chr13:34555711-34555925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr13:21668808-21668600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
341-553
               

               
Cow position:
               
chr13:15194613-15194832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
341-554
               

               
Cow position:
               
chr13:14576325-14576115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
341-554
               

               
Cow position:
               
chr13:18995247-18995028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
342-547
               

               
Cow position:
               
chr13:21135782-21135996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
342-553
               

               
Cow position:
               
chr13:27550857-27550642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
343-466
               

               
Cow position:
               
chr13:55947891-55947761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
343-551
               

               
Cow position:
               
chr13:19240553-19240335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 209
               

               
Conread position:
               
344-537
               

               
Cow position:
               
chr13:20357777-20357974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
345-557
               

               
Cow position:
               
chr13:51901703-51901483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
346-554
               

               
Cow position:
               
chr13:56678129-56677917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
349-548
               

               
Cow position:
               
chr13:19320646-19320440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
349-549
               

               
Cow position:
               
chr13:19279202-19279002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
349-554
               

               
Cow position:
               
chr13:47322293-47322508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 152
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr13:49476199-49475977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr13:50750946-50751153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
352-554
               

               
Cow position:
               
chr13:8667721-8667521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
353-546
               

               
Cow position:
               
chr13:46329498-46329696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
353-554
               

               
Cow position:
               
chr13:55728006-55727804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
358-548
               

               
Cow position:
               
chr13:3989305-3989106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
362-546
               

               
Cow position:
               
chr13:7332902-7333097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
363-537
               

               
Cow position:
               
chr13:16038196-16038367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
363-553
               

               
Cow position:
               
chr13:52070912-52070732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr13:12245142-12245326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr13:54128496-54128694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr13:23522034-23521847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
365-549
               

               
Cow position:
               
chr13:53553168-53553355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
365-549
               

               
Cow position:
               
chr13:60389393-60389581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
366-552
               

               
Cow position:
               
chr13:17498311-17498120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
366-554
               

               
Cow position:
               
chr13:49457767-49457586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
366-557
               

               
Cow position:
               
chr13:56034765-56034960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
367-554
               

               
Cow position:
               
chr13:53330364-53330180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
368-552
               

               
Cow position:
               
chr13:16187806-16187992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
369-547
               

               
Cow position:
               
chr13:46044247-46044069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
369-552
               

               
Cow position:
               
chr13:20137915-20137725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
369-554
               

               
Cow position:
               
chr13:3211642-3211451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
369-554
               

               
Cow position:
               
chr13:43893238-43893421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
369-555
               

               
Cow position:
               
chr13:9385937-9386120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr13:7998438-7998255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
376-554
               

               
Cow position:
               
chr13:17838034-17837852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
381-558
               

               
Cow position:
               
chr13:19778770-19778955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
382-548
               

               
Cow position:
               
chr13:17089446-17089612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr13:827316-827147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
387-554
               

               
Cow position:
               
chr13:17563809-17563641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
390-554
               

               
Cow position:
               
chr13:33974798-33974636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
390-556
               

               
Cow position:
               
chr13:5006062-5005901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
396-554
               

               
Cow position:
               
chr13:62008176-62008009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
396-556
               

               
Cow position:
               
chr13:51227679-51227840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
399-553
               

               
Cow position:
               
chr13:25428167-25428320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
401-551
               

               
Cow position:
               
chr13:12673240-12673390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
402-556
               

               
Cow position:
               
chr13:19183924-19183768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
410-547
               

               
Cow position:
               
chr13:9117526-9117661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
410-552
               

               
Cow position:
               
chr13:6342043-6342184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
410-557
               

               
Cow position:
               
chr13:52640900-52641049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
415-551
               

               
Cow position:
               
chr13:18340575-18340438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
415-554
               

               
Cow position:
               
chr13:15143805-15143940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chr13:6183387-6183518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
425-554
               

               
Cow position:
               
chr13:15069985-15069860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
427-552
               

               
Cow position:
               
chr13:8233023-8232906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr13:51856858-51856983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr13:60393811-60393686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
427-557
               

               
Cow position:
               
chr13:41157432-41157304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
429-554
               

               
Cow position:
               
chr13:54145450-54145571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
431-551
               

               
Cow position:
               
chr13:17813494-17813376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
432-554
               

               
Cow position:
               
chr13:18517068-18516948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
434-554
               

               
Cow position:
               
chr13:6926538-6926419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
434-554
               

               
Cow position:
               
chr13:19750737-19750617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
436-552
               

               
Cow position:
               
chr13:16908235-16908121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
437-554
               

               
Cow position:
               
chr13:47243538-47243649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
438-554
               

               
Cow position:
               
chr13:52536580-52536464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
438-556
               

               
Cow position:
               
chr13:55765162-55765280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
441-554
               

               
Cow position:
               
chr13:40493934-40493825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
442-546
               

               
Cow position:
               
chr13:15997046-15996944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
442-554
               

               
Cow position:
               
chr13:20520073-20519963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
443-554
               

               
Cow position:
               
chr13:24110491-24110382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
444-557
               

               
Cow position:
               
chr13:49356039-49356150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
458-554
               

               
Cow position:
               
chr13:21295071-21294977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.